Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for irx4a

Gene Name Gene ID Reads Annotation
irx4a ENSDARG00000035648 71 iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]










Genes with expression patterns similar to irx4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irx4a ENSDARG00000035648 71 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
2. CABZ01081747.2 CABZ01081747.2 9 1.925 - - - - - 1.000 0.925 - -
3. crfb16 ENSDARG00000075181 40 1.777 - - - - 0.777 1.000 - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
4. si:ch73-189n23.1 ENSDARG00000086247 15 1.747 - - 0.747 - - - 1.000 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
5. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1.734 - - 0.734 - - 1.000 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
6. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1.715 - - - - - 1.000 - - 0.715 solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
7. BX510934.1 ENSDARG00000087544 140 1.702 - - - - - 0.759 0.943 - -
8. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1.688 - - - - - 0.819 0.869 - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
9. samd7 ENSDARG00000060354 15 1.63 - - - - - - - 0.806 0.824 sterile alpha motif domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-549]
10. ocstamp ENSDARG00000022139, ENSDARG00000114094 12 1.594 - - 0.704 - - - 0.890 - - osteoclast stimulatory transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-050327-65]
11. fam19a4b ENSDARG00000062471 3 1.587 - - - - - - - 0.720 0.867 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4b [Source:ZFIN;Acc:ZDB-GENE-061013-164]
12. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.582 - - - - - - - 0.706 0.876 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
13. nkx2.1a nkx2.1a 156 1.545 - - - - - - - 0.760 0.785
14. ptf1a ENSDARG00000014479 349 1.543 - - - - - - - 0.715 0.828 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
15. npb ENSDARG00000078828 230 1.52 - - - - - - 0.801 - 0.719 neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
16. Metazoa_SRP_20 Metazoa_SRP_20 2 1.484 - - 0.747 - - 0.737 - - -
17. si:dkey-20i20.8 ENSDARG00000071714, ENSDARG00000094343 41 1.482 - - - - - 0.722 0.760 - - si:dkey-20i20.8 [Source:ZFIN;Acc:ZDB-GENE-060503-59]
18. TCF24 ENSDARG00000086944 518 1.459 - - - - - - - 0.712 0.747 transcription factor 24 [Source:HGNC Symbol;Acc:HGNC:32275]
19. cpne5a ENSDARG00000061466, ENSDARG00000111461 105 1.452 - - - - 0.729 - 0.723 - - copine Va [Source:ZFIN;Acc:ZDB-GENE-081105-9]
20. atoh7 ENSDARG00000069552 254 1.439 - - - - - - - 0.706 0.733 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
21. BX511021.2 ENSDARG00000097646 5 1 - - - - - - 1.000 - -
22. CABZ01061914.2 CABZ01061914.2 2 1 - - - - - 1.000 - - -
23. pigr ENSDARG00000101890 10 1 - - - - - - 1.000 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
24. soul5l ENSDARG00000089879 20 1 - - - - - 1.000 - - - heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
25. si:dkey-47k20.6 si:dkey-47k20.6 2 1 - - - - - - 1.000 - -
26. il11a ENSDARG00000037859 5 1 - - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
27. phf21aa ENSDARG00000006878 31 1 - - - - - - 1.000 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
28. BX120005.1 ENSDARG00000089327 1 1 - - - - - 1.000 - - - cytotoxic and regulatory T-cell molecule [Source:NCBI gene;Acc:101884219]
29. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - - - 1.000 - -
30. APOBEC2 APOBEC2 9 1 - - - - - 1.000 - - -
31. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - - - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
32. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - 1.000 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
33. PGBD4_4 PGBD4_4 15 1 - - - - - - 1.000 - -
34. fut7 ENSDARG00000044775 25 1 - - - - - 1.000 - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
35. dbpa ENSDARG00000063014 107 1 - - - - - - 1.000 - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
36. XKR8 XKR8 9 1 - - - - - - 1.000 - -
37. CU104716.2 CU104716.2 10 1 - - - - - - 1.000 - -
38. hsd3b1 ENSDARG00000069926 35 1 - - - - - 1.000 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
39. GPR20 ENSDARG00000077427 1 1 - - - - - 1.000 - - - G protein-coupled receptor 20 [Source:ZFIN;Acc:ZDB-GENE-140106-136]
40. si:dkey-16p6.1_2 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 1 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
41. trpm3 ENSDARG00000039181 2 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
42. zp2.5 ENSDARG00000086522 15 1 - - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
43. cyp2n13 ENSDARG00000042953 10 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
44. U1_35 U1_35 1 1 - - - - - - 1.000 - -
45. pdca ENSDARG00000011886 1 1 - - - - - 1.000 - - - phosducin a [Source:ZFIN;Acc:ZDB-GENE-031023-1]
46. si:dkey-122c11.1 ENSDARG00000093747 19 1 - - - - - - 1.000 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
47. FNDC3B FNDC3B 2 1 - - - - - 1.000 - - -
48. fam19a1 7 1 - - - - - 1.000 - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
49. fbxo32 ENSDARG00000040277 93 1 - - - - - - 1.000 - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
50. grtp1b ENSDARG00000030269 24 1 - - - - - - 1.000 - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
51. si:ch73-285p12.4 ENSDARG00000054548 1 1 - - - - - 1.000 - - - si:ch73-285p12.4 [Source:ZFIN;Acc:ZDB-GENE-110411-145]
52. apnl ENSDARG00000090900 21 1 - - - - - 1.000 - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
53. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - 1.000 - - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
54. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 1 - - - - - 1.000 - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
55. DTX4_1 ENSDARG00000076302 31 1 - - - - - 1.000 - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
56. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - 1.000 - -
57. crhb ENSDARG00000027657 9 1 - - - - - 1.000 - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
58. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - - - - - - 1.000 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
59. Metazoa_SRP_13 Metazoa_SRP_13 7 1 - - - - - 1.000 - - -
60. CR762480.5 CR762480.5 1 1 - - - - - - 1.000 - -
61. lratb 3 1 - - - - - - 1.000 - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
62. si:dkey-148e22.3 si:dkey-148e22.3 4 1 - - - - - - 1.000 - -
63. gdf6b ENSDARG00000005510 106 1 - - - - - 1.000 - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
64. zgc:152938 ENSDARG00000102586 97 1 - - - - - - 1.000 - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
65. b3gat3 ENSDARG00000001939 58 1 - - - - - - 1.000 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
66. cx55.5 13 1 - - - - - - 1.000 - - connexin 55.5, transcript variant X1
67. top3b ENSDARG00000027586 8 1 - - - - - - 1.000 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
68. si:ch73-77n15.1 si:ch73-77n15.1 2 1 - - - - - - 1.000 - -
69. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - - - - 1.000 - - -
70. CR854891.1 CR854891.1 7 1 - - - - - - 1.000 - -
71. si:dkeyp-91h9.1 si:dkeyp-91h9.1 2 1 - - - - - - 1.000 - -
72. zgc:173443 ENSDARG00000034403 26 1 - - - - - - 1.000 - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
73. CELA1 CELA1 14 1 - - - - - - 1.000 - -
74. ADAMTS15_1 ADAMTS15_1 11 1 - - - - - 1.000 - - -
75. f8 ENSDARG00000101385 1 1 - - - - - 1.000 - - - coagulation factor VIII, procoagulant component [Source:ZFIN;Acc:ZDB-GENE-090629-2]
76. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1 - - - - - - 1.000 - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
77. traf1 ENSDARG00000069482 50 1 - - - - - - 1.000 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
78. si:ch211-190k17.13 si:ch211-190k17.13 48 1 - - - - - - 1.000 - -
79. urgcp ENSDARG00000036767 6 1 - - - - - - 1.000 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
80. avpr2aa ENSDARG00000007436 43 1 - - - - - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
81. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - 1.000 - - -
82. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - - - - - - 1.000 - -
83. pdcb ENSDARG00000017634 10 1 - - - - - - 1.000 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
84. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - - 1.000 - - -
85. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - 1.000 - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
86. C25H12orf29 C25H12orf29 31 1 - - - - - - 1.000 - -
87. wnt3a ENSDARG00000058822 5 1 - - - - - - 1.000 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
88. grk7b ENSDARG00000055534 17 1 - - - - - - 1.000 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
89. wdr21 ENSDARG00000003197, ENSDARG00000110654 4 1 - - - - - 1.000 - - - WD repeat domain 21 [Source:ZFIN;Acc:ZDB-GENE-040109-2]
90. ipp ENSDARG00000075339 3 1 - - - - - 1.000 - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
91. srd5a3 ENSDARG00000043307 142 1 - - - - - 1.000 - - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
92. sema4aa ENSDARG00000077103 4 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Aa [Source:ZFIN;Acc:ZDB-GENE-110411-86]
93. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1 - - - - - - 1.000 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
94. ctc1 ENSDARG00000070119 8 1 - - - - - 1.000 - - - CTS telomere maintenance complex component 1 [Source:ZFIN;Acc:ZDB-GENE-061103-271]
95. nanog ENSDARG00000075113 10 1 - - - - - - 1.000 - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
96. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - 1.000 - - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
97. EBF3 EBF3 16 1 - - - - - 1.000 - - -
98. pxn pxn 10 1 - - - - - - 1.000 - -
99. ubr1 ENSDARG00000060480 71 1 - - - - - - 1.000 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
100. irgq2 ENSDARG00000068657 4 1 - - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]

There are 649 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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