Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hmgcs1

Gene Name Gene ID Reads Annotation
hmgcs1 ENSDARG00000103025 231 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1042]










Genes with expression patterns similar to hmgcs1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmgcs1 ENSDARG00000103025 231 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1042]
2. zgc:101640 733 2.417 - 0.710 - - - 0.761 - 0.946 - zgc:101640, transcript variant X2
3. MEGF9 MEGF9 482 1.818 - 0.877 - - - - - 0.941 -
4. ripk4 ENSDARG00000043211 775 1.769 - - - - - - 0.850 0.919 - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
5. ADAMTSL3 ENSDARG00000027903 278 1.759 - - - - - - - 0.906 0.853 ADAMTS-like 3 [Source:ZFIN;Acc:ZDB-GENE-121030-8]
6. si:dkey-30c15.13 ENSDARG00000069524, ENSDARG00000114258 403 1.721 - 0.884 - - - - - 0.837 - si:dkey-30c15.13 [Source:ZFIN;Acc:ZDB-GENE-060503-73]
7. snx8a ENSDARG00000074842 411 1.717 - - - - - - - 0.927 0.790 sorting nexin 8a [Source:ZFIN;Acc:ZDB-GENE-031202-1]
8. layna ENSDARG00000035169 515 1.709 - 0.853 - - - - - - 0.856 layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
9. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 1.694 - - - - - 0.758 - 0.936 - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
10. rhbdl2 ENSDARG00000069833, ENSDARG00000109477 891 1.69 - - - - - - - 0.886 0.804 rhomboid, veinlet-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-732]
11. CABIN1 ENSDARG00000079326 905 1.684 - 0.904 - - - - - - 0.780 calcineurin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1735]
12. st3gal2l st3gal2l 393 1.679 - 0.844 - - - 0.835 - - -
13. mark2b ENSDARG00000032458 821 1.676 - 0.821 - - - - - 0.855 - MAP/microtubule affinity-regulating kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080215-4]
14. mybl2 mybl2 1341 1.666 - 0.765 - - - - - 0.901 -
15. zgc:162780 ENSDARG00000069548 340 1.665 - 0.769 - - - - - 0.896 - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
16. CEP170B ENSDARG00000074636 336 1.664 - 0.919 - - - - - - 0.745 centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
17. CR762484.3 CR762484.3 395 1.657 - 0.877 - - - - - - 0.780
18. dopey2 1088 1.653 - - - - - 0.789 - 0.864 - dopey family member 2, transcript variant X2
19. bdh1 ENSDARG00000059388 3390 1.641 - 0.845 - - - - - - 0.796 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
20. slc27a1b ENSDARG00000038352, ENSDARG00000104949 298 1.639 - - - - - - - 0.920 0.719 solute carrier family 27 (fatty acid transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]
21. fn1b ENSDARG00000006526 9542 1.609 - 0.800 - - - 0.809 - - - fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
22. si:dkey-253d23.4 ENSDARG00000079762 1560 1.604 - 0.900 - - - - - - 0.704 si:dkey-253d23.4 [Source:ZFIN;Acc:ZDB-GENE-050208-730]
23. DST ENSDARG00000101858 4395 1.601 - 0.732 - - - - - 0.869 - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
24. si:ch211-149a19.3 ENSDARG00000079456 115 1.596 - 0.876 - - - - 0.720 - - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
25. mst4 mst4 1672 1.589 - 0.761 - - - - - - 0.828
26. CR318593.1 CR318593.1 290 1.561 - - - - - - 0.741 - 0.820
27. nek6 ENSDARG00000037963 316 1.546 - - - - - 0.722 - - 0.824 NIMA-related kinase 6 [Source:ZFIN;Acc:ZDB-GENE-040724-133]
28. rgs5a ENSDARG00000002644, ENSDARG00000114979 564 1.544 - - - - - 0.831 - - 0.713 regulator of G protein signaling 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7570]
29. MTUS1 MTUS1 1334 1.541 - 0.828 - - - - - - 0.713
30. esyt3 ENSDARG00000006422 335 1.54 0.764 - - - - - - - 0.776 extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
31. ralaa ENSDARG00000045463 792 1.537 - 0.776 - - - - - 0.761 - v-ral simian leukemia viral oncogene homolog Aa (ras related) [Source:ZFIN;Acc:ZDB-GENE-040426-1344]
32. stard8 ENSDARG00000014003, ENSDARG00000114410 1237 1.537 - 0.764 - - - - - 0.773 - StAR-related lipid transfer (START) domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-9447]
33. LPHN1 LPHN1 152 1.53 - 0.774 - - - - 0.756 - -
34. C7H20orf27 C7H20orf27 1864 1.518 - 0.736 - - - 0.782 - - -
35. nfxl1 ENSDARG00000070127 392 1.5 0.777 - - - - - - 0.723 - nuclear transcription factor, X-box binding-like 1 [Source:ZFIN;Acc:ZDB-GENE-110411-178]
36. sqrdl 1598 1.493 - 0.733 - - - - - - 0.760 sulfide quinone reductase-like (yeast), transcript variant X2
37. sid4 sid4 1358 1.476 - 0.736 - - - 0.740 - - -
38. ttll12 ENSDARG00000103537 364 1.475 0.750 - - - - - - - 0.725 tubulin tyrosine ligase-like family, member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-697]
39. CPN2 CPN2 682 1.474 - 0.772 - - - - 0.702 - -
40. dnajb6b ENSDARG00000020953, ENSDARG00000110048 446 1.463 - - - - - - 0.736 0.727 - DnaJ (Hsp40) homolog, subfamily B, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-1122]
41. impad1 ENSDARG00000058114 667 1.449 - 0.740 - - - 0.709 - - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
42. cyp24a1 ENSDARG00000103277 181 1.446 - 0.737 - - - 0.709 - - - cytochrome P450, family 24, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-060825-1]
43. exosc6 ENSDARG00000036060, ENSDARG00000115735 531 0.965 - - - - - - - 0.965 - exosome component 6 [Source:ZFIN;Acc:ZDB-GENE-050522-362]
44. MRVI1 ENSDARG00000074602 443 0.959 - - - - - - - 0.959 - murine retrovirus integration site 1 homolog [Source:ZFIN;Acc:ZDB-GENE-120221-4]
45. igdcc4 ENSDARG00000076919 1303 0.954 - - - - - - - 0.954 - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
46. pet112 pet112 223 0.954 - - - - - - - 0.954 -
47. vps18 ENSDARG00000070433 320 0.951 - 0.951 - - - - - - - vacuolar protein sorting 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-33]
48. CABZ01039859.1 ENSDARG00000076361 540 0.948 - - - - - - - 0.948 - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
49. MYLK4 MYLK4 180 0.948 - - - - - - - 0.948 -
50. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 0.948 - - - - - - - 0.948 - ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
51. CU693494.3 CU693494.3 169 0.947 - - - - - - - 0.947 -
52. zcchc9 ENSDARG00000007531 1748 0.947 - - - - - - - 0.947 - zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
53. CABZ01087562.1 CABZ01087562.1 80 0.947 - - - - - - - 0.947 -
54. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.946 - - - - - - - 0.946 - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
55. CR936337.1 CR936337.1 38 0.945 - - - - - - - 0.945 -
56. BX682234.2 BX682234.2 28 0.945 - - - - - - - 0.945 -
57. FCHSD2 FCHSD2 35 0.945 - - - - - - - 0.945 -
58. si:ch73-67c22.3 si:ch73-67c22.3 30 0.945 - - - - - - - 0.945 -
59. CR848836.5 CR848836.5 42 0.945 - - - - - - - 0.945 -
60. si:ch211-254c8.2 233 0.945 - - - - - - - 0.945 - si:ch211-254c8.2, transcript variant X4
61. JAKMIP3 ENSDARG00000100708 56 0.945 - - - - - - - 0.945 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
62. mgat2 ENSDARG00000052408 264 0.944 - - - - - - - 0.944 - mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-54]
63. htra3a ENSDARG00000052895 28 0.944 - - - - - - - 0.944 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
64. si:ch211-106h4.9 ENSDARG00000075706 36 0.944 - - - - - - - 0.944 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
65. si:ch211-67e16.2 41 0.944 - - - - - - - 0.944 - si:ch211-67e16.2, transcript variant X2
66. gcdhl gcdhl 38 0.944 - - - - - - - 0.944 -
67. sv2ba ENSDARG00000057427 33 0.944 - - - - - - - 0.944 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
68. si:dkey-29n10.3 si:dkey-29n10.3 66 0.943 - - - - - - - 0.943 -
69. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.942 - - - - - - - 0.942 - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
70. chrna2b ENSDARG00000057025 217 0.942 - - - - - - - 0.942 - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
71. cx28.8 ENSDARG00000071042 62 0.942 - - - - - - - 0.942 - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
72. styx ENSDARG00000057699 48 0.941 - - - - - - - 0.941 - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
73. rab20 ENSDARG00000005049 346 0.941 - - - - - - - 0.941 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
74. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.941 - - - - - - - 0.941 - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
75. mlh1 ENSDARG00000025948 130 0.941 - - - - - - - 0.941 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
76. rint1 ENSDARG00000005547 898 0.94 - - - - - - - 0.940 - RAD50 interactor 1 [Source:ZFIN;Acc:ZDB-GENE-041210-174]
77. CABZ01114089.1 CABZ01114089.1 127 0.94 - - - - - - - 0.940 -
78. pggt1b ENSDARG00000103464 441 0.939 - - - - - - - 0.939 - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
79. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 0.939 - - - - - - - 0.939 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
80. mknk1 ENSDARG00000018411 749 0.939 - - - - - - - 0.939 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
81. aars2 ENSDARG00000107385 190 0.939 - - - - - - - 0.939 - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
82. si:dkey-10g2.5 si:dkey-10g2.5 72 0.939 - - - - - - - 0.939 -
83. dnah9l ENSDARG00000062630 268 0.939 - - - - - - - 0.939 - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
84. BX649281.3 BX649281.3 808 0.937 - 0.937 - - - - - - -
85. phf16 phf16 1116 0.937 - - - - - - - 0.937 -
86. fance ENSDARG00000068870 155 0.935 - - - - - - - 0.935 - FA complementation group E [Source:ZFIN;Acc:ZDB-GENE-060510-5]
87. trabd ENSDARG00000010445 195 0.935 - - - - - - - 0.935 - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
88. TMEM116 TMEM116 96 0.935 - - - - - - - 0.935 -
89. fbxo7 ENSDARG00000099833 304 0.934 - - - - - - - 0.934 - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
90. si:dkey-266m15.6 ENSDARG00000078508 490 0.934 - - - - - - - 0.934 - si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]
91. CU234171.2 CU234171.2 86 0.934 - - - - - - - 0.934 -
92. cacnb2a ENSDARG00000099045 374 0.934 - - - - - - - 0.934 - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
93. enosf1 ENSDARG00000038359 209 0.933 - - - - - - - - 0.933 enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
94. rad23aa ENSDARG00000020001 374 0.932 - - - - - - - 0.932 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
95. si:dkey-11f4.16 ENSDARG00000099799 121 0.932 - - - - - - - 0.932 - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
96. phf19 ENSDARG00000078050 117 0.932 - - - - - - - 0.932 - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
97. rbm27 ENSDARG00000060521 185 0.931 - - - - - - - 0.931 - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
98. slc2a8 ENSDARG00000104278 764 0.931 - - - - - - - 0.931 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
99. zgc:194470 zgc:194470 210 0.93 - - - - - - - 0.930 -
100. CACHD1 ENSDARG00000061590 1287 0.929 - - - - - - - 0.929 - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]

There are 1210 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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