Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hmbox1b

Gene Name Gene ID Reads Annotation
hmbox1b 597 homeobox containing 1 b, transcript variant X3










Genes with expression patterns similar to hmbox1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmbox1b 597 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 homeobox containing 1 b, transcript variant X3
2. swt1 ENSDARG00000094010 472 1.573 - - - 0.773 - - - 0.800 - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
3. si:dkey-183n20.2 si:dkey-183n20.2 210 1.547 - - - 0.753 - - - 0.794 -
4. PAOX PAOX 251 1.514 - - - 0.802 - - - 0.712 -
5. NTAN1 ENSDARG00000105182 844 1.466 - - - 0.742 - 0.724 - - - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
6. CT573468.1 CT573468.1 283 0.998 - 0.998 - - - - - - -
7. trappc4 ENSDARG00000027418 1491 0.997 - 0.997 - - - - - - - trafficking protein particle complex 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1734]
8. ing5b ENSDARG00000068175 2502 0.996 - 0.996 - - - - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
9. prrc1 ENSDARG00000044304 1567 0.996 - 0.996 - - - - - - - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
10. sh3glb1 sh3glb1 1335 0.995 - 0.995 - - - - - - -
11. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 0.995 - 0.995 - - - - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
12. zc3h15 ENSDARG00000015889 3861 0.994 - 0.994 - - - - - - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
13. akirin2 ENSDARG00000058729 13245 0.993 - 0.993 - - - - - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
14. kdm8 ENSDARG00000102512 321 0.991 - 0.991 - - - - - - - lysine (K)-specific demethylase 8 [Source:ZFIN;Acc:ZDB-GENE-040718-411]
15. CTIF ENSDARG00000090617 270 0.991 - 0.991 - - - - - - - CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
16. HEATR6 ENSDARG00000073686 241 0.991 - 0.991 - - - - - - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
17. GRAMD1B GRAMD1B 311 0.991 - 0.991 - - - - - - -
18. pah ENSDARG00000020143 1551 0.991 - 0.991 - - - - - - - phenylalanine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031006-2]
19. tmem110 497 0.991 - 0.991 - - - - - - - transmembrane protein 110
20. si:ch211-271g18.4 ENSDARG00000115564 197 0.991 - 0.991 - - - - - - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
21. ddx3 ddx3 4076 0.991 - 0.991 - - - - - - -
22. dnajb5 ENSDARG00000052881, ENSDARG00000116664 885 0.991 - 0.991 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 5 [Source:ZFIN;Acc:ZDB-GENE-070705-308]
23. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 0.991 - 0.991 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
24. C13H10orf54 C13H10orf54 450 0.991 - 0.991 - - - - - - -
25. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.991 - 0.991 - - - - - - - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
26. prmt6 ENSDARG00000069706 484 0.991 - 0.991 - - - - - - - protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
27. mxf ENSDARG00000026049 195 0.991 - 0.991 - - - - - - - myxovirus (influenza virus) resistance F [Source:ZFIN;Acc:ZDB-GENE-030721-9]
28. supt20 ENSDARG00000078658 713 0.991 - 0.991 - - - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
29. farp1 ENSDARG00000074381 406 0.991 - 0.991 - - - - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
30. acmsd ENSDARG00000062549 201 0.991 - 0.991 - - - - - - - aminocarboxymuconate semialdehyde decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-103]
31. sgce ENSDARG00000012138 912 0.991 - 0.991 - - - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
32. nrd1 nrd1 324 0.991 - 0.991 - - - - - - -
33. ITFG1 ENSDARG00000075584, ENSDARG00000110264 615 0.991 - 0.991 - - - - - - - integrin alpha FG-GAP repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-121003-3]
34. ncam1b ENSDARG00000007220 233 0.991 - 0.991 - - - - - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
35. adm2a ENSDARG00000045708, ENSDARG00000111740 246 0.991 - 0.991 - - - - - - - adrenomedullin 2a [Source:ZFIN;Acc:ZDB-GENE-041210-100]
36. ENSDARG00000096553 ENSDARG00000096553 388 0.991 - 0.991 - - - - - - -
37. prkab1a ENSDARG00000044183 264 0.991 - 0.991 - - - - - - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
38. traf4b ENSDARG00000038964 346 0.991 - 0.991 - - - - - - - tnf receptor-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-040305-2]
39. olfm2a ENSDARG00000077847 230 0.991 - 0.991 - - - - - - - olfactomedin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2882]
40. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 0.99 - 0.990 - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
41. STARD7 ENSDARG00000074858 889 0.99 - 0.990 - - - - - - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
42. SLC12A6 SLC12A6 883 0.99 - 0.990 - - - - - - -
43. ypel1 ENSDARG00000035630, ENSDARG00000112717 739 0.99 - 0.990 - - - - - - - yippee-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-41]
44. si:ch211-129c21.1 ENSDARG00000024775 371 0.99 - 0.990 - - - - - - - si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
45. dse ENSDARG00000017988 2169 0.99 - 0.990 - - - - - - - dermatan sulfate epimerase [Source:ZFIN;Acc:ZDB-GENE-041001-202]
46. si:ch211-133l11.10 ENSDARG00000005626 381 0.99 - 0.990 - - - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
47. CR293507.1 ENSDARG00000112572 3198 0.99 - 0.990 - - - - - - -
48. SLC6A16_1 SLC6A16_1 1130 0.99 - 0.990 - - - - - - -
49. nucb2b ENSDARG00000036291 911 0.99 - 0.990 - - - - - - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
50. marveld2a ENSDARG00000025076 917 0.989 - 0.989 - - - - - - - MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
51. snx16 ENSDARG00000046072 931 0.989 - 0.989 - - - - - - - sorting nexin 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1832]
52. PDPR ENSDARG00000103288 711 0.989 - 0.989 - - - - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
53. C19H1orf85 C19H1orf85 1587 0.989 - 0.989 - - - - - - -
54. mapk12a ENSDARG00000042021 1573 0.989 - 0.989 - - - - - - - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
55. CASK CASK 1750 0.989 - 0.989 - - - - - - -
56. CABZ01057907.1 CABZ01057907.1 1140 0.989 - 0.989 - - - - - - -
57. SMARCA1 ENSDARG00000012776 673 0.989 - 0.989 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
58. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.989 - 0.989 - - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
59. gle1 ENSDARG00000043559 1362 0.989 - 0.989 - - - - - - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
60. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 0.989 - 0.989 - - - - - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
61. gtf2f1 ENSDARG00000032129 3041 0.989 - 0.989 - - - - - - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
62. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.989 - 0.989 - - - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
63. KIF2A ENSDARG00000043571 1560 0.989 - 0.989 - - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
64. lpar2b ENSDARG00000042561 1086 0.989 - 0.989 - - - - - - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
65. zgc:113625 ENSDARG00000054160 276 0.989 - 0.989 - - - - - - - zgc:113625 [Source:ZFIN;Acc:ZDB-GENE-050320-47]
66. amot ENSDARG00000078335 1757 0.988 - 0.988 - - - - - - - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
67. cdkn3 ENSDARG00000039130 1051 0.988 - 0.988 - - - - - - - cyclin-dependent kinase inhibitor 3 [Source:ZFIN;Acc:ZDB-GENE-060427-2]
68. wu:fb12e11 wu:fb12e11 2332 0.988 - 0.988 - - - - - - -
69. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 0.988 - 0.988 - - - - - - - SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
70. tgfb3 ENSDARG00000019367 2327 0.988 - 0.988 - - - - - - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
71. exoc1 ENSDARG00000043019 819 0.988 - 0.988 - - - - - - - exocyst complex component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1057]
72. tnfaip8l2b ENSDARG00000046148 1133 0.988 - 0.988 - - - - - - - tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
73. uck2a ENSDARG00000006074 1554 0.988 - 0.988 - - - - - - - uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
74. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.987 - 0.987 - - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
75. pon2 ENSDARG00000016856 1382 0.987 - 0.987 - - - - - - - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
76. ahr2 ENSDARG00000021833 762 0.987 - 0.987 - - - - - - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
77. eps15l1a ENSDARG00000042670 1565 0.987 - 0.987 - - - - - - - epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
78. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 0.987 - 0.987 - - - - - - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
79. acadvl ENSDARG00000016687 5329 0.987 - 0.987 - - - - - - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
80. si:dkey-22o12.7 si:dkey-22o12.7 1812 0.987 - 0.987 - - - - - - -
81. lemd3 ENSDARG00000015824 2868 0.987 - 0.987 - - - - - - - LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
82. atg16l1 ENSDARG00000099430 924 0.987 - 0.987 - - - - - - - ATG16 autophagy related 16-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-401]
83. gfer ENSDARG00000070061 1119 0.986 - 0.986 - - - - - - - growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-186]
84. arhgef1b ENSDARG00000055837 2330 0.986 - 0.986 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
85. aldh2.1 ENSDARG00000089924 2883 0.986 - 0.986 - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1262]
86. ptcd3 ENSDARG00000103856 2107 0.986 - 0.986 - - - - - - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
87. tiprl ENSDARG00000032353 1045 0.986 - 0.986 - - - - - - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
88. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 0.986 - 0.986 - - - - - - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
89. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 0.986 - 0.986 - - - - - - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
90. zgc:101569 ENSDARG00000038876 1525 0.986 - 0.986 - - - - - - - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
91. maea ENSDARG00000053691 1840 0.986 - 0.986 - - - - - - - macrophage erythroblast attacher [Source:ZFIN;Acc:ZDB-GENE-030131-294]
92. FP236813.1 FP236813.1 1842 0.986 - 0.986 - - - - - - -
93. LDLR LDLR 838 0.986 - 0.986 - - - - - - -
94. glsb ENSDARG00000040705 1439 0.985 - 0.985 - - - - - - - glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
95. cdc14b ENSDARG00000021483 4958 0.985 - 0.985 - - - - - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
96. ttc3 ENSDARG00000086075 2157 0.985 - 0.985 - - - - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
97. klf6a ENSDARG00000029072 3758 0.985 - 0.985 - - - - - - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
98. hoxc10a ENSDARG00000070348 2323 0.985 - 0.985 - - - - - - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
99. hccs hccs 1758 0.985 - 0.985 - - - - - - -
100. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 0.985 - 0.985 - - - - - - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]

There are 594 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA