Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hbp1

Gene Name Gene ID Reads Annotation
hbp1 ENSDARG00000028517 571 HMG-box transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-414]










Genes with expression patterns similar to hbp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hbp1 ENSDARG00000028517 571 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HMG-box transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-414]
2. eepd1 ENSDARG00000071116 176 1.632 - 0.903 - - - - 0.729 - - endonuclease/exonuclease/phosphatase family domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1831]
3. cx28.6 ENSDARG00000003925 146 1.62 - 0.848 - - - - 0.772 - - connexin 28.6 [Source:ZFIN;Acc:ZDB-GENE-040406-4]
4. gnptg ENSDARG00000038566 259 1.62 - - - - - - 0.869 - 0.751 N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
5. faxdc2 ENSDARG00000023820 260 1.592 - - - - - - 0.861 - 0.731 fatty acid hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2907]
6. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 1.582 0.826 - - - - - 0.756 - - ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
7. 5_8S_rRNA_2 5_8S_rRNA_2 424 1.566 - 0.711 - - - - 0.855 - -
8. ttc4 ENSDARG00000044405, ENSDARG00000117012 453 1.552 0.738 - - - - - 0.814 - - tetratricopeptide repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1021]
9. slc7a10a ENSDARG00000008100 178 1.545 - - - - - - 0.787 - 0.758 solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
10. nrg1 ENSDARG00000104314 1081 1.532 - - - - - - 0.815 0.717 - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
11. esyt3 ENSDARG00000006422 335 1.532 0.792 - - - - - - - 0.740 extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
12. retsat ENSDARG00000018600 832 1.524 - 0.771 - - - - 0.753 - - retinol saturase (all-trans-retinol 13,14-reductase) [Source:ZFIN;Acc:ZDB-GENE-050320-11]
13. BX927318.1 ENSDARG00000097713 199 1.519 - 0.783 - - - - 0.736 - -
14. stx11a ENSDARG00000044039 39 1.516 - - - - - - 0.814 - 0.702 syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
15. fut9 fut9 519 1.476 - 0.721 - - - - 0.755 - -
16. cat ENSDARG00000104702 1409 1.462 - 0.715 - - - - 0.747 - - catalase [Source:ZFIN;Acc:ZDB-GENE-000210-20]
17. tmem69 ENSDARG00000076017, ENSDARG00000110629 530 1.457 - 0.703 - - - 0.754 - - - transmembrane protein 69 [Source:ZFIN;Acc:ZDB-GENE-081022-98]
18. dhrs13a.3 ENSDARG00000041137 271 1.452 - 0.731 - - - - - 0.721 - dehydrogenase/reductase (SDR family) member 13a, duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-041114-134]
19. camkmt ENSDARG00000095224 1204 1.426 - - - - - - 0.722 - 0.704 calmodulin-lysine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-090313-49]
20. macrod1 ENSDARG00000029609 66 0.939 - - - - - - 0.939 - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
21. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 0.925 - - - 0.925 - - - - - inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
22. HSPA8 ENSDARG00000068992, ENSDARG00000114726 120 0.924 - - - 0.924 - - - - - heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
23. snoU2_19 snoU2_19 301 0.919 - - - 0.919 - - - - -
24. BX571811.1 ENSDARG00000105621 25 0.918 - - - - - - 0.918 - -
25. si:dkey-102g19.3 ENSDARG00000086337 26 0.918 - - - - - - 0.918 - - si:dkey-102g19.3 [Source:ZFIN;Acc:ZDB-GENE-091204-230]
26. C4H12orf45 C4H12orf45 483 0.915 - - - - - - 0.915 - -
27. si:ch211-110p13.9 ENSDARG00000093821 82 0.914 - - - - - - 0.914 - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
28. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 0.914 - - - - - - 0.914 - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
29. brip1 ENSDARG00000074410, ENSDARG00000113993 501 0.912 - - - - - - 0.912 - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
30. myo3a ENSDARG00000010186 117 0.91 - - - - - - 0.910 - - myosin IIIA [Source:ZFIN;Acc:ZDB-GENE-041026-4]
31. SPAG9 ENSDARG00000078142 629 0.909 - - - - - - 0.909 - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
32. ITPK1 ITPK1 78 0.908 - - - - - - 0.908 - -
33. agps ENSDARG00000042821 203 0.908 - - - - - - 0.908 - - alkylglycerone phosphate synthase [Source:ZFIN;Acc:ZDB-GENE-031118-14]
34. BX640398.1 ENSDARG00000097190 219 0.907 - 0.907 - - - - - - -
35. mtmr12 ENSDARG00000059817, ENSDARG00000116606 622 0.904 - - - 0.904 - - - - - myotubularin related protein 12 [Source:ZFIN;Acc:ZDB-GENE-050401-1]
36. adprh ENSDARG00000040712 298 0.903 - - - 0.903 - - - - - ADP-ribosylarginine hydrolase [Source:ZFIN;Acc:ZDB-GENE-040801-190]
37. CABZ01075125.1 ENSDARG00000102972 436 0.901 - - - 0.901 - - - - -
38. mtx3 ENSDARG00000090195 42 0.9 - - - - - - 0.900 - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
39. slc30a10 ENSDARG00000103983 46 0.897 - - - - - - 0.897 - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
40. ZNF337_4 ZNF337_4 409 0.896 - - - - - - 0.896 - -
41. si:dkey-75a21.2 ENSDARG00000093188 258 0.896 - - - - - - 0.896 - - si:dkey-75a21.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6823]
42. thtpa ENSDARG00000063049 286 0.896 - - - - - - 0.896 - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
43. utp15 ENSDARG00000002720 679 0.896 - - - - - - 0.896 - - utp15, U3 small nucleolar ribonucleoprotein, homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3831]
44. ENSDARG00000023499 ENSDARG00000023499 395 0.894 - - - - - - 0.894 - -
45. dip2c dip2c 248 0.893 - - - - - - 0.893 - -
46. acss1 ENSDARG00000044142, ENSDARG00000109700 516 0.893 - - - - - - 0.893 - - acyl-CoA synthetase short chain family member 1 [Source:ZFIN;Acc:ZDB-GENE-050320-139]
47. LIMA1 LIMA1 908 0.891 - - - 0.891 - - - - -
48. ASPH ENSDARG00000055945 214 0.889 - - - - - - 0.889 - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
49. phpt1 ENSDARG00000045567 211 0.889 - - - - - - 0.889 - - phosphohistidine phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-85]
50. rwdd2b ENSDARG00000055426 294 0.888 - - - - - - 0.888 - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
51. spg20b 224 0.888 - - - - - - 0.888 - - spastic paraplegia 20b (Troyer syndrome)
52. sfxn4 ENSDARG00000069832, ENSDARG00000115771 696 0.887 - - - 0.887 - - - - - sideroflexin 4 [Source:ZFIN;Acc:ZDB-GENE-050309-187]
53. si:ch73-191k20.4 37 0.887 - - - - - - 0.887 - - si:ch73-191k20.4, transcript variant X1
54. arhgap21b ENSDARG00000075673 948 0.887 - 0.887 - - - - - - - Rho GTPase activating protein 21b [Source:ZFIN;Acc:ZDB-GENE-030131-4944]
55. soat1 ENSDARG00000062297 71 0.885 - - - - - - 0.885 - - sterol O-acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-177]
56. CU984580.1 CU984580.1 141 0.885 - 0.885 - - - - - - -
57. rin1a ENSDARG00000079095 99 0.882 - - - - - - 0.882 - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
58. ECI2 ENSDARG00000102412 848 0.882 - 0.882 - - - - - - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
59. NEK3 ENSDARG00000058869 55 0.881 - 0.881 - - - - - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
60. PKN2 ENSDARG00000101293 358 0.88 - - - - - - 0.880 - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
61. SOWAHA SOWAHA 419 0.879 - 0.879 - - - - - - -
62. kdm2bb ENSDARG00000046010 747 0.878 - 0.878 - - - - - - - lysine (K)-specific demethylase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080225-13]
63. CR407594.2 CR407594.2 145 0.877 - - - - - - 0.877 - -
64. dhx34 ENSDARG00000061168 349 0.876 - - - - - - 0.876 - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
65. BX324198.2 BX324198.2 84 0.875 - - - - - - 0.875 - -
66. sox4b ENSDARG00000098834 1634 0.874 0.874 - - - - - - - - SRY (sex determining region Y)-box 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]
67. naglu ENSDARG00000030156 378 0.874 - - - - - - 0.874 - - N-acetylglucosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-100726-2]
68. knop1 ENSDARG00000077721 2198 0.874 - - - - - - 0.874 - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
69. LYAR ENSDARG00000098507 1506 0.873 - - - - - - 0.873 - - Ly1 antibody reactive homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1414]
70. irak4 ENSDARG00000100534 108 0.872 - - - - - - 0.872 - - interleukin-1 receptor-associated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-738]
71. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 0.871 - 0.871 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
72. FAM188B FAM188B 145 0.871 - - - - - - 0.871 - -
73. rtn4rl1a ENSDARG00000007856 242 0.871 - - - - - - 0.871 - - reticulon 4 receptor-like 1a [Source:ZFIN;Acc:ZDB-GENE-091118-38]
74. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.871 - - - - - - 0.871 - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
75. zdhhc14 ENSDARG00000037069 479 0.87 - 0.870 - - - - - - - zinc finger, DHHC-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-040724-21]
76. atxn1a ENSDARG00000061687, ENSDARG00000115198 367 0.87 - 0.870 - - - - - - - ataxin 1a [Source:ZFIN;Acc:ZDB-GENE-060503-759]
77. hivep3b ENSDARG00000037154 114 0.868 - - - - - - 0.868 - - human immunodeficiency virus type I enhancer binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-100922-42]
78. si:ch211-74m13.3 ENSDARG00000076144 55 0.868 - - - - - - 0.868 - - si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]
79. CABZ01073417.1 CABZ01073417.1 232 0.867 - - - - - - 0.867 - -
80. si:ch211-106g4.2 si:ch211-106g4.2 6 0.867 - - - - - - 0.867 - -
81. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 0.867 - - - - - - 0.867 - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
82. saga ENSDARG00000012610 63 0.867 - - - - - - 0.867 - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
83. mxtx1 ENSDARG00000069382 32 0.867 - - - - - - 0.867 - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
84. CABZ01058107.1 ENSDARG00000112826 8 0.867 - - - - - - 0.867 - - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
85. si:ch211-38m6.6 ENSDARG00000076959 12 0.867 - - - - - - 0.867 - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
86. KCNK7 ENSDARG00000057331 5 0.867 - - - - - - 0.867 - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
87. ftr56 ENSDARG00000030954 23 0.867 - - - - - - 0.867 - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
88. HIST2H4A HIST2H4A 33 0.867 - - - - - - 0.867 - -
89. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 0.866 - 0.866 - - - - - - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
90. si:ch211-229b6.1 ENSDARG00000093422 151 0.866 - - - - - - 0.866 - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
91. surf4l ENSDARG00000035131 3648 0.866 - - - - - - 0.866 - - surfeit gene 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-172]
92. mrps22 ENSDARG00000018073, ENSDARG00000115927 177 0.865 - - - - - - 0.865 - - mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]
93. BX465186.1 ENSDARG00000093047 28 0.865 - - - - - - 0.865 - -
94. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 0.864 - - - - - - 0.864 - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
95. si:dkey-182i3.9 ENSDARG00000096575 56 0.863 - - - - - - 0.863 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
96. eltd1 eltd1 295 0.863 - - - - - - 0.863 - -
97. fam46a fam46a 92 0.863 - - - - - - 0.863 - -
98. slc5a2 ENSDARG00000100919 47 0.863 - 0.863 - - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
99. EDEM3 ENSDARG00000074129 805 0.862 - - - 0.862 - - - - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
100. vps11 ENSDARG00000036338 421 0.861 - 0.861 - - - - - - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]

There are 674 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA