Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for h1fx

Gene Name Gene ID Reads Annotation
h1fx ENSDARG00000054058 4075 H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]










Genes with expression patterns similar to h1fx

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. h1fx ENSDARG00000054058 4075 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
2. zranb2 ENSDARG00000044332 6723 2.541 - - - - - 0.815 0.998 - 0.728 zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
3. brd1b ENSDARG00000051798 1712 2.493 - 0.836 - - - 0.735 - 0.922 - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
4. TAF15 ENSDARG00000070019 5102 2.43 0.773 0.847 - - - - - - 0.810 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
5. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 2.412 - 0.744 - - 0.955 - - - 0.713 GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
6. uba1 ENSDARG00000037559 11579 2.349 0.773 0.827 - - - - - 0.749 - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
7. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 2.312 - 0.740 - - 0.834 0.738 - - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
8. snrpd3l ENSDARG00000076283 7655 2.247 - - - - 0.729 0.753 - - 0.765 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
9. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.189 - 0.707 - - 0.776 - - - 0.706 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
10. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 1.911 - - - - 0.958 - - 0.953 - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
11. atl3 ENSDARG00000004270 2806 1.858 - - - - 0.953 - - 0.905 - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
12. si:ch73-110p20.1 5932 1.84 - - - - - - 0.996 0.844 - si:ch73-110p20.1
13. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.839 - - - - 0.912 - - 0.927 - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
14. mcts1 ENSDARG00000025972 4662 1.827 - - - - 0.930 - - 0.897 - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
15. rab32a ENSDARG00000029036 2157 1.82 - - - - 0.958 0.862 - - - RAB32a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031006-10]
16. shmt1 ENSDARG00000052816 5463 1.808 - - - - 0.828 - 0.980 - - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
17. lsm14ab ENSDARG00000100553 3837 1.798 - 0.861 - - 0.937 - - - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
18. lsm12b ENSDARG00000109510 14459 1.764 - - - - - - 0.983 0.781 - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
19. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 1.756 - - - - 0.875 - - 0.881 - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
20. mapre1b ENSDARG00000002659 9119 1.75 - - - - - - 0.998 - 0.752 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
21. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 1.75 - - - - - 0.753 0.997 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
22. psmc5 ENSDARG00000015315 8458 1.731 - 0.790 - - 0.941 - - - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
23. tmem50a ENSDARG00000015757 3244 1.729 - - - - 0.959 0.770 - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
24. ndufb8 ENSDARG00000010113 11385 1.729 - - - - - 0.741 0.988 - - NADH:ubiquinone oxidoreductase subunit B8 [Source:ZFIN;Acc:ZDB-GENE-040426-1858]
25. eif3s6ip ENSDARG00000101082 18515 1.728 0.741 - - - - - 0.987 - - eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
26. cct5 ENSDARG00000045399 11572 1.728 0.737 - - - - - 0.991 - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
27. sin3b ENSDARG00000062472 2025 1.727 - - - - 0.962 - - - 0.765 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
28. zbtb18 ENSDARG00000028228 3653 1.72 - - - - - - 0.999 - 0.721 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
29. txlna ENSDARG00000077037 2614 1.718 - 0.764 - - 0.954 - - - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
30. fermt1 ENSDARG00000052652 2394 1.714 - 0.810 - - - - - 0.904 - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
31. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 1.704 - - - - - 0.705 0.999 - - secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
32. FBXO33 ENSDARG00000075400 1164 1.703 - 0.749 - - 0.954 - - - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
33. med6 ENSDARG00000034734 2711 1.7 - - - - - - 0.999 - 0.701 mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
34. smn1 ENSDARG00000018494 1024 1.691 - 0.737 - - 0.954 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
35. ing5b ENSDARG00000068175 2502 1.69 0.764 - - - 0.926 - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
36. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.69 0.785 - - - 0.905 - - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
37. pvrl1b 1645 1.688 - 0.771 - - - - - 0.917 - poliovirus receptor-related 1b
38. ylpm1 ENSDARG00000043680 7676 1.684 - 0.777 - - - - - 0.907 - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
39. piezo1 ENSDARG00000076870 4704 1.684 - 0.879 - - - - - 0.805 - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
40. csnk1g2a ENSDARG00000005458 2917 1.684 - - - - 0.949 0.735 - - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
41. mfsd8 ENSDARG00000103235, ENSDARG00000115968 2067 1.677 - 0.733 - - 0.944 - - - - major facilitator superfamily domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060818-29]
42. ndrg3a ENSDARG00000013087 5581 1.672 0.766 - - - - - - 0.906 - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
43. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.67 - 0.751 - - - - - 0.919 - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
44. ddi2 ENSDARG00000006477 4190 1.666 - 0.745 - - 0.921 - - - - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
45. atp6v0cb ENSDARG00000036577 3472 1.665 - - - - 0.933 - - - 0.732 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
46. nol9 ENSDARG00000077751 2471 1.664 - 0.717 - - 0.947 - - - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
47. rbm4.2 ENSDARG00000055080 5241 1.663 - 0.777 - - 0.886 - - - - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
48. zgc:113442 ENSDARG00000101906 3092 1.66 - 0.731 - - 0.929 - - - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
49. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.66 - - - - - 0.727 - 0.933 - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
50. nuf2 ENSDARG00000034624 2252 1.655 - 0.711 - - 0.944 - - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
51. C1H7orf55 C1H7orf55 2552 1.651 0.717 - - - 0.934 - - - -
52. CEP350 ENSDARG00000058000 2887 1.649 - 0.755 - - - - - 0.894 - centrosomal protein 350 [Source:ZFIN;Acc:ZDB-GENE-030131-6975]
53. atp5h 18018 1.645 0.766 - - - - - - 0.879 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
54. cbfa2t2 ENSDARG00000074337 4323 1.645 - - - - 0.892 0.753 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
55. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.643 - - - - 0.876 - - - 0.767 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
56. kera ENSDARG00000056938 2434 1.64 - - 0.705 - 0.935 - - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
57. rab5c ENSDARG00000026712 4733 1.637 - - - - 0.920 0.717 - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
58. ezrb ENSDARG00000025091 2861 1.634 - - - - - 0.740 - 0.894 - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
59. frmd6 ENSDARG00000002332 2698 1.629 - - - - - 0.711 - 0.918 - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
60. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 1.626 - 0.779 - - 0.847 - - - - survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
61. marcksa ENSDARG00000004049 2518 1.618 - - - - 0.915 - - - 0.703 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
62. ddost ENSDARG00000037318 10904 1.614 - - - - - 0.776 - 0.838 - dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
63. tns1 tns1 5891 1.613 - - - - 0.866 0.747 - - -
64. plxnb2a ENSDARG00000003811, ENSDARG00000094799 1662 1.609 - 0.702 - - - - - 0.907 - plexin b2a [Source:ZFIN;Acc:ZDB-GENE-030131-8917]
65. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 1.607 0.702 - - - - - - 0.905 - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
66. spcs1 ENSDARG00000059298 5327 1.604 - 0.810 - - - 0.794 - - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
67. SNRPG ENSDARG00000099667 18697 1.591 - - - - - - - 0.823 0.768 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
68. sra1 ENSDARG00000053619 2799 1.588 - - - - - 0.705 - 0.883 - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
69. myeov2 3351 1.581 - 0.838 - - - 0.743 - - - myeloma overexpressed 2
70. meis2b ENSDARG00000077840 5166 1.58 - - - - 0.823 0.757 - - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
71. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.559 - - - - - 0.745 0.814 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
72. myl9b ENSDARG00000008030 7830 1.556 - - - - 0.742 - - 0.814 - myosin, light chain 9b, regulatory [Source:ZFIN;Acc:ZDB-GENE-040426-2296]
73. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.554 - - - - 0.841 - - - 0.713 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
74. srsf3b ENSDARG00000059360 14888 1.548 - - - - 0.802 0.746 - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
75. cdk2ap2 ENSDARG00000103145 8024 1.545 - - - - 0.808 - - - 0.737 cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
76. pop5 ENSDARG00000053452 1347 1.54 - 0.796 - - - 0.744 - - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
77. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.536 - - - - - 0.701 - 0.835 - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
78. gpx7 ENSDARG00000091511 3045 1.531 - - - - - 0.712 - 0.819 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
79. psmb7 ENSDARG00000037962 11542 1.529 - 0.795 - - - - - - 0.734 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
80. gnb2l1 61553 1.523 - - - - 0.739 - 0.784 - - guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
81. eif4h ENSDARG00000042252 6742 1.521 0.733 - - - - - - - 0.788 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
82. psmd7 ENSDARG00000102417 4732 1.521 - - - - - 0.798 - - 0.723 proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
83. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.519 - - - - - 0.701 - 0.818 - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
84. HIST1H4J_1 HIST1H4J_1 4066 1.512 - 0.730 - - 0.782 - - - -
85. RSL1D1 ENSDARG00000055868, ENSDARG00000115696 3825 1.509 0.720 0.789 - - - - - - - ribosomal L1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130603-67]
86. safb ENSDARG00000020467 5608 1.505 - - - - - 0.778 - - 0.727 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
87. EEF1E1 ENSDARG00000071774 3806 1.504 0.757 - - - - 0.747 - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
88. smc1al ENSDARG00000058203 8838 1.502 0.745 0.757 - - - - - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
89. wu:fk48d07 wu:fk48d07 13245 1.493 0.715 - - - - - - - 0.778
90. kmt2cb ENSDARG00000075560 4816 1.49 - - - - 0.709 0.781 - - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
91. ywhae2 ENSDARG00000017014 5105 1.489 - 0.734 - - - 0.755 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
92. magt1 ENSDARG00000058062 3903 1.486 - 0.777 - - - 0.709 - - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
93. gtpbp4 ENSDARG00000018961 5323 1.486 - - - - - 0.745 - - 0.741 GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
94. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.483 - 0.733 - - - 0.750 - - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
95. prkg1a ENSDARG00000020656 918 1.478 0.708 0.770 - - - - - - - protein kinase cGMP-dependent 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1308]
96. znf346 ENSDARG00000060695 3942 1.478 0.755 - - - - - - - 0.723 zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
97. rac2 ENSDARG00000038010 5837 1.473 - 0.738 - - - - - 0.735 - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
98. si:ch211-198b3.1 si:ch211-198b3.1 765 1.468 - 0.729 - - - 0.739 - - -
99. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.463 - 0.716 - - - - - 0.747 - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
100. hadhb ENSDARG00000102055 9700 1.462 0.734 0.728 - - - - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]

There are 1127 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA