Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gtf2ird1

Gene Name Gene ID Reads Annotation
gtf2ird1 ENSDARG00000022203, ENSDARG00000112976 294 GTF2I repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-010328-18]










Genes with expression patterns similar to gtf2ird1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gtf2ird1 ENSDARG00000022203, ENSDARG00000112976 294 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GTF2I repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-010328-18]
2. si:dkey-50i6.5 ENSDARG00000101320 95 1.687 - 0.816 - - - 0.871 - - - si:dkey-50i6.5 [Source:ZFIN;Acc:ZDB-GENE-081031-53]
3. znf668 ENSDARG00000025226, ENSDARG00000112533 177 1.68 - 0.794 - - - 0.886 - - - zinc finger protein 668 [Source:ZFIN;Acc:ZDB-GENE-041001-46]
4. tnfsf10l4 ENSDARG00000058068, ENSDARG00000111545 136 1.657 - 0.797 - - - 0.860 - - - tumor necrosis factor (ligand) superfamily, member 10 like 4 [Source:ZFIN;Acc:ZDB-GENE-050227-6]
5. usp20 ENSDARG00000027501, ENSDARG00000116822 211 1.645 0.778 - - - - 0.867 - - - ubiquitin specific peptidase 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1219]
6. dph7 ENSDARG00000062083 248 1.612 0.733 - - - - 0.879 - - - diphthamide biosynthesis 7 [Source:ZFIN;Acc:ZDB-GENE-070410-57]
7. ddx31 ENSDARG00000035507 167 1.609 - 0.713 - - - 0.896 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
8. sfi1 ENSDARG00000053992 1075 1.607 - 0.752 - - - 0.855 - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
9. fam86a fam86a 174 1.603 - 0.780 - - - 0.823 - - -
10. cap1 ENSDARG00000016350 891 1.586 - 0.774 - - - 0.812 - - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
11. ZDHHC5 ZDHHC5 836 1.577 - - - - - 0.872 0.705 - -
12. rnf114 ENSDARG00000009886 725 1.575 - - - - - 0.817 0.758 - - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
13. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.558 - 0.793 - - - 0.765 - - - phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
14. tle2c ENSDARG00000067832 367 1.543 - 0.782 - - - - 0.761 - - transducin like enhancer of split 2c [Source:ZFIN;Acc:ZDB-GENE-060512-84]
15. dhx57 ENSDARG00000057660 390 1.537 - - - - - 0.828 0.709 - - DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Source:ZFIN;Acc:ZDB-GENE-030131-4078]
16. si:dkey-18j14.4 si:dkey-18j14.4 60 1.521 - 0.700 - - - 0.821 - - -
17. TRIM65 ENSDARG00000077098 991 1.485 - 0.771 - - - - 0.714 - - tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
18. tctn1 ENSDARG00000078447 330 1.474 - 0.714 - - - 0.760 - - - tectonic family member 1 [Source:ZFIN;Acc:ZDB-GENE-081104-157]
19. her8.2 ENSDARG00000069675 315 1.443 0.704 0.739 - - - - - - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
20. MYO5A MYO5A 595 1.429 - - - - 0.710 0.719 - - -
21. KCNK3 KCNK3 115 0.954 - 0.954 - - - - - - -
22. stx3a ENSDARG00000001880 69 0.949 - 0.949 - - - - - - - syntaxin 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1489]
23. CR626907.1 ENSDARG00000077872 247 0.927 - - - - - 0.927 - - - alpha-2-macroglobulin-like [Source:NCBI gene;Acc:100006895]
24. si:dkey-30j22.1 ENSDARG00000042829 25 0.92 - - - - - 0.920 - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]
25. znf622 ENSDARG00000014692 921 0.919 - - - - - 0.919 - - - zinc finger protein 622 [Source:ZFIN;Acc:ZDB-GENE-050927-1]
26. gbp1 ENSDARG00000038668 520 0.918 - - - - - 0.918 - - - guanylate binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-32]
27. tspan13a ENSDARG00000068883 678 0.918 - - - - - 0.918 - - - tetraspanin 13a [Source:ZFIN;Acc:ZDB-GENE-040718-19]
28. syt1a ENSDARG00000030614 542 0.918 - 0.918 - - - - - - - synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
29. slc50a1 ENSDARG00000015158 329 0.917 - - - - - 0.917 - - - solute carrier family 50 (sugar efflux transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-050220-11]
30. inpp5e ENSDARG00000103926 567 0.917 - 0.917 - - - - - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
31. dcp2_1 ENSDARG00000104242 74 0.915 - 0.915 - - - - - - - decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
32. mfsd12a ENSDARG00000061908 68 0.915 - - - - - 0.915 - - - major facilitator superfamily domain containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-4642]
33. grnb ENSDARG00000025081 716 0.915 - - - - - 0.915 - - - granulin b [Source:ZFIN;Acc:ZDB-GENE-030131-7393]
34. si:dkey-242h9.3 ENSDARG00000069189 83 0.914 - - - - - 0.914 - - - si:dkey-242h9.3 [Source:ZFIN;Acc:ZDB-GENE-060503-347]
35. map4k3a ENSDARG00000087742 771 0.912 - - - - - 0.912 - - - mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
36. irg1l ENSDARG00000062788 503 0.912 - - - - - 0.912 - - - immunoresponsive gene 1, like [Source:ZFIN;Acc:ZDB-GENE-061103-301]
37. ube2w ENSDARG00000044923 438 0.911 - - - - - 0.911 - - - ubiquitin-conjugating enzyme E2W (putative) [Source:ZFIN;Acc:ZDB-GENE-050506-94]
38. supt4h1 ENSDARG00000113969 1024 0.91 - - - - - 0.910 - - - SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
39. taf12 ENSDARG00000104030, ENSDARG00000115004 163 0.91 - 0.910 - - - - - - - TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-031030-5]
40. prdm14 ENSDARG00000045371 106 0.909 0.909 - - - - - - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
41. CABZ01066502.1 CABZ01066502.1 783 0.907 - - - - - 0.907 - - -
42. DLEU7 DLEU7 91 0.907 - - - - - 0.907 - - -
43. si:dkey-178o8.2 si:dkey-178o8.2 15 0.906 - - - - - 0.906 - - -
44. PRR5 PRR5 630 0.906 - - - - - 0.906 - - -
45. si:ch211-215d8.2 ENSDARG00000093233 784 0.906 - - - - - 0.906 - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
46. TSG101 TSG101 1686 0.906 - - - - - 0.906 - - -
47. C3_1 C3_1 637 0.905 - - - - - 0.905 - - -
48. tradd ENSDARG00000036057, ENSDARG00000117083 1583 0.905 - - - - - 0.905 - - - tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
49. gas2l3 ENSDARG00000045880 614 0.904 0.904 - - - - - - - - growth arrest-specific 2 like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2560]
50. hbl4 ENSDARG00000054202, ENSDARG00000109644 248 0.904 - - - - - 0.904 - - - hexose-binding lectin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-287]
51. rgra ENSDARG00000054890 848 0.903 - - - - - 0.903 - - - retinal G protein coupled receptor a [Source:ZFIN;Acc:ZDB-GENE-040924-6]
52. CABZ01039235.1 CABZ01039235.1 207 0.903 - 0.903 - - - - - - -
53. ftr24 ENSDARG00000008396, ENSDARG00000112253 1652 0.902 - - - - - 0.902 - - - finTRIM family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050731-2]
54. wdr41 ENSDARG00000009851 420 0.902 - - - - - 0.902 - - - WD repeat domain 41 [Source:ZFIN;Acc:ZDB-GENE-050706-152]
55. stub1 ENSDARG00000045228 105 0.901 - - - - - 0.901 - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
56. haus1 ENSDARG00000058968 1336 0.901 - - - - - 0.901 - - - HAUS augmin-like complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-091204-387]
57. stxbp5b ENSDARG00000029234 760 0.901 - - - - - 0.901 - - - syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
58. ENSDARG00000086641 ENSDARG00000086641 1819 0.9 - - - - - 0.900 - - -
59. vps8 ENSDARG00000060477, ENSDARG00000113757 271 0.9 - - - - - 0.900 - - - vacuolar protein sorting 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-348]
60. zgc:136791 97 0.9 - - - - - 0.900 - - - zgc:136791, transcript variant X3
61. ttc7a ENSDARG00000074760 39 0.899 - - - - - 0.899 - - - tetratricopeptide repeat domain 7A [Source:ZFIN;Acc:ZDB-GENE-010319-27]
62. si:dkey-162h11.2 si:dkey-162h11.2 257 0.899 - - - - - 0.899 - - -
63. wdfy2 ENSDARG00000040453 406 0.898 - - - - - 0.898 - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
64. lgals9l1 ENSDARG00000025903 58 0.898 - - - - - 0.898 - - - lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9543]
65. ralgps1 ENSDARG00000068370 39 0.898 - - - - - 0.898 - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
66. mybl1 ENSDARG00000030999 158 0.897 - - - - - 0.897 - - - v-myb avian myeloblastosis viral oncogene homolog-like 1 [Source:ZFIN;Acc:ZDB-GENE-041111-281]
67. st6galnac1.1 ENSDARG00000043814 95 0.897 - - - - - 0.897 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
68. nhej1 ENSDARG00000058893 172 0.897 - - - - - 0.897 - - - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
69. neu1 ENSDARG00000008832 2848 0.896 - - - - - 0.896 - - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]
70. dmc1 ENSDARG00000055883, ENSDARG00000110457 5 0.896 - - - - - 0.896 - - - DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GENE-060331-93]
71. cry2b cry2b 517 0.895 - - - - - 0.895 - - -
72. cyp19a1b ENSDARG00000098360 8 0.895 - - - - - 0.895 - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
73. zgc:154040 16 0.895 - - - - - 0.895 - - - zgc:154040
74. chia.3 ENSDARG00000009612 14 0.895 - - - - - 0.895 - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
75. hnf1a ENSDARG00000009470 60 0.895 - - - - - 0.895 - - - HNF1 homeobox a [Source:ZFIN;Acc:ZDB-GENE-021206-12]
76. syt14b ENSDARG00000001891 85 0.895 - - - - - 0.895 - - - synaptotagmin XIVb [Source:ZFIN;Acc:ZDB-GENE-041014-36]
77. si:dkey-30j10.5 ENSDARG00000093186 13 0.895 - - - - - 0.895 - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
78. dennd2db ENSDARG00000030250 24 0.895 - - - - - 0.895 - - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
79. pnocb ENSDARG00000024189 18 0.895 - - - - - 0.895 - - - prepronociceptin b [Source:ZFIN;Acc:ZDB-GENE-040114-1]
80. btr02 ENSDARG00000052215 401 0.895 - - - - - 0.895 - - - bloodthirsty-related gene family, member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-228]
81. CABZ01072607.1 ENSDARG00000113761 784 0.895 - - - - - 0.895 - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
82. SIGLEC15 SIGLEC15 10 0.895 - - - - - 0.895 - - -
83. RBBP6_2 RBBP6_2 23 0.895 - - - - - 0.895 - - -
84. si:dkeyp-46h3.2 ENSDARG00000092498 23 0.895 - - - - - 0.895 - - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
85. b3gntl1 ENSDARG00000043431 50 0.895 - - - - - 0.895 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
86. ARHGEF38 ENSDARG00000079377 9 0.895 - - - - - 0.895 - - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
87. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 0.895 - - - - - 0.895 - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
88. lyrm5b ENSDARG00000045827 91 0.895 - - - - - 0.895 - - - LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]
89. si:dkey-216e24.4 si:dkey-216e24.4 14 0.895 - - - - - 0.895 - - -
90. wnt10a ENSDARG00000017155 491 0.894 - - - - - 0.894 - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
91. WIPI1 ENSDARG00000040657 138 0.894 - - - - - 0.894 - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
92. 5S_rRNA_2 5S_rRNA_2 89 0.893 - 0.893 - - - - - - -
93. fmnl2a ENSDARG00000012586 136 0.893 - 0.893 - - - - - - - formin-like 2a [Source:ZFIN;Acc:ZDB-GENE-081105-70]
94. ZBTB39 ENSDARG00000019265 687 0.893 0.893 - - - - - - - - zinc finger and BTB domain containing 39 [Source:ZFIN;Acc:ZDB-GENE-130822-1]
95. prkrirb 330 0.893 - - - - - 0.893 - - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) b
96. MPZL2 MPZL2 31 0.892 - - - - - 0.892 - - -
97. stk25a ENSDARG00000002210 372 0.892 - - - - - 0.892 - - - serine/threonine kinase 25a [Source:ZFIN;Acc:ZDB-GENE-041010-92]
98. C12H10orf2 C12H10orf2 245 0.892 - - - - - 0.892 - - -
99. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.892 - - - - - 0.892 - - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
100. slc48a1b ENSDARG00000026109 1427 0.892 - - - - - 0.892 - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]

There are 1037 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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