Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gsk3b

Gene Name Gene ID Reads Annotation
gsk3b ENSDARG00000017803 3438 glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]










Genes with expression patterns similar to gsk3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gsk3b ENSDARG00000017803 3438 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
2. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 2.457 - 0.979 - - 0.772 0.706 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
3. smarce1 ENSDARG00000016871 9628 2.414 - 0.979 - - - 0.726 0.709 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
4. tmpoa ENSDARG00000007315 3638 2.394 - 0.991 - - - 0.702 0.701 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
5. zswim5 ENSDARG00000055900 4243 2.286 - - - - 0.719 0.758 0.809 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
6. znf865 ENSDARG00000036698 15532 2.263 - - - - - 0.741 0.795 - 0.727 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
7. wu:fb54a03 wu:fb54a03 1722 1.764 - 0.986 - - 0.778 - - - -
8. ddx42 ENSDARG00000037928 1659 1.761 - 0.984 - - 0.777 - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
9. acap3a ENSDARG00000075990 9652 1.753 - 0.986 - - - - 0.767 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
10. whsc1l1 8544 1.751 - 0.971 - - - - 0.780 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
11. mdm2 ENSDARG00000033443, ENSDARG00000115677 2480 1.747 - 0.954 - - 0.793 - - - - MDM2 oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-990415-153]
12. acin1a ENSDARG00000054290 14023 1.745 - 0.946 - - - - 0.799 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
13. ube2f ENSDARG00000025754 1946 1.743 - 0.983 - - 0.760 - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
14. fhdc1 ENSDARG00000074812 934 1.737 - 0.972 - - 0.765 - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
15. CPEB4 CPEB4 3249 1.726 - 0.971 - - - - 0.755 - -
16. mid1ip1l ENSDARG00000018145 2789 1.722 - 0.977 - - 0.745 - - - - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
17. max ENSDARG00000024844 6035 1.715 - 0.963 - - 0.752 - - - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
18. setbp1 ENSDARG00000093799 4499 1.714 - 0.986 - - - 0.728 - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
19. top2a ENSDARG00000024488 4273 1.714 - 0.970 - - - - 0.744 - - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
20. asna1 ENSDARG00000018190 5253 1.703 - 0.967 - - - 0.736 - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
21. rsu1 ENSDARG00000102885 3604 1.7 - 0.983 - - - - 0.717 - - Ras suppressor protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-518]
22. pim1 ENSDARG00000100020 7035 1.7 - 0.977 - - - 0.723 - - - Pim-1 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-061013-139]
23. tspan9b ENSDARG00000045706, ENSDARG00000110620, ENSDARG00000111048 2161 1.697 0.913 - - - 0.784 - - - - tetraspanin 9b [Source:ZFIN;Acc:ZDB-GENE-040704-25]
24. smox ENSDARG00000036967 3816 1.696 - 0.982 - - - - - - 0.714 spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
25. rbm14b ENSDARG00000103834 1597 1.694 - 0.984 - - - - - 0.710 - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
26. HNRNPA2B1 HNRNPA2B1 14997 1.694 - 0.967 - - - - 0.727 - -
27. tes ENSDARG00000051857 2020 1.688 - 0.981 - - - 0.707 - - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
28. srsf6b ENSDARG00000016783 9926 1.687 - 0.981 - - - - 0.706 - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
29. snx27b ENSDARG00000016977 2768 1.686 - 0.986 - - - - 0.700 - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
30. atp2b4 5891 1.665 - 0.914 - - - 0.751 - - - ATPase, Ca++ transporting, plasma membrane 4
31. tufm ENSDARG00000104173 9292 1.652 - 0.939 - - - - 0.713 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
32. atp6v1c1a ENSDARG00000023967 4611 1.621 - - - - - 0.873 - - 0.748 ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
33. boc ENSDARG00000074335 4832 1.619 - 0.820 - - - - 0.799 - - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
34. st13 ENSDARG00000021973 7787 1.608 - 0.811 - - - 0.797 - - - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
35. rerea ENSDARG00000077353 4162 1.592 - - - - - 0.788 0.804 - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
36. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.586 - - - - - 0.792 0.794 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
37. blcap ENSDARG00000052073 8646 1.586 - - - - - 0.776 0.810 - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
38. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.584 0.783 - - - 0.801 - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
39. psma4 ENSDARG00000045928 5112 1.583 - - - - 0.837 0.746 - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
40. setb ENSDARG00000003920 21788 1.582 - 0.794 - - - 0.788 - - - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
41. kdm5c ENSDARG00000006124 4389 1.579 - - - - 0.786 0.793 - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
42. cul4b ENSDARG00000060510 6053 1.577 - - - - 0.755 0.822 - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
43. PPP1R8 PPP1R8 1897 1.575 - - - - 0.795 0.780 - - -
44. prkacaa ENSDARG00000100349 2711 1.565 - - - - 0.827 - 0.738 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
45. uba1 ENSDARG00000037559 11579 1.562 - - - - - 0.815 0.747 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
46. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.56 - - - - - 0.825 0.735 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
47. ect2 ENSDARG00000007278 1193 1.555 - - - - 0.788 - 0.767 - - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
48. akirin2 ENSDARG00000058729 13245 1.552 - - - - - 0.735 0.817 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
49. pum1 ENSDARG00000099256 5017 1.551 - - - - - 0.779 0.772 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
50. si:ch211-288g17.3 ENSDARG00000070959 2425 1.55 - - - - 0.833 - 0.717 - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
51. ZNF618 ENSDARG00000071469 2347 1.549 - - - - - - 0.717 - 0.832 zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
52. GATAD2B ENSDARG00000005834 3855 1.538 - - - - - 0.730 0.808 - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
53. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.536 - - - - - 0.791 0.745 - - VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
54. rtf1 ENSDARG00000008947 6596 1.534 - - - - 0.827 0.707 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
55. prkcsh ENSDARG00000004470 1424 1.533 - - - - - - 0.804 - 0.729 protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
56. dchs1b ENSDARG00000079850 831 1.532 - - - - 0.792 - 0.740 - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
57. polr3e ENSDARG00000037358 1864 1.526 - - - - 0.817 - 0.709 - - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
58. smad3a ENSDARG00000036096, ENSDARG00000117146 2668 1.525 - - - - - - 0.737 - 0.788 SMAD family member 3a [Source:ZFIN;Acc:ZDB-GENE-000509-3]
59. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.525 - - - - 0.785 - 0.740 - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
60. scaf4a ENSDARG00000077093 2408 1.523 - - - - 0.785 - - - 0.738 SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
61. get4 ENSDARG00000024398 1818 1.522 - - - - 0.814 - 0.708 - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
62. ddx39ab ENSDARG00000015111 11619 1.514 - - - - - 0.769 0.745 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
63. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.514 - - - - 0.759 - 0.755 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
64. cltcb ENSDARG00000090716 5544 1.513 - - - - - 0.731 0.782 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
65. TNRC6A ENSDARG00000079688 14433 1.513 - - - - - 0.754 0.759 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
66. snx1a ENSDARG00000071031 3975 1.512 - - - - - - 0.782 - 0.730 sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
67. strada ENSDARG00000037929 1614 1.511 - - - - 0.739 - 0.772 - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
68. proza ENSDARG00000037783, ENSDARG00000116864 500 1.509 0.798 - - - - - 0.711 - - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
69. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.506 - - - - - 0.745 0.761 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
70. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 1.506 - - - - - 0.705 0.801 - - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
71. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.506 - - - - - 0.794 0.712 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
72. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.504 - - - - - 0.771 0.733 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
73. ammecr1 ENSDARG00000012892 14475 1.504 - - - - - 0.803 0.701 - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
74. MRPL2 ENSDARG00000062568 407 1.502 0.769 - - - - - 0.733 - - mitochondrial ribosomal protein L2 [Source:ZFIN;Acc:ZDB-GENE-050809-12]
75. ube2nb ENSDARG00000045877 4583 1.498 - - - - 0.743 0.755 - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
76. isoc2 ENSDARG00000013371 1378 1.497 - - - - - - 0.778 - 0.719 isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
77. aurkb ENSDARG00000037640 4874 1.496 - - - - - - 0.777 - 0.719 aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
78. caprin1b ENSDARG00000054272 7033 1.493 - - - - - 0.712 0.781 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
79. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.491 - - - - 0.784 - - - 0.707 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
80. srrm1 ENSDARG00000001244 4972 1.489 - - - - - - 0.767 - 0.722 serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
81. RNF38 ENSDARG00000062055 3901 1.488 - - - - - 0.751 0.737 - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
82. MKI67 ENSDARG00000091150 11038 1.488 - - - - - 0.749 0.739 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
83. neo1 neo1 4056 1.483 - - - - - 0.716 0.767 - -
84. CABZ01080568.2 CABZ01080568.2 2137 1.481 - - - - 0.768 - 0.713 - -
85. Sep-02 Sep-02 10074 1.481 - - - - - 0.754 0.727 - -
86. rnf2 ENSDARG00000010381 3427 1.48 - - - - - 0.773 0.707 - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
87. FOXK2 ENSDARG00000030583 5500 1.479 - - - - - 0.716 - - 0.763 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
88. srsf6a ENSDARG00000013729 8576 1.478 - - - - - 0.726 0.752 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
89. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.477 - - - - - 0.725 0.752 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
90. smc1al ENSDARG00000058203 8838 1.476 - - - - - 0.761 0.715 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
91. ap2s1 ENSDARG00000026967 18613 1.474 - - - - 0.723 0.751 - - - adaptor related protein complex 2 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2174]
92. hoxd10a ENSDARG00000057859 1498 1.472 - - - - 0.746 - 0.726 - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
93. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.47 - - - - - - 0.734 - 0.736 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
94. hsp90aa1.2 ENSDARG00000024746 5210 1.47 - - - - 0.741 - 0.729 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-031001-3]
95. rasa3 ENSDARG00000063371 227 1.469 0.720 - - - - - 0.749 - - RAS p21 protein activator 3 [Source:ZFIN;Acc:ZDB-GENE-090313-21]
96. pak2b ENSDARG00000018476 4331 1.468 - - - - 0.761 0.707 - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
97. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.467 - - - - - 0.709 0.758 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
98. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.467 0.737 - - - - - 0.730 - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
99. crebbpa ENSDARG00000104609 1739 1.467 - - - - - 0.753 - - 0.714 CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
100. znf346 ENSDARG00000060695 3942 1.463 0.709 - - - - - 0.754 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]

There are 1173 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA