Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gpn3

Gene Name Gene ID Reads Annotation
gpn3 ENSDARG00000069525 499 GPN-loop GTPase 3 [Source:ZFIN;Acc:ZDB-GENE-040724-141]










Genes with expression patterns similar to gpn3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gpn3 ENSDARG00000069525 499 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GPN-loop GTPase 3 [Source:ZFIN;Acc:ZDB-GENE-040724-141]
2. thnsl2 ENSDARG00000032584 59 1.603 0.730 0.873 - - - - - - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
3. ednrb1a ednrb1a 1255 1.58 - 0.871 - - - - 0.709 - -
4. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.575 0.748 0.827 - - - - - - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
5. phf23b ENSDARG00000036305 1073 1.572 0.767 0.805 - - - - - - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
6. mitfa ENSDARG00000003732 1288 1.549 - 0.848 - - - - 0.701 - - microphthalmia-associated transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]
7. ptprb ENSDARG00000076624 323 1.529 0.775 - - - - - 0.754 - - protein tyrosine phosphatase, receptor type, b [Source:ZFIN;Acc:ZDB-GENE-101108-3]
8. pknox2 ENSDARG00000055349 784 1.509 0.729 0.780 - - - - - - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
9. wu:fb17g07 wu:fb17g07 10567 1.501 0.746 0.755 - - - - - - -
10. cap2 ENSDARG00000104478 3266 1.498 0.771 - - - - - 0.727 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
11. ppp1r14c ENSDARG00000077341 1587 1.484 0.709 - - - - - 0.775 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
12. rp42-pen rp42-pen 3395 1.481 - 0.724 - - - - 0.757 - -
13. si:dkey-88p24.9 si:dkey-88p24.9 1197 1.442 - - - - - 0.720 0.722 - -
14. uckl1b ENSDARG00000078973 2237 1.437 0.709 - - - - - 0.728 - - uridine-cytidine kinase 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-090311-45]
15. slc1a3a ENSDARG00000104431 9888 1.435 0.700 0.735 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
16. stmn2b ENSDARG00000070537 1586 1.435 0.703 0.732 - - - - - - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
17. nrn1a ENSDARG00000071860 1311 1.406 0.705 0.701 - - - - - - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
18. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 0.967 - 0.967 - - - - - - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
19. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 0.967 - 0.967 - - - - - - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
20. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 0.964 - 0.964 - - - - - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
21. si:dkey-193i10.3 si:dkey-193i10.3 70 0.963 - 0.963 - - - - - - -
22. cldn15la ENSDARG00000016081 197 0.96 - 0.960 - - - - - - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
23. EHD4 ENSDARG00000054302 46 0.958 - 0.958 - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
24. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 0.953 - 0.953 - - - - - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
25. CU928222.1 ENSDARG00000097436 1662 0.952 - 0.952 - - - - - - -
26. CABZ01079764.1 CABZ01079764.1 12103 0.951 - 0.951 - - - - - - -
27. ugt5g1 ENSDARG00000032862, ENSDARG00000111242 222 0.938 - 0.938 - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide G1 [Source:ZFIN;Acc:ZDB-GENE-080305-10]
28. itm2ca ENSDARG00000043448 1265 0.933 - 0.933 - - - - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
29. ptprnb ENSDARG00000077047 2743 0.931 - 0.931 - - - - - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
30. neurog1 ENSDARG00000056130 3924 0.928 - 0.928 - - - - - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
31. znf512 ENSDARG00000041910 20 0.925 - 0.925 - - - - - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
32. ADAMTS3 ENSDARG00000060127 2839 0.924 - 0.924 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
33. ZBTB40 ENSDARG00000091762 57 0.923 - 0.923 - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
34. si:dkey-14d8.9 si:dkey-14d8.9 66 0.922 - 0.922 - - - - - - -
35. her15.2 her15.2 1701 0.92 - 0.920 - - - - - - -
36. angptl7 ENSDARG00000027582, ENSDARG00000110344 1574 0.915 - - - - - - 0.915 - - angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
37. PEG3_30 PEG3_30 60 0.914 - 0.914 - - - - - - -
38. sox19b ENSDARG00000040266 532 0.913 - 0.913 - - - - - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
39. timm17b ENSDARG00000060124 125 0.912 - 0.912 - - - - - - - translocase of inner mitochondrial membrane 17 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-081104-144]
40. ppp1r8 ppp1r8 310 0.912 - 0.912 - - - - - - -
41. si:ch73-190m4.1 ENSDARG00000075785 50 0.911 - 0.911 - - - - - - - si:ch73-190m4.1 [Source:ZFIN;Acc:ZDB-GENE-090311-56]
42. elavl4 ENSDARG00000045639 998 0.909 - 0.909 - - - - - - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
43. CT955963.1 ENSDARG00000100370 23 0.909 - 0.909 - - - - - - -
44. si:ch1073-184j22.2 ENSDARG00000078598 707 0.909 - 0.909 - - - - - - - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
45. sox21b ENSDARG00000008540 1460 0.909 - 0.909 - - - - - - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
46. cdh7 582 0.907 - 0.907 - - - - - - - cadherin 7, type 2, transcript variant X1
47. dbx1a ENSDARG00000086393 3161 0.907 - 0.907 - - - - - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
48. CLIP3 ENSDARG00000054456 734 0.906 - 0.906 - - - - - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
49. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 0.906 - 0.906 - - - - - - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
50. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 0.902 - 0.902 - - - - - - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
51. SLC5A7 SLC5A7 453 0.899 - 0.899 - - - - - - -
52. SSX2IP SSX2IP 316 0.896 - 0.896 - - - - - - -
53. dla ENSDARG00000010791 9281 0.895 - 0.895 - - - - - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
54. dlb ENSDARG00000004232 5120 0.894 - 0.894 - - - - - - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
55. ROBO3_1 ROBO3_1 468 0.892 - 0.892 - - - - - - -
56. BX957337.1 BX957337.1 1685 0.891 - 0.891 - - - - - - -
57. fzd8a ENSDARG00000045444 802 0.89 - 0.890 - - - - - - - frizzled class receptor 8a [Source:ZFIN;Acc:ZDB-GENE-000328-3]
58. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 0.887 - 0.887 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
59. si:ch211-32p8.1 si:ch211-32p8.1 3402 0.887 - 0.887 - - - - - - -
60. col8a2 ENSDARG00000060893 504 0.886 - - - - - - 0.886 - - collagen, type VIII, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060503-488]
61. dlg2 ENSDARG00000099323 162 0.885 - 0.885 - - - - - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
62. sncga ENSDARG00000034423, ENSDARG00000112260 5469 0.885 - 0.885 - - - - - - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
63. SLC3A2_1 SLC3A2_1 358 0.885 - 0.885 - - - - - - -
64. slc22a7a ENSDARG00000056028 2426 0.885 - 0.885 - - - - - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
65. clu ENSDARG00000010434 498 0.883 - 0.883 - - - - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
66. RASIP1 ENSDARG00000074829 113 0.882 - - - - - - 0.882 - - Ras interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-120403-3]
67. aqp8b ENSDARG00000089749 108 0.88 - 0.880 - - - - - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
68. thsd7ba ENSDARG00000095022 231 0.88 - 0.880 - - - - - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
69. olig2 ENSDARG00000040946 1405 0.879 - 0.879 - - - - - - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
70. mb21d2a mb21d2a 421 0.879 - 0.879 - - - - - - -
71. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 0.878 - 0.878 - - - - - - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
72. mcm3_1 ENSDARG00000024204 467 0.878 - 0.878 - - - - - - - minichromosome maintenance complex component 3 [Source:ZFIN;Acc:ZDB-GENE-020419-4]
73. trim101 ENSDARG00000018264 827 0.877 - - - - - - 0.877 - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
74. C5H9orf171 C5H9orf171 34 0.877 - 0.877 - - - - - - -
75. FAM171A2 FAM171A2 707 0.874 - 0.874 - - - - - - -
76. pigv ENSDARG00000101952 173 0.874 - 0.874 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class V [Source:ZFIN;Acc:ZDB-GENE-121116-1]
77. zgc:173702 ENSDARG00000110229 411 0.874 - 0.874 - - - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
78. st18 663 0.874 - 0.874 - - - - - - - suppression of tumorigenicity 18, zinc finger
79. si:dkey-164n2.1 47 0.874 - 0.874 - - - - - - - si:dkey-164n2.1, transcript variant X1
80. clec14a ENSDARG00000103533 718 0.873 - - - - - - 0.873 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
81. serac1 ENSDARG00000056121, ENSDARG00000116580 196 0.872 - 0.872 - - - - - - - serine active site containing 1 [Source:ZFIN;Acc:ZDB-GENE-040616-1]
82. trim35-36 trim35-36 19 0.872 - 0.872 - - - - - - -
83. BCL2 BCL2 122 0.872 - 0.872 - - - - - - -
84. si:dkey-241l7.10 si:dkey-241l7.10 38 0.872 - 0.872 - - - - - - -
85. CCDC84 ENSDARG00000059606 65 0.871 - 0.871 - - - - - - - coiled-coil domain containing 84 [Source:ZFIN;Acc:ZDB-GENE-060929-1174]
86. sox2 ENSDARG00000070913 2763 0.871 - 0.871 - - - - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
87. CU302436.1 ENSDARG00000114500 1619 0.869 - 0.869 - - - - - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
88. aqp8b_1 ENSDARG00000089749 586 0.867 - 0.867 - - - - - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
89. C17H15orf41 C17H15orf41 313 0.867 - 0.867 - - - - - - -
90. slc24a5 ENSDARG00000024771 107 0.866 - 0.866 - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-031210-1]
91. dfnb31a 166 0.865 - 0.865 - - - - - - - deafness, autosomal recessive 31a, transcript variant X3
92. heca ENSDARG00000042877 200 0.865 - 0.865 - - - - - - - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
93. pcdh1gc5 ENSDARG00000104826 10052 0.864 - 0.864 - - - - - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
94. rgs2 ENSDARG00000098761, ENSDARG00000109741 324 0.864 - - - - - - 0.864 - - regulator of G protein signaling 2 [Source:ZFIN;Acc:ZDB-GENE-040718-410]
95. chst3a ENSDARG00000061070 127 0.863 - 0.863 - - - - - - - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
96. lmo2 ENSDARG00000095019 1098 0.862 - - - - - - 0.862 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
97. mir10d-1 mir10d-1 860 0.861 - 0.861 - - - - - - -
98. wdr90 ENSDARG00000079241 1163 0.861 - 0.861 - - - - - - - WD repeat domain 90 [Source:ZFIN;Acc:ZDB-GENE-070424-67]
99. plch2a ENSDARG00000059960 222 0.86 - 0.860 - - - - - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
100. tmem14c tmem14c 1649 0.86 - - - - - - 0.860 - -

There are 680 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA