Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for foxb1a

Gene Name Gene ID Reads Annotation
foxb1a ENSDARG00000089042 101 forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]










Genes with expression patterns similar to foxb1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxb1a ENSDARG00000089042 101 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
2. vwc2 ENSDARG00000076495 22 3.184 0.733 0.704 - - - 1.000 0.747 - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
3. CHRNB4 ENSDARG00000101677 128 2.724 0.916 0.885 - - - - 0.923 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
4. si:ch73-21g5.7 ENSDARG00000093156 9412 2.653 0.929 0.851 - - - - 0.873 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
5. RBPMS ENSDARG00000099396 61 2.652 0.733 1.000 - - - - 0.919 - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
6. si:dkey-253d23.9 ENSDARG00000074820 24 2.618 0.733 - - - - 1.000 0.885 - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
7. dpysl5a ENSDARG00000011141 1827 2.584 0.807 0.884 - - - - 0.893 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
8. nova2 ENSDARG00000017673 7685 2.568 0.858 0.843 - - - - 0.867 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
9. nell2b ENSDARG00000062797 854 2.554 0.760 0.891 - - - - 0.903 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
10. SNAP91 ENSDARG00000098809 556 2.541 0.890 0.851 - - - - 0.800 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
11. CHL1 CHL1 1553 2.536 0.784 0.851 - - - - 0.901 - -
12. sox21b ENSDARG00000008540 1460 2.522 0.817 0.820 - - - - 0.885 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
13. myt1b ENSDARG00000102879 5411 2.519 0.832 0.741 - - - - 0.946 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
14. GJD2 GJD2 1351 2.505 0.754 0.835 - - - - 0.916 - -
15. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.505 0.793 0.889 - - - - 0.823 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
16. CU928222.1 ENSDARG00000097436 1662 2.496 0.932 0.711 - - - - 0.853 - -
17. cadpsb ENSDARG00000070567 458 2.479 0.725 0.946 - - - - 0.808 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
18. FAM171A2 FAM171A2 707 2.475 0.761 0.827 - - - - 0.887 - -
19. hnrnpa3 ENSDARG00000059351 453 2.472 0.879 - - - - 0.713 0.880 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
20. stx1b ENSDARG00000000503 2724 2.459 0.740 0.852 - - - - 0.867 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
21. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.449 0.878 0.750 - - - - 0.821 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
22. cnrip1a ENSDARG00000091683 1491 2.445 0.740 0.812 - - - - 0.893 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
23. gpr88 24 2.437 0.733 0.704 - - - 1.000 - - - G protein-coupled receptor 88
24. nes ENSDARG00000088805 2710 2.428 0.861 0.784 - - - - 0.783 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
25. pcsk1nl ENSDARG00000076170 1232 2.412 0.759 0.881 - - - - 0.772 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
26. sall3b ENSDARG00000057586 982 2.404 0.769 0.859 - - - - 0.776 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
27. sox2 ENSDARG00000070913 2763 2.4 0.838 0.793 - - - - 0.769 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
28. atp1b4 ENSDARG00000053262 1337 2.382 0.803 0.801 - - - - 0.778 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
29. SLC5A7 SLC5A7 453 2.38 0.787 0.776 - - - - 0.817 - -
30. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 2.379 0.753 0.806 - - - - 0.820 - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
31. mpped2 ENSDARG00000034443, ENSDARG00000114674 527 2.374 0.850 0.809 - - - - 0.715 - - metallophosphoesterase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8903]
32. syt11a ENSDARG00000057913 1145 2.347 0.727 0.854 - - - - 0.766 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
33. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.333 0.713 0.744 - - - - 0.876 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
34. nadl1.1 1200 2.319 0.790 0.776 - - - - 0.753 - - neural adhesion molecule L1.1, transcript variant X1
35. CABZ01029738.1 CABZ01029738.1 327 2.304 0.718 0.759 - - - - 0.827 - -
36. PARP6 PARP6 119 2.297 0.780 0.704 - - - - 0.813 - -
37. rab39b rab39b 449 2.243 0.751 0.712 - - - - 0.780 - -
38. gpr22 gpr22 115 2.23 - 0.704 - - - 0.819 0.707 - -
39. grm2a ENSDARG00000004150 64 2.208 0.733 0.704 - - - 0.771 - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
40. rnf165a ENSDARG00000077906 133 1.919 - - - - - 1.000 0.919 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
41. rpz3 ENSDARG00000069728 11 1.885 - - - - - 1.000 0.885 - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
42. nr4a2a ENSDARG00000017007 140 1.885 - - - - - 1.000 0.885 - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
43. slc32a1 ENSDARG00000059775 1092 1.858 - 0.986 - - - - 0.872 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
44. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.853 - 0.989 - - - - 0.864 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
45. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1.852 - - - - - 1.000 0.852 - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]
46. lrrc4.1 ENSDARG00000069402 323 1.833 - 1.000 - - - - 0.833 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
47. scn8aa ENSDARG00000005775 792 1.822 - 0.863 - - - - 0.959 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
48. r3hdm4 ENSDARG00000063254 201 1.803 - - - - - 1.000 0.803 - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
49. jag1a ENSDARG00000030289 1275 1.802 - 0.921 - - - - 0.881 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
50. chat chat 463 1.801 0.906 - - - - - 0.895 - -
51. slc18a3a ENSDARG00000006356 1285 1.797 0.938 - - - - - 0.859 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
52. neurod neurod 1189 1.796 0.936 0.860 - - - - - - -
53. rnft2 ENSDARG00000053019 270 1.794 - 0.978 - - - - 0.816 - - ring finger protein, transmembrane 2 [Source:ZFIN;Acc:ZDB-GENE-050522-168]
54. map2 ENSDARG00000055052 6062 1.793 0.897 - - - - - 0.896 - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
55. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.787 0.866 - - - - - 0.921 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
56. tmie ENSDARG00000069423 305 1.787 0.888 - - - - - 0.899 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
57. nkx6.2 ENSDARG00000104735 5081 1.786 0.904 - - - - - 0.882 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
58. dla ENSDARG00000010791 9281 1.784 0.905 - - - - - 0.879 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
59. si:ch211-152f6.6 si:ch211-152f6.6 278 1.781 - 0.885 - - - - 0.896 - -
60. amph ENSDARG00000007663 599 1.763 - 0.846 - - - - 0.917 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
61. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.762 - - - - - 0.937 0.825 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
62. TUSC5 TUSC5 1436 1.757 - 0.871 - - - - 0.886 - -
63. stmn2b ENSDARG00000070537 1586 1.757 - 0.813 - - - - 0.944 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
64. tac3a ENSDARG00000093089, ENSDARG00000110723 75 1.748 - - - - - 0.807 0.941 - - tachykinin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-253]
65. si:dkey-15f23.2 si:dkey-15f23.2 2 1.747 - - - - - 1.000 0.747 - -
66. mir124-6 64 1.747 - - - - - 1.000 0.747 - - microRNA 124-6
67. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1.747 - - - - - 1.000 0.747 - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
68. gng2 ENSDARG00000056831 81 1.747 - - - - - 1.000 0.747 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
69. si:ch211-76l23.5 si:ch211-76l23.5 26 1.747 - - - - - 1.000 0.747 - -
70. sv2bb ENSDARG00000060711 196 1.738 - 0.867 - - - - 0.871 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
71. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.736 0.837 - - - - - 0.899 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
72. nbn ENSDARG00000040303 43 1.735 0.735 - - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
73. calca ENSDARG00000056590 150 1.734 0.947 - - - - - 0.787 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
74. CR356223.4 CR356223.4 42 1.733 0.733 - - - - 1.000 - - -
75. znf652 ENSDARG00000062302 17 1.733 0.733 1.000 - - - - - - - zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
76. LRRC71 LRRC71 11 1.733 0.733 - - - - 1.000 - - -
77. rx3 ENSDARG00000052893 43 1.733 0.733 - - - - 1.000 - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
78. ROBO3_1 ROBO3_1 468 1.733 0.799 - - - - - 0.934 - -
79. si:ch211-202m22.1 ENSDARG00000094491 24 1.733 0.733 - - - - 1.000 - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
80. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.73 0.907 - - - - - 0.823 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
81. PRKAR2B ENSDARG00000036446 812 1.727 0.812 - - - - - 0.915 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
82. gria2b ENSDARG00000052765 188 1.726 - 0.891 - - - - 0.835 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
83. BX640518.1 BX640518.1 24 1.725 0.725 - - - - 1.000 - - -
84. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1.725 0.725 - - - - 1.000 - - -
85. pou3f2a ENSDARG00000070220 817 1.722 - - - - - 0.767 0.955 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
86. pdzrn4 ENSDARG00000045687 362 1.716 0.892 - - - - - 0.824 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
87. CR524483.1 ENSDARG00000109248 86 1.712 - - - - - 0.844 0.868 - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
88. gfap ENSDARG00000025301 5584 1.709 0.847 - - - - - 0.862 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
89. si:ch211-247j9.1 ENSDARG00000079283 217 1.709 0.782 - - - - - 0.927 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
90. clstn1 ENSDARG00000031720 5286 1.708 0.903 - - - - - 0.805 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
91. si:dkey-169l5.3 si:dkey-169l5.3 239 1.708 0.835 - - - - - 0.873 - -
92. mapk12b ENSDARG00000006409 2246 1.706 - 0.825 - - - - 0.881 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
93. si:ch73-346o4.3 si:ch73-346o4.3 29 1.704 - 0.704 - - - 1.000 - - -
94. nitr3a_1 ENSDARG00000110676 44 1.704 - 0.704 - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
95. nrarpb ENSDARG00000018958 6225 1.703 0.864 - - - - - 0.839 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
96. vim ENSDARG00000010008 3551 1.702 0.872 - - - - - 0.830 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
97. neurog1 ENSDARG00000056130 3924 1.7 0.844 - - - - - 0.856 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
98. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 1.698 0.830 - - - - - 0.868 - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
99. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.697 0.872 - - - - - 0.825 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
100. ttc9b ENSDARG00000068421 251 1.693 0.826 0.867 - - - - - - - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]

There are 1942 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA