Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for foxa

Gene Name Gene ID Reads Annotation
foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]










Genes with expression patterns similar to foxa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 5 1.000 - 1.000 1.000 - - 1.000 1.000 - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
2. BX000348.1 BX000348.1 2 2 1.000 - - - - - - 1.000 -
3. antxr1a ENSDARG00000025672 32 1.972 - - 0.972 - - - 1.000 - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
4. DNAI1 DNAI1 11 1.96 0.960 - - - - - 1.000 - -
5. CU457778.1 ENSDARG00000098976 38 1.938 0.938 - - - - - 1.000 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
6. si:ch73-381a20.2 si:ch73-381a20.2 11 1.936 0.984 - - - - - 0.952 - -
7. LYPLAL1 ENSDARG00000088764 87 1.925 0.978 - - - - - 0.947 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
8. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1.915 - - - 0.915 - - 1.000 - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
9. si:ch211-81g2.1 si:ch211-81g2.1 5 1.915 - - - 0.915 - - 1.000 - -
10. rfc4 ENSDARG00000042458 2 1.915 - - - 0.915 - - 1.000 - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
11. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1.889 - - 0.889 - - - 1.000 - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
12. acy3.1 ENSDARG00000093003 54 1.808 - - 0.818 - - - 0.990 - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
13. MTERFD2 MTERFD2 140 1.805 0.882 - - - - - 0.923 - -
14. FAM132B FAM132B 39 1.76 0.880 - - - - - 0.880 - -
15. si:dkey-97l20.5 si:dkey-97l20.5 33 1.703 - - 0.788 - - - 0.915 - -
16. rps8b ENSDARG00000057368 68 1.673 0.933 - - - - - - 0.740 - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
17. CDH16 ENSDARG00000077570 78 1.664 - - 0.939 - - - - 0.725 - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
18. PCDH8 ENSDARG00000102185 52 1.563 0.852 - - - - - 0.711 - - protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
19. CU693366.1 CU693366.1 186 1.478 0.714 - - - - - 0.764 - -
20. sass6 ENSDARG00000058346 225 1.474 - - - 0.714 - - 0.760 - - SAS-6 centriolar assembly protein [Source:ZFIN;Acc:ZDB-GENE-040426-2784]
21. xrcc5 ENSDARG00000099298 835 1.461 - - - 0.744 - - 0.717 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
22. cacnb4b ENSDARG00000062174 159 1.455 0.735 - - - - - 0.720 - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
23. si:dkey-4c15.5 si:dkey-4c15.5 36 1 - - - - - - 1.000 - -
24. CU929225.1 CU929225.1 104 1 - - - - - - 1.000 - -
25. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - - - - 1.000 - -
26. CDH18 ENSDARG00000102769 4 1 1.000 - - - - - - - - cadherin 18 [Source:HGNC Symbol;Acc:HGNC:1757]
27. si:ch1073-416j23.1 ENSDARG00000055934 4 1 1.000 - - - - - - - - si:ch1073-416j23.1 [Source:ZFIN;Acc:ZDB-GENE-100922-35]
28. HYKK_1 HYKK_1 4 1 - - - - - - 1.000 - -
29. MUC5AC MUC5AC 32 1 - - - - - - 1.000 - -
30. CABZ01112732.1 ENSDARG00000068453 4 1 1.000 - - - - - - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
31. cyp2k8 ENSDARG00000101190 69 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
32. n6amt2 7 1 - - - - - - 1.000 - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
33. lcp2a ENSDARG00000055955 23 1 1.000 - - - - - - - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
34. THSD7B THSD7B 15 1 1.000 - - - - - - - -
35. batf3 ENSDARG00000042577 34 1 - - - - - - 1.000 - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
36. CR478286.1 CR478286.1 3 1 1.000 - - - - - - - -
37. BX548011.3 ENSDARG00000113526 2 1 - - - - - - 1.000 - -
38. capn3a ENSDARG00000041864 89 1 1.000 - - - - - - - - calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
39. si:dkey-1b17.3 si:dkey-1b17.3 16 1 - - - - - - 1.000 - -
40. ATG4D_1 ATG4D_1 1 1 1.000 - - - - - - - -
41. rag1 ENSDARG00000052122 13 1 1.000 - - - - - - - - recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
42. CNGB3 CNGB3 7 1 - - - - - - - 1.000 -
43. ARHGEF40 ENSDARG00000078979 25 1 - - - - - - 1.000 - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
44. polm ENSDARG00000103470 49 1 - - - - - - 1.000 - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
45. HIST1H2BA ENSDARG00000116654 10 1 - - - - - - 1.000 - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
46. si:dkey-19n13.5 si:dkey-19n13.5 36 1 1.000 - - - - - - - -
47. si:dkey-148b12.4 si:dkey-148b12.4 2 1 1.000 - - - - - - - -
48. CABZ01030262.1 CABZ01030262.1 11 1 - - - - - - - 1.000 -
49. irf1b ENSDARG00000043249 30 1 1.000 - - - - - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
50. PROC PROC 11 1 - - - - - - 1.000 - -
51. tcf23 ENSDARG00000087381 6 1 - - - - - - 1.000 - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
52. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - - 1.000 - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
53. klc1a ENSDARG00000009796 10 1 1.000 - - - - - - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
54. si:dkey-258p11.3 si:dkey-258p11.3 9 1 - - - - - - 1.000 - -
55. SNORA14 SNORA14 10 1 - - - - - - - 1.000 -
56. GPR114 GPR114 1 1 - - - - - - 1.000 - -
57. MEP1B ENSDARG00000037533, ENSDARG00000115538 10 1 - - - - - - 1.000 - - meprin A, beta [Source:ZFIN;Acc:ZDB-GENE-041014-209]
58. diaph3_1 ENSDARG00000090785 3 1 - - - - - - - 1.000 - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
59. si:dkey-151g22.1 ENSDARG00000098452 1 1 1.000 - - - - - - - - si:dkey-151g22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-115]
60. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - - - - 1.000 - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
61. M1AP ENSDARG00000099485 1 1 - - - - - - 1.000 - - meiosis 1 associated protein [Source:ZFIN;Acc:ZDB-GENE-070410-19]
62. slco2a1 ENSDARG00000061896 58 1 - - - - - - 1.000 - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
63. FP245525.1 FP245525.1 3 1 1.000 - - - - - - - -
64. sult1st3 ENSDARG00000018361 7 1 - - - - - - 1.000 - - sulfotransferase family 1, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-030804-28]
65. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 - - - - - - 1.000 - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
66. dcbld1 ENSDARG00000015907 36 1 - - - - - - 1.000 - - discoidin, CUB and LCCL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050913-77]
67. SLC4A8 ENSDARG00000015531 16 1 1.000 - - - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
68. Metazoa_SRP_9 Metazoa_SRP_9 26 1 - - - - - - - 1.000 -
69. si:ch211-198b21.6 si:ch211-198b21.6 1 1 - - - - - - 1.000 - -
70. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 1 1.000 - - - - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
71. fip1l1a ENSDARG00000043328 7 1 - - - - - - - 1.000 - FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
72. RGS14 RGS14 15 1 - - - 1.000 - - - - -
73. si:dkey-196n19.5 si:dkey-196n19.5 6 1 - - - - - - 1.000 - -
74. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1 - - - - - - 1.000 - - sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
75. CLDND1_1 CLDND1_1 50 1 - - - - - - 1.000 - -
76. il34 ENSDARG00000091003 14 1 1.000 - - - - - - - - interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
77. CR854899.1 ENSDARG00000102357 8 1 - - - - - - 1.000 - -
78. ZNF70_14 ZNF70_14 19 1 1.000 - - - - - - - -
79. zgc:136930 ENSDARG00000055192 1208 1 1.000 - - - - - - - - zgc:136930 [Source:ZFIN;Acc:ZDB-GENE-060312-16]
80. cyp46a2 cyp46a2 38 1 1.000 - - - - - - - -
81. si:dkey-57c22.1 ENSDARG00000093846 12 1 1.000 - - - - - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
82. sts ENSDARG00000053241 10 1 - - - - - - 1.000 - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
83. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - 1.000 - -
84. CR848814.2 CR848814.2 19 1 1.000 - - - - - - - -
85. grid1b ENSDARG00000044161 20 1 - - - - - - 1.000 - - glutamate receptor, ionotropic, delta 1b [Source:ZFIN;Acc:ZDB-GENE-121214-84]
86. CR388163.1 ENSDARG00000096928 5 1 1.000 - - - - - - - -
87. CABZ01054405.2 CABZ01054405.2 46 1 1.000 - - - - - - - -
88. ENSDARG00000089996 ENSDARG00000089996 17 1 1.000 - - - - - - - -
89. adrb3b ENSDARG00000052919 16 1 - - - - - - 1.000 - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
90. lrp2bp ENSDARG00000040478 21 1 - - - - - - 1.000 - - LRP2 binding protein [Source:ZFIN;Acc:ZDB-GENE-070615-41]
91. TRPM6 ENSDARG00000103454 15 1 - - - - - - 1.000 - - transient receptor potential cation channel, subfamily M, member 6 [Source:ZFIN;Acc:ZDB-GENE-111212-1]
92. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - - - - - - 1.000 - -
93. C2CD5 ENSDARG00000094590 1 1 - - - - - - - 1.000 - C2 calcium-dependent domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-041114-193]
94. si:dkey-19a16.7 ENSDARG00000071644 460 1 - - - - - - 1.000 - - si:dkey-19a16.7 [Source:ZFIN;Acc:ZDB-GENE-060503-903]
95. nfil3-4 ENSDARG00000092346 3 1 - - - - - - 1.000 - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
96. BX470224.1 ENSDARG00000092793 22 1 - - - - - - 1.000 - -
97. GAS2 18 1 1.000 - - - - - - - - growth arrest specific 2, transcript variant X1
98. adipoqa ENSDARG00000062228 7 1 - - - - - - 1.000 - - adiponectin, C1Q and collagen domain containing, a [Source:ZFIN;Acc:ZDB-GENE-080423-2]
99. ccdc33 ENSDARG00000051858 11 1 1.000 - - - - - - - - coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1]
100. CU302436.1_1 ENSDARG00000114500 18 1 1.000 - - - - - - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]

There are 791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA