Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for fndc1

Gene Name Gene ID Reads Annotation
fndc1 ENSDARG00000002847 178 fibronectin type III domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-332]










Genes with expression patterns similar to fndc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fndc1 ENSDARG00000002847 178 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fibronectin type III domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-332]
2. stim2 stim2 278 2.514 - 0.886 - 0.898 - - - - 0.730
3. hsd17b4 ENSDARG00000101239 301 1.907 - 0.995 - 0.912 - - - - - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
4. mybpc1 ENSDARG00000045560 26 1.861 - 0.973 - - - - - 0.888 - myosin binding protein C, slow type [Source:ZFIN;Acc:ZDB-GENE-041114-196]
5. CR356223.4 CR356223.4 42 1.835 0.862 0.973 - - - - - - -
6. stpg1 ENSDARG00000103765 19 1.835 0.862 0.973 - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
7. GMIP ENSDARG00000077249 43 1.792 - - - 0.960 - - - 0.832 - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
8. NOTUM NOTUM 232 1.774 - 0.942 - - - - - - 0.832
9. upk1a ENSDARG00000021866 9 1.768 - 0.973 0.795 - - - - - - uroplakin 1a [Source:ZFIN;Acc:ZDB-GENE-060421-2603]
10. si:ch211-190k17.19 ENSDARG00000095756 19 1.762 0.862 - - - - - - 0.900 - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
11. si:ch211-199g17.2 ENSDARG00000092310 243 1.762 - 0.852 - 0.910 - - - - - si:ch211-199g17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-396]
12. zgc:174877 ENSDARG00000079278 143 1.734 0.941 - 0.793 - - - - - - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
13. fastkd1 ENSDARG00000056128 141 1.723 0.862 - - - - - - 0.861 - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
14. ppp1r3da ENSDARG00000077513 109 1.714 - 0.948 - - - - 0.766 - - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
15. nrg2b ENSDARG00000086585 100 1.698 - 0.973 - - - - - - 0.725 neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
16. zgc:171220 ENSDARG00000102959 164 1.697 - 0.973 0.724 - - - - - - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
17. olah ENSDARG00000058502 100 1.696 0.723 0.973 - - - - - - - oleoyl-ACP hydrolase [Source:ZFIN;Acc:ZDB-GENE-060312-17]
18. zgc:171626 zgc:171626 42 1.686 0.862 0.824 - - - - - - -
19. CABZ01074899.1 CABZ01074899.1 89 1.676 - 0.905 - - 0.771 - - - -
20. LPHN3 LPHN3 195 1.674 - 0.882 - - - - 0.792 - -
21. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 1.673 - - - 0.873 - - - - 0.800 solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
22. HAP1 HAP1 481 1.669 - - - 0.965 - - - 0.704 -
23. ZNF784_2 ZNF784_2 181 1.664 - 0.835 - - - - - - 0.829
24. ASTL ASTL 24 1.662 - - 0.795 - - - - - 0.867
25. znf711 ENSDARG00000071868, ENSDARG00000111963 75 1.653 0.796 0.857 - - - - - - - zinc finger protein 711 [Source:ZFIN;Acc:ZDB-GENE-081107-49]
26. cnfn ENSDARG00000041115 21 1.65 0.862 0.788 - - - - - - - cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
27. ybey ENSDARG00000011999, ENSDARG00000110510 73 1.634 - - - 0.920 - - - 0.714 - ybeY metalloendoribonuclease [Source:ZFIN;Acc:ZDB-GENE-030131-437]
28. nphp3 ENSDARG00000078261 110 1.626 - - 0.714 - - - - 0.912 - nephronophthisis 3 [Source:ZFIN;Acc:ZDB-GENE-091204-117]
29. sdr42e1 ENSDARG00000098838 25 1.625 0.862 - 0.763 - - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
30. SLC6A7 ENSDARG00000030006 304 1.624 - 0.857 - - - - - 0.767 - solute carrier family 6 member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-1492]
31. zfr2 ENSDARG00000071683 780 1.621 - - - 0.869 - - 0.752 - - zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
32. sacs ENSDARG00000091042 314 1.619 - - - - - - - 0.788 0.831 sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
33. STYK1 108 1.615 - 0.793 - - - - - - 0.822 serine/threonine/tyrosine kinase 1
34. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 1.61 - 0.774 - - - - - - 0.836 si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
35. zdhhc16b ENSDARG00000015989 193 1.608 - - - 0.863 - - 0.745 - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
36. vps26bl ENSDARG00000055433 645 1.595 - 0.797 - 0.798 - - - - - vacuolar protein sorting 26 homolog B, like [Source:ZFIN;Acc:ZDB-GENE-040718-112]
37. CR382298.3 CR382298.3 666 1.582 - - - 0.850 - - - 0.732 -
38. atrnl1a ENSDARG00000077188 66 1.574 0.862 - - - - - 0.712 - - attractin-like 1a [Source:ZFIN;Acc:ZDB-GENE-081028-60]
39. got1l1 ENSDARG00000053644 49 1.565 - 0.823 0.742 - - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
40. CEACAM7 CEACAM7 46 1.562 - 0.810 - - 0.752 - - - -
41. jdp2 jdp2 301 1.557 - - - 0.835 - - - - 0.722
42. atp13a2 ENSDARG00000061890, ENSDARG00000117108 294 1.549 - - - - - - 0.777 0.772 - ATPase cation transporting 13A2 [Source:ZFIN;Acc:ZDB-GENE-061215-126]
43. tnnt1 ENSDARG00000037954 104 1.548 - - - - - 0.700 - 0.848 - troponin T type 1 (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-080723-27]
44. cpox ENSDARG00000062025 286 1.524 - - - 0.729 - - 0.795 - - coproporphyrinogen oxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9884]
45. fam129aa ENSDARG00000042055 222 1.516 - 0.752 - - - - 0.764 - - family with sequence similarity 129, member Aa [Source:ZFIN;Acc:ZDB-GENE-041014-181]
46. mutyh 512 1.507 0.798 - - - - - - - 0.709 mutY DNA glycosylase
47. CU694219.1 CU694219.1 699 1.497 - 0.764 - - - - - 0.733 -
48. rnf213b ENSDARG00000103551 63 1.489 - - 0.763 - - - - - 0.726 ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
49. med20 ENSDARG00000046006 614 1.482 - 0.743 - 0.739 - - - - - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
50. zgc:101129 zgc:101129 641 1.454 - 0.746 - - - - 0.708 - -
51. SNORA73_1 SNORA73_1 85 1.413 - 0.708 0.705 - - - - - -
52. pycrl pycrl 80 1 1.000 - - - - - - - -
53. snx24 ENSDARG00000053527 31 1 1.000 - - - - - - - - sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
54. AL840631.3 AL840631.3 82 1 1.000 - - - - - - - -
55. slco4a1 ENSDARG00000075948 74 0.987 - 0.987 - - - - - - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
56. si:dkeyp-10a3.2 18 0.987 0.987 - - - - - - - - si:dkeyp-10a3.2
57. dpf1 ENSDARG00000099927, ENSDARG00000115986 138 0.975 - 0.975 - - - - - - - D4, zinc and double PHD fingers family 1 [Source:ZFIN;Acc:ZDB-GENE-050913-31]
58. st6galnac1.2 ENSDARG00000043816 51 0.975 - 0.975 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
59. ttll2 ENSDARG00000077853 9 0.975 - 0.975 - - - - - - - tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
60. herc3 ENSDARG00000075887 41 0.973 - 0.973 - - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
61. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.973 - 0.973 - - - - - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
62. si:dkey-45k15.1 ENSDARG00000061714 32 0.973 - 0.973 - - - - - - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
63. MAP3K13 ENSDARG00000009493 8 0.973 - 0.973 - - - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
64. lacc1 ENSDARG00000076914 11 0.973 - 0.973 - - - - - - - laccase (multicopper oxidoreductase) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-155]
65. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 0.973 - 0.973 - - - - - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
66. RCVRN RCVRN 66 0.973 - 0.973 - - - - - - -
67. MDFI ENSDARG00000089564 8 0.973 - 0.973 - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
68. ENKD1 ENSDARG00000043550 44 0.973 - 0.973 - - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
69. fam86a fam86a 174 0.973 - 0.973 - - - - - - -
70. SH3TC1 ENSDARG00000077330 8 0.973 - 0.973 - - - - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
71. pax1b ENSDARG00000073814 105 0.973 - 0.973 - - - - - - - paired box 1b [Source:ZFIN;Acc:ZDB-GENE-060503-372]
72. si:dkey-211g8.6 ENSDARG00000063088 19 0.973 - 0.973 - - - - - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
73. si:dkey-111b14.5 si:dkey-111b14.5 10 0.973 - 0.973 - - - - - - -
74. btr16 ENSDARG00000028850 21 0.973 - 0.973 - - - - - - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
75. CABZ01069022.1 ENSDARG00000105692 16 0.973 - 0.973 - - - - - - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
76. si:dkey-96l17.6 ENSDARG00000094540 4 0.973 - 0.973 - - - - - - - si:dkey-96l17.6 [Source:ZFIN;Acc:ZDB-GENE-060526-350]
77. cryba2a ENSDARG00000030349 1342 0.973 - 0.973 - - - - - - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
78. si:ch211-202h22.9 ENSDARG00000079980 2 0.973 - 0.973 - - - - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
79. fam178a fam178a 29 0.973 - 0.973 - - - - - - -
80. si:busm1-228j01.5 si:busm1-228j01.5 9 0.973 - 0.973 - - - - - - -
81. CYP46A1 CYP46A1 16 0.973 - 0.973 - - - - - - -
82. rnh1 ENSDARG00000086631 14 0.973 - 0.973 - - - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
83. NUGGC NUGGC 9 0.973 - 0.973 - - - - - - -
84. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 0.973 - 0.973 - - - - - - - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
85. gfpt1 ENSDARG00000057465 14 0.973 - 0.973 - - - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
86. mylkb ENSDARG00000004753 95 0.973 - 0.973 - - - - - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
87. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 0.973 - 0.973 - - - - - - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
88. CAPN2 CAPN2 1497 0.973 - 0.973 - - - - - - -
89. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 0.973 - 0.973 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
90. si:ch211-278p9.1 ENSDARG00000087532 18 0.973 - 0.973 - - - - - - - si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
91. si:ch211-217k17.8 ENSDARG00000095434 3 0.973 - 0.973 - - - - - - - si:ch211-217k17.8 [Source:ZFIN;Acc:ZDB-GENE-031010-46]
92. si:dkey-88n24.8 ENSDARG00000091095 9 0.973 - 0.973 - - - - - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
93. tmprss4b ENSDARG00000012860 6 0.973 - 0.973 - - - - - - - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
94. BX321875.4 ENSDARG00000114661 5 0.973 - 0.973 - - - - - - -
95. gphb5 ENSDARG00000027472 8 0.973 - 0.973 - - - - - - - glycoprotein hormone beta 5 [Source:ZFIN;Acc:ZDB-GENE-090319-4]
96. CU929036.1 CU929036.1 7 0.973 - 0.973 - - - - - - -
97. cidea ENSDARG00000098245 2 0.973 - 0.973 - - - - - - - cell death-inducing DFFA-like effector a [Source:ZFIN;Acc:ZDB-GENE-091204-339]
98. baiap2l1a ENSDARG00000029305 30 0.973 - 0.973 - - - - - - - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
99. TPMT TPMT 138 0.973 - 0.973 - - - - - - -
100. st6galnac ENSDARG00000086292 29 0.973 - 0.973 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]

There are 1334 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA