Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for fam53b

Gene Name Gene ID Reads Annotation
fam53b ENSDARG00000016156 2143 family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]










Genes with expression patterns similar to fam53b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fam53b ENSDARG00000016156 2143 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
2. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 2.351 - 0.855 - - - - 0.786 - 0.710 ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
3. tfap4 ENSDARG00000103923 2203 2.296 - 0.711 - - 0.798 - - - 0.787 transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
4. pias4a ENSDARG00000007081 4264 2.272 - 0.820 - - - - 0.707 - 0.745 protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
5. suv39h1b ENSDARG00000055753 1540 2.251 - - - 0.709 - 0.758 - 0.784 - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
6. g6pd ENSDARG00000071065, ENSDARG00000111009 1618 2.245 - 0.779 - - 0.718 - 0.748 - - glucose-6-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070508-4]
7. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 2.213 - - - - 0.755 0.716 - - 0.742 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
8. pum1 ENSDARG00000099256 5017 2.178 - 0.723 - 0.728 - 0.727 - - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
9. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 1.66 0.742 - - - - 0.918 - - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
10. aurkb ENSDARG00000037640 4874 1.645 - - - - - 0.732 - - 0.913 aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
11. bmpr2a ENSDARG00000011941 2972 1.644 - - - - 0.718 0.926 - - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
12. asna1 ENSDARG00000018190 5253 1.615 0.733 - - - - 0.882 - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
13. nrg1 ENSDARG00000104314 1081 1.607 - 0.814 - - - - - - 0.793 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
14. tbc1d5 ENSDARG00000036212 2580 1.607 - - - - - 0.891 - - 0.716 TBC1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1197]
15. zgc:65772 zgc:65772 2092 1.605 - - - - 0.785 - - - 0.820
16. JHDM1D JHDM1D 2277 1.598 - - - - 0.792 - 0.806 - -
17. CR293507.1 ENSDARG00000112572 3198 1.591 - - - - - 0.815 - - 0.776
18. aprt ENSDARG00000003519 686 1.585 - 0.879 - - - - - 0.706 - adenine phosphoribosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1492]
19. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.582 0.775 - - - - - - - 0.807 VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
20. rangap1a ENSDARG00000041317 1456 1.58 - - - - - 0.784 - - 0.796 RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
21. BX294110.1 ENSDARG00000096875 1761 1.58 - 0.725 - - - 0.855 - - -
22. camlg ENSDARG00000100409 2157 1.576 - - - - 0.778 0.798 - - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
23. uso1 ENSDARG00000019581 479 1.572 - 0.717 - - - 0.855 - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
24. ppp4cb ENSDARG00000076439 1693 1.57 - - - - 0.727 - - - 0.843 protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
25. epn2 ENSDARG00000008377 5458 1.568 - - - 0.738 - - - - 0.830 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
26. BX004880.1 BX004880.1 638 1.563 - - - - - 0.807 - - 0.756
27. MIS12 ENSDARG00000026454 649 1.561 - - - - - 0.805 - - 0.756 MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
28. pmepa1 ENSDARG00000039325 652 1.557 - - - - - 0.798 0.759 - - prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
29. TMEM185A TMEM185A 5505 1.556 - - - 0.724 - 0.832 - - -
30. calhm2 ENSDARG00000039482 138 1.556 - - - - - 0.820 - - 0.736 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
31. rybpb ENSDARG00000053459 1464 1.555 - - - - - 0.774 - - 0.781 RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
32. ncapg ENSDARG00000070109, ENSDARG00000109474, ENSDARG00000113314, ENSDARG00000113623 2338 1.554 - - 0.759 - - 0.795 - - - non-SMC condensin I complex, subunit G [Source:ZFIN;Acc:ZDB-GENE-041111-282]
33. h2afy2_1 ENSDARG00000087897 9887 1.553 - - - - - 0.801 0.752 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
34. PPP1R8 PPP1R8 1897 1.551 - 0.748 - - 0.803 - - - -
35. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.551 - - - - 0.724 0.827 - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
36. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.55 - - - - 0.823 - 0.727 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
37. C1H10orf12 C1H10orf12 1663 1.544 - - - - - 0.838 - - 0.706
38. cables1 ENSDARG00000099395 361 1.544 - 0.703 - - - 0.841 - - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
39. si:dkey-238c7.16 ENSDARG00000069537, ENSDARG00000111432 5140 1.543 - - - - - - 0.728 - 0.815 si:dkey-238c7.16 [Source:ZFIN;Acc:ZDB-GENE-030131-4169]
40. tnpo2 ENSDARG00000038239 2469 1.542 - 0.816 - - - - - 0.726 - transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
41. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.537 - - - - - 0.784 - - 0.753 ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
42. CR925758.1 CR925758.1 83 1.537 0.784 0.753 - - - - - - -
43. abcb7 ENSDARG00000062795 1404 1.536 - - - - - 0.781 - - 0.755 ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
44. taf3 ENSDARG00000045513 1819 1.535 - - - - - 0.744 - - 0.791 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto [Source:ZFIN;Acc:ZDB-GENE-030131-6406]
45. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.533 - - - - - 0.743 0.790 - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
46. wdr43 ENSDARG00000077264 1992 1.533 - - - - - 0.739 - - 0.794 WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
47. DTX4 ENSDARG00000076302 2642 1.533 - - - - 0.812 0.721 - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
48. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.529 - - - - - 0.771 - 0.758 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
49. NCBP1 585 1.529 - 0.715 - - - 0.814 - - - nuclear cap binding protein subunit 1
50. rab25a ENSDARG00000058800 451 1.527 0.764 - - - - 0.763 - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
51. TNRC6B ENSDARG00000074161 2464 1.526 - 0.783 - - 0.743 - - - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
52. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.524 - - - - - 0.727 0.797 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
53. C5H9orf78 C5H9orf78 1550 1.524 0.717 - - - - - - - 0.807
54. CLINT1 CLINT1 558 1.523 0.705 - - - - - - - 0.818
55. pex6 ENSDARG00000070958 323 1.523 0.709 - - - - 0.814 - - - peroxisomal biogenesis factor 6 [Source:ZFIN;Acc:ZDB-GENE-081104-252]
56. birc2 ENSDARG00000044619, ENSDARG00000117094 1376 1.522 0.735 0.787 - - - - - - - baculoviral IAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-030825-6]
57. BX649494.1 BX649494.1 195 1.521 0.759 - - - - 0.762 - - -
58. fam60al_1 949 1.52 - - - - - - 0.797 0.723 - family with sequence similarity 60, member A, like
59. sult6b1 ENSDARG00000086826 2070 1.52 - - - - 0.704 - - - 0.816 sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
60. ubr7 ENSDARG00000005536 1108 1.518 - - - - - 0.733 0.785 - - ubiquitin protein ligase E3 component n-recognin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-1535]
61. sf1 ENSDARG00000008188 5142 1.513 - - - - - 0.793 0.720 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
62. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.513 - - - - - 0.742 - - 0.771 discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
63. ctnnbl1 ENSDARG00000011958 2276 1.512 - - - - - - 0.756 - 0.756 catenin, beta like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1850]
64. arl5a ENSDARG00000018627, ENSDARG00000117003 588 1.511 - 0.791 - - - - 0.720 - - ADP-ribosylation factor-like 5A [Source:ZFIN;Acc:ZDB-GENE-040718-28]
65. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 1.51 - - - - - 0.768 - - 0.742 peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
66. ruvbl1 ENSDARG00000002591 2381 1.51 - - - - - 0.702 0.808 - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
67. dscc1 ENSDARG00000019907 720 1.51 0.755 - - - 0.755 - - - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
68. xrcc5_1 ENSDARG00000099298 1533 1.508 - 0.765 - - - - - - 0.743 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
69. CR387996.1 ENSDARG00000097774 3037 1.506 - - - - - 0.777 - - 0.729
70. tmem5 1630 1.503 - - - - 0.746 0.757 - - - transmembrane protein 5
71. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.502 - 0.728 - - 0.774 - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
72. tagln3b ENSDARG00000058394, ENSDARG00000115045 2756 1.501 - 0.701 - - - 0.800 - - - transgelin 3b [Source:ZFIN;Acc:ZDB-GENE-030131-4199]
73. srp9 ENSDARG00000042851 3254 1.501 - - - - - 0.714 0.787 - - signal recognition particle 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1106]
74. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 1.501 - - - - - 0.725 - - 0.776 tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
75. efnb2b_1 ENSDARG00000074050 1094 1.501 - 0.728 - - - 0.773 - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
76. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.499 - - - - - - 0.709 - 0.790 serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
77. CT030712.1 ENSDARG00000044355 83 1.498 - - - - - 0.751 - - 0.747 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
78. BACH1 BACH1 1021 1.497 - - - - - 0.766 - - 0.731
79. krcp ENSDARG00000040224 5961 1.494 - - - - 0.758 - - - 0.736 kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
80. aebp1 ENSDARG00000091726 906 1.493 - 0.746 - - - - - - 0.747 AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
81. plk4 ENSDARG00000004576 688 1.493 0.735 - - - - 0.758 - - - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
82. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.493 - - - - - - 0.772 - 0.721 ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
83. hipk2 ENSDARG00000042518, ENSDARG00000111166 3099 1.491 - - - - - 0.762 0.729 - - homeodomain interacting protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031125-4]
84. wu:fj29h11 ENSDARG00000096562 863 1.489 - 0.732 - - 0.757 - - - - wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
85. leo1 ENSDARG00000055357 1644 1.489 - - - - 0.789 - - 0.700 - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
86. kdm5c ENSDARG00000006124 4389 1.488 - 0.730 - - 0.758 - - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
87. paf1 ENSDARG00000098432 1806 1.488 - - - - 0.747 - - - 0.741 PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
88. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.487 - - - - 0.722 - 0.765 - - hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
89. nup210 ENSDARG00000063333 995 1.486 - - - - 0.734 0.752 - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
90. ddx42 ENSDARG00000037928 1659 1.486 - - - - 0.728 0.758 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
91. ddx27 ENSDARG00000091831 1471 1.485 - - - - 0.726 - - - 0.759 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
92. casp2 ENSDARG00000062052 559 1.482 - - - - - 0.728 - - 0.754 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
93. ap1b1 ENSDARG00000020621 3874 1.482 - 0.769 - - - 0.713 - - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
94. sp1 ENSDARG00000088347 1697 1.482 - - - - 0.735 0.747 - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
95. GRIN2B GRIN2B 140 1.481 - - - - 0.713 0.768 - - -
96. golga7 ENSDARG00000057676 4691 1.48 - 0.754 - - - 0.726 - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
97. riok1 ENSDARG00000016399 936 1.48 - 0.718 - - - - 0.762 - - RIO kinase 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1927]
98. faf2 ENSDARG00000052374 1351 1.48 - 0.746 - - - - - - 0.734 Fas associated factor family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-312]
99. nedd4l ENSDARG00000060006 1669 1.479 - - - - - 0.722 0.757 - - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
100. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.479 - - - - - 0.760 - 0.719 - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]

There are 2089 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA