Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for dub

Gene Name Gene ID Reads Annotation
dub ENSDARG00000059774 1026 duboraya [Source:ZFIN;Acc:ZDB-GENE-060825-81]










Genes with expression patterns similar to dub

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dub ENSDARG00000059774 1026 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 duboraya [Source:ZFIN;Acc:ZDB-GENE-060825-81]
2. rpl12 ENSDARG00000006691, ENSDARG00000114004, ENSDARG00000115546 8591 2.278 - 0.783 - - - 0.754 0.741 - - ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-030131-5297]
3. zgc:92518 ENSDARG00000016343 3837 1.859 - 0.951 - - - - 0.908 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
4. ube2d3 ENSDARG00000038473 4096 1.857 - 0.983 - - - - 0.874 - - ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
5. nexn ENSDARG00000057317 10972 1.822 - 0.968 - - - - 0.854 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
6. CHCHD3 CHCHD3 1425 1.815 - 1.000 - - - - 0.815 - -
7. smtnl1 ENSDARG00000041257 7410 1.792 - 0.963 - - - - 0.829 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
8. aars ENSDARG00000069142, ENSDARG00000113882 10348 1.774 - 0.933 - - - - 0.841 - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
9. cnbpb ENSDARG00000070922 14606 1.773 - 0.955 - - - - 0.818 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
10. cox7c ENSDARG00000104537 12169 1.765 - 0.983 - - - - 0.782 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
11. gulp1a ENSDARG00000001733 1206 1.724 0.724 1.000 - - - - - - - GULP, engulfment adaptor PTB domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-21]
12. lims2 ENSDARG00000014976 1248 1.724 - 0.999 - - - - 0.725 - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
13. hccsa hccsa 869 1.719 - 1.000 - - - - 0.719 - -
14. riok3 ENSDARG00000042751 3163 1.717 - 0.998 - - - - 0.719 - - RIO kinase 3 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-133]
15. agla ENSDARG00000103811 2856 1.636 0.810 - - - - - 0.826 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
16. usp2a ENSDARG00000020107 2586 1.632 - - - - - 0.757 0.875 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
17. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.632 - 0.877 - - - - 0.755 - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
18. hhatla ENSDARG00000039051 6598 1.595 0.704 - - - - - 0.891 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
19. ALDH1L2 ENSDARG00000070230 2550 1.589 0.753 - - - - - 0.836 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
20. par1 par1 564 1.587 - - - 0.731 - - 0.856 - -
21. tnnt3a ENSDARG00000030270 112506 1.573 - 0.816 - - - - 0.757 - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
22. eif2s2 ENSDARG00000053047 15904 1.56 - 0.794 - - - - 0.766 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
23. eif2s1b ENSDARG00000052178 11961 1.551 - - - - - 0.711 0.840 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
24. cacna1sb ENSDARG00000042552 1320 1.536 - - - - - - 0.819 0.717 - calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
25. AL840631.2 AL840631.2 326 1.504 - - - - 0.774 - 0.730 - -
26. col4a2 ENSDARG00000104110 947 1.503 - - - - - 0.711 0.792 - - collagen, type IV, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070725-3]
27. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 1.491 - - - - - 0.720 0.771 - - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
28. dhrs7c dhrs7c 1173 1.488 - - - - 0.713 - 0.775 - -
29. C18H19orf12 C18H19orf12 432 1.483 0.751 - - - - - 0.732 - -
30. mrpl34 ENSDARG00000092954 2052 1.451 0.706 - - - - - 0.745 - - mitochondrial ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-070912-582]
31. klhl32 ENSDARG00000003576 99 1.439 - - - - 0.737 - 0.702 - - kelch-like family member 32 [Source:ZFIN;Acc:ZDB-GENE-070209-47]
32. mrps34 ENSDARG00000057910 2007 1.43 - - - - - 0.726 0.704 - - mitochondrial ribosomal protein S34 [Source:ZFIN;Acc:ZDB-GENE-041114-71]
33. ercc6l ENSDARG00000002479 1535 1 - 1.000 - - - - - - - excision repair cross-complementation group 6-like [Source:ZFIN;Acc:ZDB-GENE-060531-56]
34. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 1 - 1.000 - - - - - - - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
35. creg1 ENSDARG00000105154 843 1 - 1.000 - - - - - - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
36. NUAK1_1 NUAK1_1 1782 1 - 1.000 - - - - - - -
37. cpe ENSDARG00000055874, ENSDARG00000116033 2981 1 - 1.000 - - - - - - - carboxypeptidase E [Source:ZFIN;Acc:ZDB-GENE-090313-68]
38. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 1 - 1.000 - - - - - - - polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
39. STMN3 ENSDARG00000038465 1009 1 - 1.000 - - - - - - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
40. MED17 ENSDARG00000006345 779 1 - 1.000 - - - - - - - mediator complex subunit 17 [Source:ZFIN;Acc:ZDB-GENE-040302-1]
41. nanos1 ENSDARG00000109337 2494 1 - 1.000 - - - - - - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
42. TMPPE ENSDARG00000036059, ENSDARG00000114955 567 1 - 1.000 - - - - - - - transmembrane protein with metallophosphoesterase domain [Source:ZFIN;Acc:ZDB-GENE-061013-104]
43. rmi1 ENSDARG00000041376 674 1 - 1.000 - - - - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
44. si:dkey-197c15.6 ENSDARG00000079401 745 1 - 1.000 - - - - - - - si:dkey-197c15.6 [Source:ZFIN;Acc:ZDB-GENE-060810-147]
45. dact1 ENSDARG00000101635 1303 1 - 1.000 - - - - - - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
46. decr1 ENSDARG00000003869 1344 1 - 1.000 - - - - - - - 2,4-dienoyl CoA reductase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-142]
47. nit2 ENSDARG00000017590 1393 1 - 1.000 - - - - - - - nitrilase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-65]
48. MAP3K15 ENSDARG00000013310, ENSDARG00000110884 1232 1 - 1.000 - - - - - - - mitogen-activated protein kinase kinase kinase 15 [Source:ZFIN;Acc:ZDB-GENE-091204-246]
49. rasef ENSDARG00000076250 1359 1 - 1.000 - - - - - - - RAS and EF-hand domain containing [Source:ZFIN;Acc:ZDB-GENE-081105-157]
50. TMEM200B TMEM200B 554 1 - 1.000 - - - - - - -
51. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1 - 1.000 - - - - - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
52. stag1b ENSDARG00000062137 1814 1 - 1.000 - - - - - - - stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
53. SERP1 ENSDARG00000076223 2528 0.999 - 0.999 - - - - - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
54. surf6 ENSDARG00000035427 1695 0.999 - 0.999 - - - - - - - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
55. murca murca 6614 0.999 - 0.999 - - - - - - -
56. rdh10a ENSDARG00000058730, ENSDARG00000113421 1914 0.999 - 0.999 - - - - - - - retinol dehydrogenase 10a [Source:ZFIN;Acc:ZDB-GENE-070112-2242]
57. FAM3D ENSDARG00000091625 1392 0.999 - 0.999 - - - - - - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
58. dyrk1b ENSDARG00000070187 2777 0.999 - 0.999 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
59. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 0.999 - 0.999 - - - - - - - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
60. MRPL42 ENSDARG00000079391 1403 0.999 - 0.999 - - - - - - - mitochondrial ribosomal protein L42 [Source:ZFIN;Acc:ZDB-GENE-101014-1]
61. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 0.999 - 0.999 - - - - - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
62. rad21a_1 ENSDARG00000006092 4482 0.999 - 0.999 - - - - - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
63. mbnl2 ENSDARG00000018460 3328 0.999 - 0.999 - - - - - - - muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
64. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 0.999 - 0.999 - - - - - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
65. RABGAP1 ENSDARG00000098967 933 0.999 - 0.999 - - - - - - - RAB GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-170622-1]
66. me3 ENSDARG00000002305 3305 0.999 - 0.999 - - - - - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
67. acvr2ab ENSDARG00000104700 1569 0.999 - 0.999 - - - - - - - activin A receptor type 2Ab [Source:ZFIN;Acc:ZDB-GENE-120215-23]
68. nup133 ENSDARG00000010078 2373 0.999 - 0.999 - - - - - - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
69. med10 ENSDARG00000070623 5134 0.998 - 0.998 - - - - - - - mediator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-070117-2423]
70. eif4a3 ENSDARG00000102978 16162 0.998 - 0.998 - - - - - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
71. PHLPP1 ENSDARG00000078694 2466 0.998 - 0.998 - - - - - - - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
72. dpp4 ENSDARG00000079420 1286 0.998 - 0.998 - - - - - - - dipeptidyl-peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-081104-277]
73. ndufa7 ENSDARG00000036684 6051 0.998 - 0.998 - - - - - - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
74. atp1b3b ENSDARG00000042837 5163 0.997 - 0.997 - - - - - - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
75. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 0.997 - 0.997 - - - - - - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
76. fbl ENSDARG00000053912 5891 0.997 - 0.997 - - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
77. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 0.997 - 0.997 - - - - - - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
78. CABZ01081490.1 ENSDARG00000111653 11892 0.997 - 0.997 - - - - - - -
79. nfe2l3 ENSDARG00000019810 3682 0.997 - 0.997 - - - - - - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
80. hnrnph1l ENSDARG00000005551 8727 0.996 - 0.996 - - - - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
81. psmb4 ENSDARG00000054696 8100 0.996 - 0.996 - - - - - - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
82. cnot6 cnot6 7029 0.996 - 0.996 - - - - - - -
83. plscr3b ENSDARG00000069432 8500 0.995 - 0.995 - - - - - - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
84. txndc17 ENSDARG00000058079 3533 0.995 - 0.995 - - - - - - - thioredoxin domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040801-193]
85. psmd13 ENSDARG00000016239 4229 0.994 - 0.994 - - - - - - - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
86. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 0.993 - 0.993 - - - - - - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
87. stab2 ENSDARG00000045748, ENSDARG00000111479 2952 0.992 - 0.992 - - - - - - - stabilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-336]
88. acsf2 ENSDARG00000061201 4413 0.992 - 0.992 - - - - - - - acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
89. coq10b ENSDARG00000056141 1532 0.983 - 0.983 - - - - - - - coenzyme Q10B [Source:ZFIN;Acc:ZDB-GENE-050417-263]
90. rer1 ENSDARG00000012747 6939 0.982 - 0.982 - - - - - - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
91. s100v1 ENSDARG00000070427 6633 0.982 - 0.982 - - - - - - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
92. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 0.982 - 0.982 - - - - - - - Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
93. sf3b14 sf3b14 9434 0.981 - 0.981 - - - - - - -
94. znf706 ENSDARG00000056307 12518 0.979 - 0.979 - - - - - - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
95. cmn ENSDARG00000055527 14039 0.978 - 0.978 - - - - - - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
96. eif2a ENSDARG00000101061 3800 0.967 - 0.967 - - - - - - - eukaryotic translation initiation factor 2A [Source:ZFIN;Acc:ZDB-GENE-050626-52]
97. si:ch1073-286c18.5 ENSDARG00000098567 7391 0.938 - 0.938 - - - - - - - si:ch1073-286c18.5 [Source:ZFIN;Acc:ZDB-GENE-121214-240]
98. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 0.937 - 0.937 - - - - - - - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
99. hsp90aa1.1 ENSDARG00000010478 47784 0.937 - - - - - - 0.937 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
100. HNRNPAB HNRNPAB 22267 0.934 - 0.934 - - - - - - -

There are 804 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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