Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for dmrt1

Gene Name Gene ID Reads Annotation
dmrt1 ENSDARG00000007349 16 doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]










Genes with expression patterns similar to dmrt1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dmrt1 ENSDARG00000007349 16 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
2. nid2b ENSDARG00000009471 4 2.711 - 1.000 - 0.869 - - 0.842 - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
3. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 2 - 1.000 - - - 1.000 - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
4. mcm5_1 ENSDARG00000019507 10 2 - 1.000 - - - 1.000 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
5. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 2 - 1.000 - - - 1.000 - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
6. si:dkeyp-33e11.1 6 2 - 1.000 - - - 1.000 - - - si:dkeyp-33e11.1, transcript variant X3
7. col8a1b ENSDARG00000003533 18 1.942 - 1.000 - - 0.942 - - - - collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
8. EXD1 ENSDARG00000098669 27 1.941 - 0.941 - - - 1.000 - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
9. fem1a ENSDARG00000067966 11 1.939 - - - - 0.939 1.000 - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
10. CABZ01057951.1 CABZ01057951.1 10 1.932 - 1.000 - - - - - 0.932 -
11. slc1a9 ENSDARG00000098269 12 1.927 - 1.000 - - - - 0.927 - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
12. fbxo36b ENSDARG00000039152 7 1.919 - - - - 0.939 - - - 0.980 F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
13. zgc:165409_1 ENSDARG00000091385 65 1.917 - 1.000 - - - - 0.917 - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
14. PLA2G3 ENSDARG00000008948 23 1.908 - - - - 0.924 - - 0.984 - phospholipase A2 group III [Source:ZFIN;Acc:ZDB-GENE-051113-96]
15. BX004785.2 ENSDARG00000093487 10 1.907 - - - - 0.927 - - - 0.980
16. f13b ENSDARG00000101353 2 1.888 - - 0.888 - - 1.000 - - - coagulation factor XIII, B polypeptide [Source:ZFIN;Acc:ZDB-GENE-050208-701]
17. si:ch211-199m9.2 si:ch211-199m9.2 9 1.888 - 1.000 0.888 - - - - - -
18. LRRK1_1 LRRK1_1 11 1.881 - 1.000 - - 0.881 - - - -
19. NFATC4 ENSDARG00000054162 44 1.873 - 1.000 - - - 0.873 - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
20. cldn15lb ENSDARG00000100844 46 1.859 - - - 0.906 - 0.953 - - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
21. PROC PROC 11 1.842 - - - - - 1.000 0.842 - -
22. CU457778.1 ENSDARG00000098976 38 1.842 - 1.000 - - - - 0.842 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
23. polm ENSDARG00000103470 49 1.842 - - - - - 1.000 0.842 - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
24. HYKK_1 HYKK_1 4 1.842 - 1.000 - - - - 0.842 - -
25. n6amt2 7 1.842 - 1.000 - - - - 0.842 - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
26. si:ch211-120c15.1 si:ch211-120c15.1 20 1.842 - 1.000 - - - - 0.842 - -
27. TNFRSF14_4 TNFRSF14_4 5 1.842 - - - - - - 0.842 1.000 -
28. fermt3a fermt3a 56 1.842 - 1.000 - - - - 0.842 - -
29. AL954676.2 AL954676.2 50 1.833 - 1.000 - 0.833 - - - - -
30. GAS2 18 1.819 - 1.000 - - - - - 0.819 - growth arrest specific 2, transcript variant X1
31. ZNF337_11 ZNF337_11 11 1.809 - 1.000 - - - - - - 0.809
32. tmem79a ENSDARG00000071250 48 1.806 - - - - - 0.952 - - 0.854 transmembrane protein 79a [Source:ZFIN;Acc:ZDB-GENE-060503-538]
33. AL954698.1 ENSDARG00000098202 377 1.78 - - - - - 1.000 0.780 - -
34. gyg2 ENSDARG00000033380 12 1.779 - - 0.793 0.986 - - - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
35. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 1.777 - 1.000 - - - 0.777 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
36. znf512 ENSDARG00000041910 20 1.77 - 0.770 - - - 1.000 - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
37. mettl25 ENSDARG00000045754 36 1.763 - 1.000 - - - - 0.763 - - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
38. dazl ENSDARG00000036214 11 1.761 - - - 0.817 - - 0.944 - - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
39. si:dkey-20d21.12 ENSDARG00000092123 38 1.748 - 1.000 - - 0.748 - - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
40. cdk5r1a ENSDARG00000037916 46 1.746 - 1.000 - - - 0.746 - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
41. ralgapa1 ENSDARG00000076889 36 1.744 - - - - - 1.000 0.744 - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
42. snx24 ENSDARG00000053527 31 1.738 - - - - 0.925 - - - 0.813 sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
43. LYPLAL1 ENSDARG00000088764 87 1.738 - 0.865 - - - - 0.873 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
44. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 81 1.724 - - - - - 0.842 - 0.882 - ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
45. spi1a ENSDARG00000067797 113 1.724 - 0.880 - - - 0.844 - - - Spi-1 proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-060825-351]
46. samsn1a ENSDARG00000054543 28 1.709 - - - - - 0.952 0.757 - - SAM domain, SH3 domain and nuclear localisation signals 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8639]
47. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.705 - - - - - 1.000 0.705 - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
48. CU915778.2 CU915778.2 194 1.702 - 0.880 - - - - 0.822 - -
49. BX927369.1 ENSDARG00000105047 21 1.7 - - 0.812 - - - 0.888 - -
50. zgc:154040 16 1.69 - - - - - - - 0.710 0.980 zgc:154040
51. golga2 ENSDARG00000063197 30 1.667 - 0.794 - - - 0.873 - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
52. esr1 ENSDARG00000004111, ENSDARG00000112357 19 1.657 - - 0.786 - - - 0.871 - - estrogen receptor 1 [Source:ZFIN;Acc:ZDB-GENE-020806-5]
53. scara3 ENSDARG00000008060 169 1.645 - - 0.825 - 0.820 - - - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
54. HTRA4 ENSDARG00000005943 77 1.643 - - - - 0.880 0.763 - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
55. npas2 ENSDARG00000016536, ENSDARG00000116993 35 1.62 - - - - - - 0.842 - 0.778 neuronal PAS domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030408-3]
56. si:dkey-14d8.9 si:dkey-14d8.9 66 1.619 - 0.771 - - - - 0.848 - -
57. piwil2 ENSDARG00000062601 14 1.614 - - - - 0.897 0.717 - - - piwi-like RNA-mediated gene silencing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-345]
58. CT955963.1 ENSDARG00000100370 23 1.603 - 0.794 - 0.809 - - - - -
59. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1.589 - - - 0.713 - - - 0.876 - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
60. nanos3 ENSDARG00000068255 319 1.557 - - - - - 0.768 0.789 - - nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
61. CU856207.1 CU856207.1 87 1.545 - - 0.811 - - - 0.734 - -
62. rasal3 ENSDARG00000089933 17 1.545 - - - - - - 0.763 - 0.782 RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
63. ACOT12 ENSDARG00000054534 61 1.536 - - 0.710 - - - - 0.826 - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
64. ube2r2 ENSDARG00000058740 83 1.531 - 0.710 - - - - - 0.821 - ubiquitin-conjugating enzyme E2R 2 [Source:ZFIN;Acc:ZDB-GENE-040718-344]
65. dnm2a ENSDARG00000069937 32 1.512 - 0.780 - - - 0.732 - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
66. si:dkey-206m15.8 16 1.508 - - - - - - - 0.781 0.727 si:dkey-206m15.8
67. kcnk13a ENSDARG00000008212 136 1.498 - - - 0.788 0.710 - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
68. FAM120A ENSDARG00000075021 73 1.489 - 0.726 - - - - 0.763 - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
69. zgc:174700 zgc:174700 35 1.451 - - - 0.717 - - 0.734 - -
70. elf3 ENSDARG00000077982 211 1.445 - - - - - 0.702 0.743 - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
71. UHRF2_1 UHRF2_1 2 1 - 1.000 - - - - - - -
72. ERAP1 ERAP1 0 1 - 1.000 - - - - - - -
73. F2RL3 ENSDARG00000079399 29 1 - - - - - 1.000 - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
74. msgn1 ENSDARG00000070546 188 1 - 1.000 - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
75. CABZ01079192.1 ENSDARG00000101629 23 1 - 1.000 - - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
76. zgc:152698 32 1 - 1.000 - - - - - - - zgc:152698
77. txlng ENSDARG00000001969 7 1 - - - - - 1.000 - - - taxilin gamma [Source:ZFIN;Acc:ZDB-GENE-060616-122]
78. sc:d136 sc:d136 2 1 - - - - - 1.000 - - -
79. BX682234.1 ENSDARG00000074732 5 1 - - - - - 1.000 - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
80. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
81. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
82. pcbp3 ENSDARG00000054378 74 1 - 1.000 - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
83. lhx5 ENSDARG00000057936 785 1 - 1.000 - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
84. or109-1 ENSDARG00000105796 1 1 - - - 1.000 - - - - - odorant receptor, family D, subfamily 109, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-67]
85. aatkb ENSDARG00000104442 392 1 - 1.000 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
86. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
87. MFAP4_2 MFAP4_2 592 1 - 1.000 - - - - - - -
88. PRR12 PRR12 38 1 - 1.000 - - - - - - -
89. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
90. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - 1.000 - - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
91. actl6b ENSDARG00000034107 9 1 - 1.000 - - - - - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
92. lcp2b ENSDARG00000036215 15 1 - 1.000 - - - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
93. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - 1.000 - - - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
94. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
95. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
96. SRR_1 SRR_1 0 1 - 1.000 - - - - - - -
97. MLLT4 MLLT4 67 1 - 1.000 - - - - - - -
98. slc25a29 ENSDARG00000057352 9 1 - 1.000 - - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
99. GABRA3 ENSDARG00000090883 5 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
100. BX470131.1 BX470131.1 86 1 - 1.000 - - - - - - -

There are 1283 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA