Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cspg4

Gene Name Gene ID Reads Annotation
cspg4 ENSDARG00000078227 1084 chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]










Genes with expression patterns similar to cspg4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cspg4 ENSDARG00000078227 1084 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
2. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.353 - 0.871 - - - 0.862 0.755 - 0.865 ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
3. alpk3a ENSDARG00000078989 1992 3.205 - 0.832 - - - 0.727 0.838 - 0.808 alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
4. jph1a ENSDARG00000058603 2852 2.46 - 0.853 - - - 0.788 0.819 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
5. txlnbb ENSDARG00000076241 6396 2.458 - 0.861 - - - 0.845 0.752 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
6. mlf1 ENSDARG00000077301 789 2.433 - 0.840 - - - 0.787 0.806 - - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
7. DNAJA4 ENSDARG00000051762 5657 2.424 - 0.837 - - - 0.781 0.806 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
8. sh3bgr ENSDARG00000021633 3498 2.422 - 0.888 - - - 0.745 0.789 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
9. klhl40a ENSDARG00000039052 2537 2.415 - 0.858 - - - 0.767 0.790 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
10. zgc:158296 ENSDARG00000070923 3935 2.411 - 0.815 - - - 0.848 0.748 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
11. sptb ENSDARG00000030490 7128 2.405 - 0.806 - - - 0.831 0.768 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
12. fitm1 ENSDARG00000056464 1759 2.403 - 0.838 - - - 0.741 0.824 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
13. ryr3 ENSDARG00000071331 6795 2.398 - 0.778 - - - 0.838 0.782 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
14. tnnc1b ENSDARG00000037539 13945 2.361 - 0.819 - - - 0.770 0.772 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
15. arvcfb ENSDARG00000061688 2388 2.343 - 0.805 - - - - 0.735 - 0.803 ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
16. EHBP1L1 EHBP1L1 2500 2.341 - 0.815 - - - 0.775 0.751 - -
17. PTPLA PTPLA 4044 2.325 - 0.812 - - - 0.763 0.750 - -
18. mef2aa ENSDARG00000031756 2699 2.324 - 0.859 - - - 0.754 0.711 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
19. CR450814.3 CR450814.3 608 2.321 - 0.792 - - - 0.759 0.770 - -
20. enah ENSDARG00000032049 1526 2.315 - 0.790 - - - 0.724 0.801 - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
21. six1a ENSDARG00000039304 1183 2.301 0.720 0.836 - - - 0.745 - - - SIX homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040718-155]
22. MUSTN1 MUSTN1 1882 2.294 - 0.701 - - - 0.826 0.767 - -
23. kcnma1a ENSDARG00000079840 2584 2.29 - 0.781 - - - 0.786 0.723 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
24. MYOT ENSDARG00000076312 1791 2.282 - 0.757 - - - 0.759 0.766 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
25. limch1a ENSDARG00000074275 2981 2.279 - 0.777 - - - 0.715 0.787 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
26. asb2a asb2a 845 2.269 - 0.824 - - - 0.729 0.716 - -
27. trdn ENSDARG00000041779 4283 2.268 - 0.747 - - - 0.762 0.759 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
28. cct8 ENSDARG00000008243 6843 2.268 - 0.770 - - - 0.738 0.760 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
29. klhl21 ENSDARG00000039255 2550 2.266 - 0.804 - - - 0.721 0.741 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
30. chrne ENSDARG00000034307, ENSDARG00000112263 1022 2.247 - - - - - 0.726 0.817 0.704 - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
31. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 2.242 - 0.800 - - - 0.731 0.711 - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
32. txnipb ENSDARG00000070000 2365 2.231 - 0.711 - - - 0.777 0.743 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
33. stac3 ENSDARG00000098883 1765 2.224 - 0.761 - - - 0.727 0.736 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
34. hsc70 ENSDARG00000012381 961 2.219 - - 0.753 - - 0.734 0.732 - - heat shock cognate 70 [Source:ZFIN;Acc:ZDB-GENE-040426-1221]
35. mef2d ENSDARG00000040237 6144 2.196 - 0.781 - - - 0.713 - 0.702 - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
36. myoz2a ENSDARG00000012311 1373 2.174 - 0.737 - - - 0.709 0.728 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
37. rai14 ENSDARG00000039974, ENSDARG00000111103 916 2.156 0.730 0.700 - - - - 0.726 - - retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
38. plod2 ENSDARG00000011821 1656 2.137 - 0.715 - - - 0.705 0.717 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
39. rp42-pen rp42-pen 3395 1.722 - 0.878 - - - 0.844 - - -
40. polr3a ENSDARG00000102569 1072 1.721 - 0.882 - - - - - - 0.839 polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
41. TRIM63 TRIM63 1600 1.718 - 0.887 - - - - 0.831 - -
42. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.713 - 0.889 - - - - - - 0.824 GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
43. chrna1 ENSDARG00000009021 2931 1.691 - 0.844 - - - - 0.847 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
44. PTGES3L PTGES3L 4801 1.651 - - - - - 0.846 0.805 - -
45. sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 1.65 - 0.780 - - - - - - 0.870 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]
46. TENC1 TENC1 1729 1.647 - 0.889 - - - - 0.758 - -
47. CR392006.1 CR392006.1 1401 1.646 - 0.809 - - - 0.837 - - -
48. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.64 - - - - - 0.869 0.771 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
49. zgc:113184 ENSDARG00000098181 500 1.627 - - 0.779 - - - - - 0.848 zgc:113184 [Source:ZFIN;Acc:ZDB-GENE-050522-9]
50. ugp2a ENSDARG00000005578 2835 1.627 - - - - - 0.852 0.775 - - UDP-glucose pyrophosphorylase 2a [Source:ZFIN;Acc:ZDB-GENE-090311-46]
51. ntmt1 ENSDARG00000022399 5779 1.625 - 0.865 - - - - 0.760 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
52. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.624 - 0.849 - - - - 0.775 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
53. chrnd ENSDARG00000019342 2728 1.621 - 0.843 - - - - 0.778 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
54. ryr1b ENSDARG00000023797 5693 1.621 - 0.860 - - - - 0.761 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
55. MRPS17 ENSDARG00000054164 971 1.617 - 0.819 - - - 0.798 - - - mitochondrial ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-050522-390]
56. ndufb3 ENSDARG00000075709 6609 1.617 - - - - - 0.830 0.787 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]
57. pbxip1a ENSDARG00000071015 4960 1.613 - 0.854 - - - - 0.759 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
58. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.613 - 0.846 - - - - 0.767 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
59. gpr1 ENSDARG00000101366 733 1.606 - 0.767 - - - - - - 0.839 G protein-coupled receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091204-457]
60. mybphb ENSDARG00000003081 5208 1.605 - 0.865 - - - - 0.740 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
61. ALDH1L2 ENSDARG00000070230 2550 1.604 - - 0.860 - - - 0.744 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
62. slc25a21 ENSDARG00000060564 344 1.604 - - 0.824 - - - 0.780 - - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
63. tgm1l1 ENSDARG00000102106 1437 1.602 - 0.878 - - - - 0.724 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
64. rnf175 ENSDARG00000037647 1233 1.6 - - - - - 0.795 - - 0.805 ring finger protein 175 [Source:ZFIN;Acc:ZDB-GENE-040426-1104]
65. gypc ENSDARG00000041546 1487 1.599 - 0.840 - - - - 0.759 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
66. cd248b ENSDARG00000077938 2561 1.598 - 0.831 - - - - 0.767 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
67. rbm24a ENSDARG00000102995 5123 1.596 - - - - - 0.821 0.775 - - RNA binding motif protein 24a [Source:ZFIN;Acc:ZDB-GENE-040628-1]
68. slc25a12 ENSDARG00000102362 2773 1.594 - - - - - - 0.837 - 0.757 solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
69. nt5dc3 ENSDARG00000062949 816 1.589 - 0.776 - - - - - - 0.813 5'-nucleotidase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080523-3]
70. cacng1 cacng1 3118 1.586 - 0.829 - - - - 0.757 - -
71. hhatla ENSDARG00000039051 6598 1.585 - 0.821 - - - - 0.764 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
72. DHRS7C DHRS7C 363 1.583 - 0.853 - - - - - 0.730 -
73. c1qtnf6a ENSDARG00000055175 335 1.583 - 0.738 - - - - 0.845 - - C1q and TNF related 6a [Source:ZFIN;Acc:ZDB-GENE-080108-3]
74. smyd2b ENSDARG00000005629 8181 1.582 - 0.778 - - - 0.804 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
75. atrip ENSDARG00000063076 385 1.581 - 0.757 - - - - - - 0.824 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
76. BX294434.1 ENSDARG00000061272 6493 1.58 - 0.774 - - - - 0.806 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
77. timm8b ENSDARG00000055708 7291 1.58 - 0.824 - - - - 0.756 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
78. C3H19orf52 C3H19orf52 541 1.579 - 0.846 - - - - - 0.733 -
79. smarcd3a ENSDARG00000038786 2894 1.577 - 0.786 - - - 0.791 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
80. asb5b ENSDARG00000053222 1207 1.577 - 0.868 - - - 0.709 - - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
81. arpp21 ENSDARG00000061081 892 1.576 - 0.802 - - - - 0.774 - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
82. znf106a ENSDARG00000016651 6049 1.576 - 0.843 - - - - 0.733 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
83. hapln1a ENSDARG00000089769 12334 1.574 - 0.776 - - - - 0.798 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
84. zgc:92518 ENSDARG00000016343 3837 1.574 - - - - - 0.783 0.791 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
85. srl ENSDARG00000104587 11126 1.573 - 0.833 - - - - 0.740 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
86. eef2k ENSDARG00000035835 2906 1.573 - 0.803 - - - - 0.770 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
87. TRIM67 ENSDARG00000108787 290 1.572 - 0.864 - - - - - 0.708 - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
88. kirrelb 383 1.571 - 0.810 - - - - - 0.761 - kin of IRRE like b, transcript variant X3
89. serpinf1 ENSDARG00000069048 2083 1.571 - 0.783 - - - - 0.788 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
90. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.57 - 0.857 - - - - 0.713 - -
91. tbx18 ENSDARG00000036930 390 1.566 - 0.736 - - - - - - 0.830 T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
92. smtnl1 ENSDARG00000041257 7410 1.565 - - - - - 0.761 0.804 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
93. fam173b ENSDARG00000033451 513 1.565 - - 0.827 - - - 0.738 - - family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
94. eya4 ENSDARG00000012397, ENSDARG00000117039 887 1.564 - - - - - 0.763 0.801 - - EYA transcriptional coactivator and phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-050327-93]
95. pcmt ENSDARG00000015201 5132 1.562 - 0.793 - - - - 0.769 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
96. six1b ENSDARG00000026473 1908 1.561 - 0.833 - - - - 0.728 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
97. mdh1b ENSDARG00000018008 3196 1.56 - - - - - 0.762 0.798 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
98. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 1.559 - 0.844 - - - - 0.715 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
99. flncb ENSDARG00000018820 5595 1.556 - - - - - 0.734 0.822 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
100. CU633479.5 ENSDARG00000114818 1815 1.556 - 0.777 - - - - 0.779 - -

There are 1556 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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