Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cs

Gene Name Gene ID Reads Annotation
cs ENSDARG00000103364 833 citrate synthase [Source:ZFIN;Acc:ZDB-GENE-030131-1058]










Genes with expression patterns similar to cs

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cs ENSDARG00000103364 833 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 citrate synthase [Source:ZFIN;Acc:ZDB-GENE-030131-1058]
2. hiat1b ENSDARG00000043055 757 1.681 - 0.871 - - - 0.810 - - - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
3. apln ENSDARG00000053279 858 1.661 - 0.871 - - - 0.790 - - - apelin [Source:ZFIN;Acc:ZDB-GENE-070521-8]
4. ireb2 ENSDARG00000021466 699 1.659 - - - - - 0.876 0.783 - - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
5. zic3 ENSDARG00000071497 1448 1.659 - 0.843 - - - 0.816 - - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
6. BX664721.5 BX664721.5 462 1.657 - 0.793 - - - 0.864 - - -
7. glipr2l ENSDARG00000016837 440 1.636 - 0.794 - - - 0.842 - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
8. MON2 ENSDARG00000099798 2359 1.623 - 0.715 - - - 0.908 - - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
9. slc6a1b ENSDARG00000039647 1301 1.61 - 0.813 - - - 0.797 - - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
10. GSG2 GSG2 1162 1.6 - 0.838 - - - 0.762 - - -
11. dscr3 1229 1.599 - 0.762 - - - - 0.837 - - Down syndrome critical region 3
12. cep19 ENSDARG00000059175 266 1.598 - - - - - 0.817 0.781 - - centrosomal protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-81]
13. DBF4B ENSDARG00000086550 374 1.598 - 0.752 - - - 0.846 - - - DBF4 zinc finger B [Source:ZFIN;Acc:ZDB-GENE-121214-269]
14. lpar2a ENSDARG00000042338 285 1.592 - 0.855 - - - 0.737 - - - lysophosphatidic acid receptor 2a [Source:ZFIN;Acc:ZDB-GENE-040801-97]
15. fgfr1op2 ENSDARG00000009657 904 1.574 - 0.865 - - - 0.709 - - - FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
16. pid1 ENSDARG00000098984, ENSDARG00000114639 1252 1.572 - 0.853 - - - 0.719 - - - phosphotyrosine interaction domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-72]
17. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 1.57 - 0.836 - - - - 0.734 - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
18. AL954372.1 ENSDARG00000112499 589 1.57 0.735 - - - - 0.835 - - -
19. cacna1sa ENSDARG00000029457 883 1.565 - 0.823 - - - 0.742 - - - calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]
20. chmp3 ENSDARG00000038064 577 1.564 - 0.769 - - - 0.795 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
21. NCBP1 585 1.54 0.747 - - - - 0.793 - - - nuclear cap binding protein subunit 1
22. MSL1_1 MSL1_1 2365 1.54 - 0.713 - - - 0.827 - - -
23. st8sia4 ENSDARG00000103600 198 1.539 0.720 0.819 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-10]
24. CAMK2G CAMK2G 3537 1.537 0.746 - - - - 0.791 - - -
25. CXXC5 CXXC5 1332 1.532 - 0.760 - - - 0.772 - - -
26. mfsd2ab ENSDARG00000035909, ENSDARG00000114714 1520 1.53 - 0.712 - - - 0.818 - - - major facilitator superfamily domain containing 2ab [Source:NCBI gene;Acc:445176]
27. pom121 ENSDARG00000055113 1063 1.525 - 0.819 - - - 0.706 - - - POM121 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-6557]
28. mob1ba ENSDARG00000009169 1019 1.494 - 0.758 - - - 0.736 - - - MOB kinase activator 1Ba [Source:ZFIN;Acc:ZDB-GENE-040426-919]
29. cxadr ENSDARG00000043658, ENSDARG00000110210, ENSDARG00000111984 451 1.489 - 0.733 - - - 0.756 - - - CXADR, Ig-like cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-020814-2]
30. psmc5 ENSDARG00000015315 8458 1.478 - 0.730 - - - - 0.748 - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
31. RBM22 ENSDARG00000010238 493 1.476 - 0.764 - - - - 0.712 - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
32. cd2bp2 ENSDARG00000027357, ENSDARG00000115040, ENSDARG00000115297 1808 1.474 0.730 0.744 - - - - - - - CD2 (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-925]
33. myoc ENSDARG00000021789 1631 1.474 - - - - - 0.708 0.766 - - myocilin [Source:ZFIN;Acc:ZDB-GENE-050425-2]
34. stard8 ENSDARG00000014003, ENSDARG00000114410 1237 1.467 - 0.711 - - - - 0.756 - - StAR-related lipid transfer (START) domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-9447]
35. CABZ01038494.1 ENSDARG00000088258 908 1.455 - 0.729 - - - 0.726 - - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
36. TEX264 TEX264 283 1.454 - 0.710 - - - 0.744 - - -
37. pnoca ENSDARG00000025024 467 1.453 - 0.727 - - - 0.726 - - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
38. htatsf1 ENSDARG00000056649 2018 1.428 - - - - - 0.725 0.703 - - HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
39. tcta ENSDARG00000044194 1183 1.427 - 0.725 - - - 0.702 - - - T cell leukemia translocation altered [Source:ZFIN;Acc:ZDB-GENE-040718-325]
40. ptpn9b ENSDARG00000073902 755 0.931 - - - - - 0.931 - - - protein tyrosine phosphatase, non-receptor type 9, b [Source:ZFIN;Acc:ZDB-GENE-090313-52]
41. glmna ENSDARG00000058267 597 0.92 - - - - - 0.920 - - - glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
42. nradd ENSDARG00000057143 1159 0.917 - - - - - 0.917 - - - neurotrophin receptor associated death domain [Source:ZFIN;Acc:ZDB-GENE-030131-2537]
43. dnajc7_1 ENSDARG00000058148 687 0.912 - 0.912 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2483]
44. dpp3 ENSDARG00000020676 2393 0.911 - 0.911 - - - - - - - dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
45. fam96b 2255 0.905 - - - - - 0.905 - - - family with sequence similarity 96, member B
46. asb2b ENSDARG00000102490 311 0.902 - 0.902 - - - - - - - ankyrin repeat and SOCS box containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-20]
47. CABZ01100187.1 CABZ01100187.1 191 0.899 - - - - - 0.899 - - -
48. asun 483 0.896 - - - - - 0.896 - - - asunder, spermatogenesis regulator homolog (Drosphila), transcript variant X1
49. si:ch211-262h13.3 ENSDARG00000070898 2094 0.895 - - - - - 0.895 - - - si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
50. si:ch211-194k22.8 ENSDARG00000096711 1318 0.895 - - - - - 0.895 - - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
51. ptrfb ptrfb 567 0.893 - - - - - 0.893 - - -
52. ndufaf6 ENSDARG00000053652 351 0.892 - 0.892 - - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:ZFIN;Acc:ZDB-GENE-100112-1]
53. grasp ENSDARG00000000588, ENSDARG00000113330 766 0.891 - - - - - 0.891 - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
54. GPR156 ENSDARG00000086215 126 0.89 - - - - - 0.890 - - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
55. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 0.886 - - - - - 0.886 - - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
56. TMEM97 ENSDARG00000040553 530 0.885 - 0.885 - - - - - - - transmembrane protein 97 [Source:ZFIN;Acc:ZDB-GENE-110627-1]
57. WIZ_1 WIZ_1 378 0.885 - 0.885 - - - - - - -
58. OXR1 OXR1 378 0.883 - 0.883 - - - - - - -
59. btbd2 btbd2 1296 0.883 - 0.883 - - - - - - -
60. eif2b4 ENSDARG00000014004 2213 0.881 - 0.881 - - - - - - - eukaryotic translation initiation factor 2B, subunit 4 delta [Source:ZFIN;Acc:ZDB-GENE-030131-955]
61. AL840631.2 AL840631.2 326 0.88 - 0.880 - - - - - - -
62. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.879 - - - - - 0.879 - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
63. cx34.4 ENSDARG00000075854 168 0.879 - - - - - 0.879 - - - connexin 34.4 [Source:ZFIN;Acc:ZDB-GENE-040406-3]
64. lmx1ba ENSDARG00000104815 376 0.878 - - - - - 0.878 - - - LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
65. wdr43 ENSDARG00000077264 1992 0.878 - - - - - 0.878 - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
66. si:ch211-220f16.2 ENSDARG00000007976 638 0.878 - - - - - 0.878 - - - si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]
67. mafg2 mafg2 1041 0.876 - - - - - 0.876 - - -
68. pknox2 ENSDARG00000055349 784 0.875 - - - - - 0.875 - - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
69. zgc:77056 ENSDARG00000029615 297 0.875 - 0.875 - - - - - - - zgc:77056 [Source:ZFIN;Acc:ZDB-GENE-030131-5248]
70. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 0.874 - 0.874 - - - - - - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
71. znf592 ENSDARG00000060885 776 0.874 - - - - - 0.874 - - - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
72. il6st ENSDARG00000104693 55 0.873 - 0.873 - - - - - - - interleukin 6 signal transducer [Source:ZFIN;Acc:ZDB-GENE-080104-6]
73. kmt2ba ENSDARG00000062962 1572 0.873 - 0.873 - - - - - - - lysine (K)-specific methyltransferase 2Ba [Source:ZFIN;Acc:ZDB-GENE-060503-376]
74. BX088524.2 ENSDARG00000103268 564 0.871 - - - - - 0.871 - - -
75. MAD2L2_1 MAD2L2_1 705 0.871 - 0.871 - - - - - - -
76. kirrel3l ENSDARG00000104665 499 0.87 - 0.870 - - - - - - - kirre like nephrin family adhesion molecule 3, like [Source:ZFIN;Acc:ZDB-GENE-070831-1]
77. spred1 ENSDARG00000041449, ENSDARG00000117025 1124 0.869 - - - - - 0.869 - - - sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]
78. C19H1orf109 ENSDARG00000012113 398 0.869 - 0.869 - - - - - - - c19h1orf109 homolog (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-021219-1]
79. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 0.869 - - - - - 0.869 - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
80. ryk ENSDARG00000007231 1611 0.869 - - - - - 0.869 - - - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
81. si:dkey-45d16.4 72 0.868 - - - - - 0.868 - - - si:dkey-45d16.4
82. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 0.868 - - - - - 0.868 - - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
83. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.868 - - - - - 0.868 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
84. sas sas 1783 0.868 - - - - - 0.868 - - -
85. DSCAML1 ENSDARG00000098057 321 0.867 - - - - - 0.867 - - - Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
86. tbcela ENSDARG00000002682 1179 0.867 - - - - - 0.867 - - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
87. gnav1 ENSDARG00000043006 305 0.867 - - - - - 0.867 - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
88. DLK1 60 0.866 - - - - - 0.866 - - - delta like non-canonical Notch ligand 1
89. aldh2.2_1 ENSDARG00000028087 279 0.866 - 0.866 - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
90. slc46a1 ENSDARG00000026149 297 0.866 - - - - - 0.866 - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
91. MRPL2 ENSDARG00000062568 407 0.865 - 0.865 - - - - - - - mitochondrial ribosomal protein L2 [Source:ZFIN;Acc:ZDB-GENE-050809-12]
92. chst10 ENSDARG00000031632 461 0.865 - - - - - 0.865 - - - carbohydrate sulfotransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040808-40]
93. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 0.864 - - - - - 0.864 - - - mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
94. CABZ01064447.1 CABZ01064447.1 348 0.864 - 0.864 - - - - - - -
95. vps45 ENSDARG00000061180 791 0.864 - 0.864 - - - - - - - vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-526]
96. ZNF740 ZNF740 676 0.863 - 0.863 - - - - - - -
97. FAM126B 588 0.863 - - - - - 0.863 - - - family with sequence similarity 126 member B
98. NUDT8 ENSDARG00000007722 329 0.863 - - - - - 0.863 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
99. tnc ENSDARG00000021948, ENSDARG00000113518 12162 0.863 - - - - - 0.863 - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
100. nrp1b ENSDARG00000027290 170 0.862 - - - - - 0.862 - - - neuropilin 1b [Source:ZFIN;Acc:ZDB-GENE-040611-1]

There are 1363 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA