Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cpne3

Gene Name Gene ID Reads Annotation
cpne3 ENSDARG00000104177, ENSDARG00000109906, ENSDARG00000110868 1084 copine III [Source:ZFIN;Acc:ZDB-GENE-040426-763]










Genes with expression patterns similar to cpne3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cpne3 ENSDARG00000104177, ENSDARG00000109906, ENSDARG00000110868 1084 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 copine III [Source:ZFIN;Acc:ZDB-GENE-040426-763]
2. GTSF1L GTSF1L 2089 2.595 - 0.848 - - - 0.756 - - 0.991
3. tlcd2 ENSDARG00000077396 2122 2.292 0.718 0.763 - - - 0.811 - - - TLC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080204-81]
4. si:dkey-118j18.2 ENSDARG00000096457 5293 1.87 - 0.885 - - - - - - 0.985 si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
5. slc38a2 ENSDARG00000045886 2052 1.794 - 0.821 - - - - - - 0.973 solute carrier family 38, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9659]
6. glmna ENSDARG00000058267 597 1.782 - 0.790 - - - - - - 0.992 glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
7. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.746 - - - - - - 0.765 - 0.981 glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
8. aldh4a1 ENSDARG00000038207 4639 1.745 - - - - - 0.802 - - 0.943 aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
9. hoxc11b ENSDARG00000102631 808 1.704 - - - - - 0.734 - - 0.970 homeobox C11b [Source:ZFIN;Acc:ZDB-GENE-000822-3]
10. wnt7aa ENSDARG00000044827 645 1.703 - - - - - 0.718 - - 0.985 wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
11. sp3a ENSDARG00000001549 1994 1.697 - 0.722 - - - - - - 0.975 sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
12. elovl1b ENSDARG00000103735 2783 1.695 - 0.731 - - - - - - 0.964 ELOVL fatty acid elongase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2755]
13. mbd1 mbd1 1309 1.691 - 0.762 - - - - - - 0.929
14. lgals3l lgals3l 3833 1.679 0.759 - - - - - - - 0.920
15. magt1 ENSDARG00000058062 3903 1.674 - - - - - - 0.702 - 0.972 magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
16. cited4a ENSDARG00000035990 2762 1.67 - 0.712 - - - - - - 0.958 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a [Source:ZFIN;Acc:ZDB-GENE-030131-7661]
17. isca1 ENSDARG00000051956 5855 1.659 - - - - - 0.775 - - 0.884 iron-sulfur cluster assembly 1 [Source:ZFIN;Acc:ZDB-GENE-050626-94]
18. mapk3 ENSDARG00000070573 6842 1.657 - 0.807 - - - - - - 0.850 mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
19. GOLPH3 ENSDARG00000052851, ENSDARG00000109334 3117 1.653 - - - - - - 0.709 - 0.944 golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
20. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 1.628 - 0.723 - - - - - - 0.905 integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
21. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.624 - - - - - 0.726 - - 0.898 ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
22. ncdn ENSDARG00000098544 267 1.6 0.848 - - - - - 0.752 - - neurochondrin [Source:ZFIN;Acc:ZDB-GENE-061220-6]
23. prp19 prp19 4804 1.58 - - - - - - 0.703 - 0.877
24. tmx4 ENSDARG00000101512 1379 1.557 0.755 0.802 - - - - - - - thioredoxin-related transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050706-155]
25. usp9 ENSDARG00000013708 9057 1.55 - - - - - 0.738 - - 0.812 ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
26. EML4_1 EML4_1 8736 1.543 - 0.753 - - - - - - 0.790
27. arhgap5 ENSDARG00000061294 2228 1.524 - 0.756 - - - - 0.768 - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
28. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1.523 - 0.748 - - - 0.775 - - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
29. si:ch73-269m23.4 253 1.513 0.701 - - - - 0.812 - - - si:ch73-269m23.4
30. flii ENSDARG00000059701 2290 1.512 - - - - - - 0.711 - 0.801 flightless I actin binding protein [Source:ZFIN;Acc:ZDB-GENE-071212-3]
31. letm2 ENSDARG00000077515 9561 1.51 - 0.734 - - - 0.776 - - - leucine zipper-EF-hand containing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-090521-4]
32. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.506 - 0.720 - - - 0.786 - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
33. slc35e3 ENSDARG00000045493, ENSDARG00000114987 1110 1.494 - - - - - 0.771 - 0.723 - solute carrier family 35, member E3 [Source:ZFIN;Acc:ZDB-GENE-041210-186]
34. col6a2 ENSDARG00000061436 5063 1.486 - 0.750 - - - - 0.736 - - collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
35. anln ENSDARG00000060917 1432 1.486 - - - - - 0.758 0.728 - - anillin, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4486]
36. cfh ENSDARG00000100442, ENSDARG00000109660 2043 1.479 - 0.740 - - - 0.739 - - - complement factor H [Source:ZFIN;Acc:ZDB-GENE-050208-661]
37. lect2l ENSDARG00000033227 482 1.471 - 0.707 - - - 0.764 - - - leukocyte cell-derived chemotaxin 2 like [Source:ZFIN;Acc:ZDB-GENE-070127-4]
38. trim71 ENSDARG00000075593 2750 1.463 - 0.751 - - - 0.712 - - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
39. plekha8 ENSDARG00000040698 431 1.46 - - - - - 0.755 0.705 - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 [Source:ZFIN;Acc:ZDB-GENE-041114-69]
40. dazap2 ENSDARG00000007867 1805 1.456 - 0.727 - - - - 0.729 - - DAZ associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3036]
41. lamb1a ENSDARG00000101209 5396 1.454 - - - - - 0.729 - - 0.725 laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
42. grnb ENSDARG00000025081 716 1.452 - 0.704 - - - 0.748 - - - granulin b [Source:ZFIN;Acc:ZDB-GENE-030131-7393]
43. arhgef7b ENSDARG00000073848 1249 1.445 - 0.706 - - - 0.739 - - - Rho guanine nucleotide exchange factor (GEF) 7b [Source:ZFIN;Acc:ZDB-GENE-041212-49]
44. FAR2 FAR2 1459 1.405 0.705 0.700 - - - - - - -
45. tmem176l.4 ENSDARG00000074390 1886 0.994 - - - - - - - - 0.994 transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
46. MAN2B2 ENSDARG00000079463 316 0.994 - - - - - - - - 0.994 mannosidase, alpha, class 2B, member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-166]
47. wipi2 ENSDARG00000037871 425 0.994 - - - - - - - - 0.994 WD repeat domain, phosphoinositide interacting 2 [Source:ZFIN;Acc:ZDB-GENE-040718-488]
48. ZNF337_3 ZNF337_3 561 0.994 - - - - - - - - 0.994
49. abcg4b ENSDARG00000078068 180 0.994 - - - - - - - - 0.994 ATP-binding cassette, sub-family G (WHITE), member 4b [Source:ZFIN;Acc:ZDB-GENE-080215-10]
50. paip1 ENSDARG00000042892 902 0.994 - - - - - - - - 0.994 poly(A) binding protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-247]
51. wu:fd44f01 wu:fd44f01 391 0.994 - - - - - - - - 0.994
52. foxo1a ENSDARG00000099555 288 0.994 - - - - - - - - 0.994 forkhead box O1 a [Source:ZFIN;Acc:ZDB-GENE-061013-59]
53. arfgef2 ENSDARG00000074702 1593 0.993 - - - - - - - - 0.993 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
54. vox ENSDARG00000099761 801 0.993 - - - - - - - - 0.993 ventral homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-1]
55. zdhhc4 ENSDARG00000045159, ENSDARG00000117124 625 0.993 - - - - - - - - 0.993 zinc finger, DHHC-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9031]
56. jhdm1da jhdm1da 512 0.993 - - - - - - - - 0.993
57. HNRNPH3 ENSDARG00000039466, ENSDARG00000113164, ENSDARG00000114248 551 0.993 - - - - - - - - 0.993 heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878]
58. ift52 ENSDARG00000045025 606 0.993 - - - - - - - - 0.993 intraflagellar transport 52 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-3]
59. baiap2a ENSDARG00000062799 231 0.993 - - - - - - - - 0.993 BAI1-associated protein 2a [Source:ZFIN;Acc:ZDB-GENE-060421-2756]
60. met ENSDARG00000070903 2088 0.993 - - - - - - - - 0.993 MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
61. thrb ENSDARG00000021163 262 0.993 - - - - - - - - 0.993 thyroid hormone receptor beta [Source:ZFIN;Acc:ZDB-GENE-990415-268]
62. nsun4 ENSDARG00000021324 482 0.993 - - - - - - - - 0.993 NOL1/NOP2/Sun domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-041212-77]
63. SNORD88 SNORD88 232 0.992 - - - - - - - - 0.992
64. krt1-c5 ENSDARG00000026979 325 0.992 - - - - - - - - 0.992 keratin, type 1, gene c5 [Source:ZFIN;Acc:ZDB-GENE-060316-3]
65. GPR89A ENSDARG00000077983 463 0.992 - - - - - - - - 0.992 G protein-coupled receptor 89A [Source:HGNC Symbol;Acc:HGNC:31984]
66. CITED1 ENSDARG00000077769 692 0.992 - - - - - - - - 0.992 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5596]
67. tpte ENSDARG00000056985 724 0.992 - - - - - - - - 0.992 transmembrane phosphatase with tensin homology [Source:ZFIN;Acc:ZDB-GENE-030131-5503]
68. mgat3 mgat3 195 0.992 - - - - - - - - 0.992
69. kdelr3 ENSDARG00000040912 556 0.992 - - - - - - - - 0.992 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1387]
70. FAM110D FAM110D 3632 0.992 - - - - - - - - 0.992
71. dlat ENSDARG00000015918 657 0.991 - - - - - - - - 0.991 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) [Source:ZFIN;Acc:ZDB-GENE-030131-2921]
72. plat ENSDARG00000062707 491 0.991 - - - - - - - - 0.991 plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
73. FP236513.2 FP236513.2 443 0.991 - - - - - - - - 0.991
74. CR391963.1 ENSDARG00000096833 518 0.991 - - - - - - - - 0.991
75. ube2z ENSDARG00000029215 1059 0.99 - - - - - - - - 0.990 ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
76. gli3 ENSDARG00000052131 986 0.99 - - - - - - - - 0.990 GLI family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-041111-162]
77. si:busm1-57f23.1 ENSDARG00000074425 418 0.99 - - - - - - - - 0.990 si:busm1-57f23.1 [Source:ZFIN;Acc:ZDB-GENE-030616-512]
78. si:dkey-219c3.2 ENSDARG00000075805 619 0.99 - - - - - - - - 0.990 si:dkey-219c3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-238]
79. elovl6 ENSDARG00000004402, ENSDARG00000114205 2286 0.99 - - - - - - - - 0.990 ELOVL fatty acid elongase 6 [Source:ZFIN;Acc:ZDB-GENE-030114-1]
80. EHBP1 ENSDARG00000043643 966 0.99 - - - - - - - - 0.990 EH domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091006-4]
81. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 0.99 - - - - - - - - 0.990 peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
82. adamts9 ENSDARG00000077778 419 0.99 - - - - - - - - 0.990 ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]
83. s100z ENSDARG00000038729 442 0.99 - - - - - - - - 0.990 S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
84. CT574587.1 ENSDARG00000097915 383 0.989 - - - - - - - - 0.989
85. sertad2b ENSDARG00000055530 785 0.989 - - - - - - - - 0.989 SERTA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030616-569]
86. MICAL2 MICAL2 396 0.989 - - - - - - - - 0.989
87. insra ENSDARG00000011948 1258 0.989 - - - - - - - - 0.989 insulin receptor a [Source:ZFIN;Acc:ZDB-GENE-020503-3]
88. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.989 - - - - - - - - 0.989 catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
89. tchp ENSDARG00000035605 1695 0.989 - - - - - - - - 0.989 trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
90. rint1 ENSDARG00000005547 898 0.989 - - - - - - - - 0.989 RAD50 interactor 1 [Source:ZFIN;Acc:ZDB-GENE-041210-174]
91. si:dkey-119m17.2 509 0.988 - - - - - - - - 0.988 si:dkey-119m17.2, transcript variant X2
92. twf1a ENSDARG00000115712 3465 0.987 - - - - - - - - 0.987 twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
93. map3k3 ENSDARG00000060348 1482 0.987 - - - - - - - - 0.987 mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
94. hyal2 hyal2 2205 0.987 - - - - - - - - 0.987
95. lrrtm1 ENSDARG00000052713 1041 0.987 - - - - - - - - 0.987 leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
96. bcar3 ENSDARG00000016981 714 0.987 - - - - - - - - 0.987 BCAR3, NSP family adaptor protein [Source:ZFIN;Acc:ZDB-GENE-080513-4]
97. tmem51a ENSDARG00000068575, ENSDARG00000114656 596 0.987 - - - - - - - - 0.987 transmembrane protein 51a [Source:ZFIN;Acc:ZDB-GENE-061103-481]
98. nrip2 ENSDARG00000079985 505 0.986 - - - - - - - - 0.986 nuclear receptor interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9425]
99. ndc1 ENSDARG00000021120 2417 0.986 - - - - - - - - 0.986 NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
100. arhgef25b ENSDARG00000014465 669 0.986 - - - - - - - - 0.986 Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]

There are 938 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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