Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cops4

Gene Name Gene ID Reads Annotation
cops4 ENSDARG00000043732 1508 COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]










Genes with expression patterns similar to cops4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cops4 ENSDARG00000043732 1508 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
2. myo1b ENSDARG00000024694 1761 2.463 - 0.763 0.963 - - - 0.737 - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
3. zgc:112982 ENSDARG00000001829, ENSDARG00000110590, ENSDARG00000111057 2330 1.886 - 0.916 0.970 - - - - - - zgc:112982 [Source:ZFIN;Acc:ZDB-GENE-050306-55]
4. elmod2 ENSDARG00000101669 3101 1.828 - 0.879 0.949 - - - - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
5. zgc:66472 ENSDARG00000075916 635 1.816 - 0.843 0.973 - - - - - - zgc:66472 [Source:ZFIN;Acc:ZDB-GENE-030131-5705]
6. arhgap12b ENSDARG00000026482, ENSDARG00000109973 1142 1.8 - 0.826 0.974 - - - - - - Rho GTPase activating protein 12b [Source:ZFIN;Acc:ZDB-GENE-040426-1727]
7. tmem231 ENSDARG00000042272 557 1.784 - 0.812 0.972 - - - - - - transmembrane protein 231 [Source:ZFIN;Acc:ZDB-GENE-040426-1386]
8. znf207a ENSDARG00000015538 2630 1.777 - 0.815 0.962 - - - - - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
9. rfc1 ENSDARG00000054799 1416 1.751 - - 0.954 - - - 0.797 - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
10. gtf2a1 ENSDARG00000011000 2026 1.742 - 0.846 0.896 - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
11. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.732 - - 0.972 - - 0.760 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
12. prr12a ENSDARG00000074229 1668 1.731 - - 0.979 - - - 0.752 - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
13. srsf5b ENSDARG00000027734 6996 1.726 - - 0.982 - - 0.744 - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
14. gtf2f1 ENSDARG00000032129 3041 1.704 0.773 - 0.931 - - - - - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
15. nin ENSDARG00000060298 1558 1.699 - - 0.965 - - 0.734 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
16. srsf1b ENSDARG00000017843 2760 1.694 - - 0.954 - 0.740 - - - - serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
17. znf292b ENSDARG00000043973 3791 1.694 - - 0.934 - - - 0.760 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
18. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.687 - - 0.978 - - 0.709 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
19. polr2j ENSDARG00000035146 1493 1.682 - - 0.965 - - 0.717 - - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
20. mrpl11 ENSDARG00000013075 2927 1.675 - - 0.965 - - - 0.710 - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
21. si:dkey-19e4.5 ENSDARG00000089886 2562 1.665 - 0.706 0.959 - - - - - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
22. slka ENSDARG00000061525 1678 1.662 - - 0.959 - 0.703 - - - - STE20-like kinase a [Source:ZFIN;Acc:ZDB-GENE-050411-66]
23. map9 ENSDARG00000037276, ENSDARG00000115648 581 1.66 - 0.896 - - - - 0.764 - - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
24. sfmbt2 ENSDARG00000045519 251 1.636 - 0.892 - - - - 0.744 - - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
25. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.613 - - 0.907 - - - 0.706 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
26. mtss1 ENSDARG00000059604 837 1.61 - 0.856 - - - - 0.754 - - metastasis suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081105-141]
27. zfpl1 ENSDARG00000103453 860 1.61 - - - - - 0.737 0.873 - - zinc finger protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1255]
28. ezh2 ENSDARG00000010571 3273 1.568 - 0.767 - - - - 0.801 - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
29. prpf4ba ENSDARG00000008784 936 1.553 - 0.807 - - - - 0.746 - - pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
30. slc9a7 ENSDARG00000076754 599 1.55 - 0.780 - - - - 0.770 - - solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 [Source:ZFIN;Acc:ZDB-GENE-050913-8]
31. orc5 ENSDARG00000021579 536 1.542 0.735 0.807 - - - - - - - origin recognition complex, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2275]
32. acap3a ENSDARG00000075990 9652 1.532 0.751 - - - - - 0.781 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
33. atp9b ENSDARG00000062521 915 1.53 - 0.797 - - - 0.733 - - - ATPase phospholipid transporting 9B [Source:ZFIN;Acc:ZDB-GENE-060503-583]
34. mcm4 ENSDARG00000040041 7971 1.517 - - 0.723 - - - 0.794 - - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
35. tfap4 ENSDARG00000103923 2203 1.517 - 0.816 - - - - 0.701 - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
36. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.517 - - 0.774 - - - 0.743 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
37. fscn1a ENSDARG00000059680 3999 1.516 - - - - - 0.747 0.769 - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
38. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.51 - 0.787 - - - - 0.723 - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
39. SENP7 SENP7 1097 1.509 - 0.775 - - - 0.734 - - -
40. tnpo2 ENSDARG00000038239 2469 1.499 0.746 0.753 - - - - - - - transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
41. memo1 ENSDARG00000010823 1681 1.492 - 0.782 - - - 0.710 - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
42. inip ENSDARG00000028523 1925 1.485 0.751 0.734 - - - - - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
43. ATP13A3 ENSDARG00000076622 1000 1.485 - 0.717 - - - - 0.768 - - ATPase 13A3 [Source:ZFIN;Acc:ZDB-GENE-120521-1]
44. rab23 ENSDARG00000004151 1077 1.483 - - - - - 0.767 0.716 - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
45. UACA UACA 1218 1.477 - - - - - 0.711 0.766 - -
46. adcy7 ENSDARG00000060070 1878 1.475 - 0.739 - - - - 0.736 - - adenylate cyclase 7 [Source:ZFIN;Acc:ZDB-GENE-040713-1]
47. pex16 ENSDARG00000058202 486 1.465 - - - - - 0.743 0.722 - - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
48. tldc1 ENSDARG00000062951 174 1.46 - 0.730 - - - 0.730 - - - TBC/LysM-associated domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-140]
49. DHX35 ENSDARG00000063419 602 1.448 - 0.711 - - - - 0.737 - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
50. CXXC5 CXXC5 1332 1.443 - - - - - 0.722 0.721 - -
51. LEPROTL1 ENSDARG00000104871 3019 1.44 0.740 - - - - - 0.700 - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
52. sept9b ENSDARG00000103900, ENSDARG00000113442 1495 1.434 - - - - - 0.729 0.705 - - septin 9b [Source:ZFIN;Acc:ZDB-GENE-050327-17]
53. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.432 0.731 - - - - - 0.701 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
54. stox2a ENSDARG00000070162 1620 1.402 - - - - - 0.700 0.702 - - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
55. gna13a ENSDARG00000073765 925 0.983 - - 0.983 - - - - - - guanine nucleotide binding protein (G protein), alpha 13a [Source:ZFIN;Acc:ZDB-GENE-030131-5024]
56. fzr1 fzr1 2984 0.982 - - 0.982 - - - - - -
57. tmem222a ENSDARG00000069589 1766 0.981 - - 0.981 - - - - - - transmembrane protein 222a [Source:ZFIN;Acc:ZDB-GENE-050306-17]
58. sec22a ENSDARG00000078328 1207 0.981 - - 0.981 - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
59. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.981 - - 0.981 - - - - - - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
60. rassf1 ENSDARG00000004840 1248 0.98 - - 0.980 - - - - - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
61. lrrc8a lrrc8a 674 0.98 - - 0.980 - - - - - -
62. ints8 ENSDARG00000057986 1063 0.98 - - 0.980 - - - - - - integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
63. pcbp2 ENSDARG00000099039 4248 0.979 - - 0.979 - - - - - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
64. CR387996.2 CR387996.2 1272 0.979 - - 0.979 - - - - - -
65. cxxc1 cxxc1 914 0.978 - - 0.978 - - - - - -
66. fam8a1 fam8a1 561 0.978 - - 0.978 - - - - - -
67. znf259 znf259 1819 0.978 - - 0.978 - - - - - -
68. ARHGAP23 ARHGAP23 3946 0.978 - - 0.978 - - - - - -
69. pdss2 ENSDARG00000012563 984 0.977 - - 0.977 - - - - - - prenyl (decaprenyl) diphosphate synthase, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040718-43]
70. ddx49 ENSDARG00000012899 1604 0.977 - - 0.977 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
71. si:ch211-59h6.1 ENSDARG00000013022 193 0.977 - - 0.977 - - - - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
72. nckipsd ENSDARG00000079475 777 0.977 - - 0.977 - - - - - - NCK interacting protein with SH3 domain [Source:ZFIN;Acc:ZDB-GENE-130326-2]
73. prep ENSDARG00000057151 3016 0.977 - - 0.977 - - - - - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
74. sfxn3 ENSDARG00000057374, ENSDARG00000112320 1766 0.977 - - 0.977 - - - - - - sideroflexin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2092]
75. NUDT8 ENSDARG00000007722 329 0.977 - - 0.977 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
76. ZNF648 ENSDARG00000104823 194 0.977 - - 0.977 - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
77. CT027778.1 CT027778.1 265 0.976 - - 0.976 - - - - - -
78. g6pca.1 ENSDARG00000031616 401 0.976 - - 0.976 - - - - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
79. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 0.976 - - 0.976 - - - - - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
80. ISCA2 ENSDARG00000038154 489 0.976 - - 0.976 - - - - - - iron-sulfur cluster assembly 2 [Source:ZFIN;Acc:ZDB-GENE-131121-486]
81. CABZ01112647.1 CABZ01112647.1 147 0.976 - - 0.976 - - - - - -
82. flr ENSDARG00000038024 562 0.976 - - 0.976 - - - - - - fleer [Source:ZFIN;Acc:ZDB-GENE-070117-2066]
83. cttnbp2nl cttnbp2nl 166 0.976 - - 0.976 - - - - - -
84. syt11a ENSDARG00000057913 1145 0.976 - - 0.976 - - - - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
85. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 0.976 - - 0.976 - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
86. ercc2 ENSDARG00000021985 678 0.976 - - 0.976 - - - - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
87. scd ENSDARG00000033662 146 0.976 - - 0.976 - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
88. ftr78 ftr78 273 0.976 - - 0.976 - - - - - -
89. nf1b ENSDARG00000004184 548 0.976 - - 0.976 - - - - - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
90. cplx2l ENSDARG00000018997 3975 0.976 - - 0.976 - - - - - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
91. zmat2 ENSDARG00000004956 1676 0.976 - - 0.976 - - - - - - zinc finger, matrin-type 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3197]
92. nsun2 ENSDARG00000056665 740 0.976 - - 0.976 - - - - - - NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
93. eda ENSDARG00000074591, ENSDARG00000113529 263 0.976 - - 0.976 - - - - - - ectodysplasin A [Source:ZFIN;Acc:ZDB-GENE-050107-6]
94. atxn7l3 ENSDARG00000029331 531 0.976 - - 0.976 - - - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
95. ELOVL4 ELOVL4 3026 0.976 - - 0.976 - - - - - -
96. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.975 - - 0.975 - - - - - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
97. HAUS2 HAUS2 392 0.975 - - 0.975 - - - - - -
98. trpt1 ENSDARG00000037628 1081 0.975 - - 0.975 - - - - - - tRNA phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050227-16]
99. faf1 ENSDARG00000022418 2922 0.975 - - 0.975 - - - - - - Fas (TNFRSF6) associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2863]
100. trpc4apb ENSDARG00000020647 670 0.975 - - 0.975 - - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]

There are 1201 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA