Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col6a3_1

Gene Name Gene ID Reads Annotation
col6a3_1 ENSDARG00000077139, ENSDARG00000095915 2 collagen, type VI, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070501-8]










Genes with expression patterns similar to col6a3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col6a3_1 ENSDARG00000077139, ENSDARG00000095915 2 2 - - - - 1.000 - - - 1.000 collagen, type VI, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070501-8]
2. si:ch73-199e17.1 ENSDARG00000094466 1 1 - - - - 1.000 - - - - si:ch73-199e17.1 [Source:ZFIN;Acc:ZDB-GENE-100921-8]
3. CR848784.2 ENSDARG00000111157 16 1 - - - - 1.000 - - - -
4. kalrna ENSDARG00000104119 8 1 - - - - 1.000 - - - - kalirin RhoGEF kinase a [Source:ZFIN;Acc:ZDB-GENE-100921-4]
5. pxn pxn 10 1 - - - - - - - - 1.000
6. rab3da ENSDARG00000018107 28 1 - - - - - - - - 1.000 RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
7. GPR97_1 GPR97_1 2 1 - - - - 1.000 - - - -
8. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - - 1.000 - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
9. FAM149A ENSDARG00000073709 7 1 - - - - - - - - 1.000 family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
10. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - - - 1.000 - - - -
11. cplx4a ENSDARG00000059978 6 1 - - - - 1.000 - - - - complexin 4a [Source:ZFIN;Acc:ZDB-GENE-060526-116]
12. si:ch211-113a14.26_1 5 1 - - - - 1.000 - - - - si:ch211-113a14.26
13. ENSDARG00000032477 ENSDARG00000032477 18 1 - - - - 1.000 - - - -
14. CR847844.5 CR847844.5 5 1 - - - - - - - - 1.000
15. il1rapl2 ENSDARG00000037553 9 1 - - - - 1.000 - - - - interleukin 1 receptor accessory protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040219-5]
16. BX005106.1_1 BX005106.1_1 1 1 - - - - 1.000 - - - -
17. ankrd33aa ENSDARG00000055638 6 1 - - - - 1.000 - - - - ankyrin repeat domain 33Aa [Source:ZFIN;Acc:ZDB-GENE-080520-2]
18. si:ch211-209j12.1 ENSDARG00000101634 2 1 - - - - - - - - 1.000 si:ch211-209j12.1 [Source:ZFIN;Acc:ZDB-GENE-120709-44]
19. zgc:112965 ENSDARG00000007787 5 1 - - - - - - - - 1.000 zgc:112965 [Source:ZFIN;Acc:ZDB-GENE-050522-10]
20. ABI3BP 2 1 - - - - 1.000 - - - - ABI family member 3 binding protein, transcript variant X3
21. BX088562.1 ENSDARG00000089255 3 1 - - - - 1.000 - - - - si:ch211-286c4.6 [Source:NCBI gene;Acc:100003678]
22. lrguk ENSDARG00000069698 5 1 - - - - - - - - 1.000 leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
23. U6_22 U6_22 1 1 - - - - 1.000 - - - -
24. ftr53 ENSDARG00000041220, ENSDARG00000110329, ENSDARG00000110400, ENSDARG00000116082 18 1 - - - - - - - - 1.000 finTRIM family, member 53 [Source:ZFIN;Acc:ZDB-GENE-030616-515]
25. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - - - - - - - - 1.000
26. tmprss3a ENSDARG00000053315 5 1 - - - - - - - - 1.000 transmembrane serine protease 3a [Source:ZFIN;Acc:ZDB-GENE-070912-70]
27. CR762436.2 ENSDARG00000112967 4 1 - - - - 1.000 - - - - si:dkey-261m9.8 [Source:NCBI gene;Acc:100329422]
28. si:dkey-8k3.1 si:dkey-8k3.1 1 1 - - - - 1.000 - - - -
29. ARHGAP21 ARHGAP21 1 1 - - - - - - - - 1.000
30. manba_1 ENSDARG00000008238 8 1 - - - - - - - - 1.000 mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
31. fkbp5 ENSDARG00000028396 20 1 - - - - 1.000 - - - - FK506 binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-030616-630]
32. il10ra ENSDARG00000100383 6 1 - - - - 1.000 - - - - interleukin 10 receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-070905-4]
33. si:dkeyp-118h3.7 si:dkeyp-118h3.7 1 1 - - - - - - - - 1.000
34. TMCC1_1 TMCC1_1 1 1 - - - - 1.000 - - - -
35. CR847893.4 CR847893.4 2 1 - - - - 1.000 - - - -
36. U1_6 U1_6 1 1 - - - - 1.000 - - - -
37. scn1a_1 2 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
38. dlg3 ENSDARG00000076796, ENSDARG00000111101 2 1 - - - - 1.000 - - - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
39. KHNYN ENSDARG00000092488 10 1 - - - - - - - - 1.000 KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
40. PAK6 PAK6 5 1 - - - - 1.000 - - - -
41. serpinf2a ENSDARG00000076448 4 1 - - - - 1.000 - - - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2a [Source:ZFIN;Acc:ZDB-GENE-060822-1]
42. U1_13 U1_13 1 1 - - - - 1.000 - - - -
43. mlc1 ENSDARG00000063026 29 1 - - - - 1.000 - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
44. si:dkey-40h20.1 ENSDARG00000095252 5 0.998 - - - - - - - - 0.998 si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
45. arhgap30 arhgap30 6 0.993 - - - - - - - - 0.993
46. gpr176 ENSDARG00000042515 5 0.979 - - - - - - - - 0.979 G protein-coupled receptor 176 [Source:ZFIN;Acc:ZDB-GENE-041001-183]
47. RNH1_2 RNH1_2 12 0.978 - - - - - - - - 0.978
48. CABZ01049058.1 CABZ01049058.1 7 0.978 - - - - - - - - 0.978
49. pcdh1g2 ENSDARG00000101232 5 0.973 - - - - 0.973 - - - - protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
50. HELZ2_2 ENSDARG00000012600 5 0.97 - - - - 0.970 - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
51. ENSDARG00000074422 ENSDARG00000074422 61 0.97 - - - - 0.970 - - - -
52. zgc:136908 ENSDARG00000011983 97 0.97 - - - - 0.970 - - - - zgc:136908 [Source:ZFIN;Acc:ZDB-GENE-060312-22]
53. f2rl2 ENSDARG00000090524 37 0.969 - - - - 0.969 - - - - coagulation factor II (thrombin) receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-110127-4]
54. CABZ01109624.1 CABZ01109624.1 25 0.964 - - - - - - - - 0.964
55. si:ch211-113a14.19 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 22 0.963 - - - - - - - - 0.963 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
56. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 0.958 - - - - 0.958 - - - -
57. BX640584.1 ENSDARG00000100855 1 0.958 - - - - 0.958 - - - -
58. H2AFX_1 H2AFX_1 28 0.948 - - - - - - - - 0.948
59. TMEM240 TMEM240 13 0.947 - - - - - - - - 0.947
60. zp3b ENSDARG00000039828 15 0.947 - - - - - - - - 0.947 zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
61. si:ch211-142h2.1 si:ch211-142h2.1 11 0.945 - - - - 0.945 - - - -
62. kiss2 ENSDARG00000077985 2 0.945 - - - - 0.945 - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
63. n6amt2 7 0.943 - - - - - - - - 0.943 N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
64. large 9 0.938 - - - - - - - - 0.938 like-glycosyltransferase, transcript variant X1
65. ZNRF4 ZNRF4 16 0.936 - - - - 0.936 - - - -
66. oprm1 ENSDARG00000039434 22 0.936 - - - - 0.936 - - - - opioid receptor, mu 1 [Source:ZFIN;Acc:ZDB-GENE-010125-1]
67. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 0.931 - - - - - - - - 0.931 potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
68. zgc:175008 zgc:175008 55 0.928 - - - - 0.928 - - - -
69. plscr3a ENSDARG00000093078 7 0.923 - - - - - - - - 0.923 phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
70. si:dkey-76d14.2 ENSDARG00000093458 11 0.92 - - - - 0.920 - - - - si:dkey-76d14.2 [Source:ZFIN;Acc:ZDB-GENE-070912-580]
71. pcolce2a ENSDARG00000008450 22 0.92 - - - - 0.920 - - - - procollagen C-endopeptidase enhancer 2a [Source:ZFIN;Acc:ZDB-GENE-070705-25]
72. MTMR3 ENSDARG00000093364, ENSDARG00000098201 11 0.911 - - - - - - - - 0.911 myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
73. si:dkey-19f21.8 si:dkey-19f21.8 12 0.91 - - - - 0.910 - - - -
74. trim54 ENSDARG00000029907 10 0.904 - - - - - - - - 0.904 tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
75. si:dkey-14d8.6 ENSDARG00000045835 72 0.901 - - - - - - - - 0.901 si:dkey-14d8.6 [Source:ZFIN;Acc:ZDB-GENE-041210-124]
76. angpt2b ENSDARG00000053906 19 0.901 - - - - 0.901 - - - - angiopoietin 2b [Source:ZFIN;Acc:ZDB-GENE-010817-2]
77. si:ch211-132b12.1 ENSDARG00000061480 3 0.893 - - - - 0.893 - - - - si:ch211-132b12.1 [Source:ZFIN;Acc:ZDB-GENE-050420-315]
78. mxd ENSDARG00000023369 8 0.887 - - - - 0.887 - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
79. si:dkey-229d11.5 ENSDARG00000094392 33 0.887 - - - - 0.887 - - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
80. rxfp3.2a 11 0.887 - - - - 0.887 - - - - relaxin/insulin-like family peptide receptor 3.2a
81. crybb3 ENSDARG00000041301 48 0.885 - - - - - - - - 0.885 crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
82. si:dkey-6o1.2 si:dkey-6o1.2 12 0.882 - - - - 0.882 - - - -
83. CU984584.1 CU984584.1 37 0.882 - - - - 0.882 - - - -
84. CABZ01085626.1 ENSDARG00000117294 8 0.882 - - - - 0.882 - - - -
85. zgc:153031 ENSDARG00000068876 73 0.88 - - - - 0.880 - - - - zgc:153031 [Source:ZFIN;Acc:ZDB-GENE-060929-1190]
86. cyp26b1 ENSDARG00000077121 1364 0.879 - - - - 0.879 - - - - cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
87. si:dkey-266h18.3 si:dkey-266h18.3 4 0.876 - - - - 0.876 - - - -
88. fgf20a ENSDARG00000007356, ENSDARG00000114219 25 0.863 - - - - 0.863 - - - - fibroblast growth factor 20a [Source:ZFIN;Acc:ZDB-GENE-060110-1]
89. EGR4_1 EGR4_1 14 0.861 - - - - 0.861 - - - -
90. egr2a ENSDARG00000044098 1101 0.859 - - - - 0.859 - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
91. mxg ENSDARG00000008019 4 0.858 - - - - 0.858 - - - - myxovirus (influenza virus) resistance G [Source:ZFIN;Acc:ZDB-GENE-030721-10]
92. xpnpep2 ENSDARG00000026017 16 0.856 - - - - 0.856 - - - - X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound [Source:ZFIN;Acc:ZDB-GENE-040426-1151]
93. klc1a ENSDARG00000009796 10 0.854 - - - - - - - - 0.854 kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
94. DHX32 DHX32 181 0.843 - - - - 0.843 - - - -
95. flnb ENSDARG00000092281 10 0.842 - - - - - - - - 0.842 filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
96. si:ch211-59h6.1 ENSDARG00000013022 193 0.842 - - - - 0.842 - - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
97. RBM33_1 RBM33_1 7 0.839 - - - - 0.839 - - - -
98. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 0.838 - - - - 0.838 - - - -
99. ADAMTS2 ENSDARG00000075930 7 0.833 - - - - 0.833 - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 2 [Source:ZFIN;Acc:ZDB-GENE-070816-3]
100. uvssa ENSDARG00000100916 73 0.83 - - - - 0.830 - - - - UV-stimulated scaffold protein A [Source:ZFIN;Acc:ZDB-GENE-091204-111]

There are 38 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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