Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col28a1

Gene Name Gene ID Reads Annotation
col28a1 col28a1 5










Genes with expression patterns similar to col28a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col28a1 col28a1 5 5 1.000 1.000 - - 1.000 - 1.000 - 1.000
2. ndufv3_1 ENSDARG00000090389 25 2.46 0.859 - - - - - 0.820 - 0.781 NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
3. irgq2 ENSDARG00000068657 4 2 1.000 - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
4. ddx26b 79 2 1.000 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
5. hoxc9a ENSDARG00000092809 18 2 1.000 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
6. GMEB2 ENSDARG00000093240 6 2 1.000 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
7. ifit2 ifit2 11 2 1.000 1.000 - - - - - - -
8. si:ch211-10p21.1 si:ch211-10p21.1 6 2 1.000 - - - 1.000 - - - -
9. arl11l arl11l 31 2 1.000 1.000 - - - - - - -
10. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 2 1.000 - - - - - 1.000 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
11. camk1db ENSDARG00000017446 47 2 - 1.000 - - - - 1.000 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
12. vmhcl 119 2 1.000 - - - - - 1.000 - - ventricular myosin heavy chain-like
13. si:ch211-170d12.2 si:ch211-170d12.2 1 2 1.000 - - - 1.000 - - - -
14. SNORA81_1 SNORA81_1 8 2 1.000 1.000 - - - - - - -
15. ETS1 ENSDARG00000024431 6 2 1.000 - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
16. fam163b ENSDARG00000073914 46 2 1.000 1.000 - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
17. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 2 1.000 1.000 - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
18. tbx5b ENSDARG00000092060 37 2 1.000 1.000 - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
19. si:dkeyp-46h3.2 ENSDARG00000092498 23 1.942 - - - - 0.942 - 1.000 - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
20. SRCIN1_1 SRCIN1_1 11 1.942 - 1.000 - - 0.942 - - - -
21. ARHGAP17 ARHGAP17 29 1.897 1.000 - - - 0.897 - - - -
22. BX119963.1 ENSDARG00000096135 28 1.892 1.000 - - - - - 0.892 - -
23. ABCA7 ABCA7 12 1.829 - 1.000 - - - - - - 0.829
24. si:ch211-176g6.1 ENSDARG00000096522 8 1.829 - 1.000 - - - - - - 0.829 si:ch211-176g6.1 [Source:ZFIN;Acc:ZDB-GENE-121214-106]
25. si:ch211-13k12.1 si:ch211-13k12.1 25 1.822 - 1.000 - - - - 0.822 - -
26. ZBTB40 ENSDARG00000091762 57 1.822 1.000 - - - - - 0.822 - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
27. adck3 83 1.772 1.000 - - - - - 0.772 - - aarF domain containing kinase 3
28. adam10b ENSDARG00000015502 26 1.757 1.000 - - - 0.757 - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
29. cpeb1a ENSDARG00000045932 81 1.737 0.915 0.822 - - - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
30. abcc6a ENSDARG00000016750 10 1.702 - 1.000 - - - - 0.702 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
31. SLC15A5 ENSDARG00000089974 18 1.685 - - - - 0.782 - 0.903 - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
32. wu:fe36b12 wu:fe36b12 118 1.566 - 0.844 - - - - 0.722 - -
33. lbx1b ENSDARG00000018611 399 1.498 - 0.789 - - - - 0.709 - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
34. casz1 ENSDARG00000037030 85 1.414 0.702 - - - - - 0.712 - - castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
35. BX465203.2 BX465203.2 23 1 - - - - - - 1.000 - -
36. irak3 ENSDARG00000053131 16 1 - - - - 1.000 - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
37. KCNAB2 KCNAB2 129 1 - 1.000 - - - - - - -
38. ddb1_1 ENSDARG00000074431 2 1 - - - - 1.000 - - - - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
39. AL928852.1 AL928852.1 23 1 - - - - - - 1.000 - -
40. CT573433.2 CT573433.2 115 1 - 1.000 - - - - - - -
41. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1 - 1.000 - - - - - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
42. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1 - 1.000 - - - - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
43. batf ENSDARG00000011818 2 1 - - - - 1.000 - - - - basic leucine zipper transcription factor, ATF-like [Source:ZFIN;Acc:ZDB-GENE-041014-291]
44. AL935186.3 ENSDARG00000109223 19 1 - 1.000 - - - - - - -
45. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - 1.000 - - - - - - -
46. cyp46a4 cyp46a4 5 1 - 1.000 - - - - - - -
47. trim46b ENSDARG00000058649 54 1 - 1.000 - - - - - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
48. BX323064.1 ENSDARG00000099914 11 1 1.000 - - - - - - - -
49. SQLE SQLE 1 1 - - - - 1.000 - - - -
50. cacnb2a ENSDARG00000099045 374 1 1.000 - - - - - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
51. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
52. CABZ01084273.1 CABZ01084273.1 16 1 - 1.000 - - - - - - -
53. mylk3 ENSDARG00000076348 19 1 - - - - - - 1.000 - - myosin light chain kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3497]
54. lingo1a ENSDARG00000034165 179 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
55. slc10a4 ENSDARG00000009131 51 1 1.000 - - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
56. SLC16A7 ENSDARG00000098258 4 1 - - - - 1.000 - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
57. TACR3 TACR3 1 1 - - - - 1.000 - - - -
58. Metazoa_SRP_2 Metazoa_SRP_2 2 1 1.000 - - - - - - - -
59. FP325123.1 ENSDARG00000105359 246 1 - - - - - - 1.000 - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
60. slc26a6l ENSDARG00000054127 8 1 - 1.000 - - - - - - - solute carrier family 26, member 6, like [Source:ZFIN;Acc:ZDB-GENE-080220-10]
61. si:dkey-117p18.2 si:dkey-117p18.2 104 1 1.000 - - - - - - - -
62. si:ch211-214p16.1 ENSDARG00000044129 64 1 - 1.000 - - - - - - - si:ch211-214p16.1 [Source:NCBI gene;Acc:368901]
63. FRMPD1 34 1 - 1.000 - - - - - - - FERM and PDZ domain containing 1, transcript variant X3
64. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 1.000 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
65. CABZ01080492.1 CABZ01080492.1 495 1 1.000 - - - - - - - -
66. PEG3_37 PEG3_37 4 1 - 1.000 - - - - - - -
67. CABZ01085054.1 CABZ01085054.1 20 1 1.000 - - - - - - - -
68. si:dkey-40n15.2 si:dkey-40n15.2 1 1 - 1.000 - - - - - - -
69. CU570987.1 CU570987.1 7 1 - 1.000 - - - - - - -
70. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
71. myo3b ENSDARG00000006892 0 1 - 1.000 - - - - - - - myosin IIIB [Source:ZFIN;Acc:ZDB-GENE-070706-2]
72. ttc22 ENSDARG00000077836 21 1 1.000 - - - - - - - - tetratricopeptide repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-050208-292]
73. DNAJC30 DNAJC30 47 1 - 1.000 - - - - - - -
74. PLEKHS1 ENSDARG00000079227 7 1 1.000 - - - - - - - - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
75. TMEM221 TMEM221 62 1 1.000 - - - - - - - -
76. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1 - 1.000 - - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
77. ptf1a ENSDARG00000014479 349 1 - 1.000 - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
78. DUSP19 DUSP19 10 1 - - - - 1.000 - - - -
79. ZBED1_5 ZBED1_5 1 1 1.000 - - - - - - - -
80. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1 - 1.000 - - - - - - - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
81. cyp4f3 ENSDARG00000053530 10 1 1.000 - - - - - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
82. COBLL1 COBLL1 14 1 1.000 - - - - - - - -
83. CR848784.2 ENSDARG00000111157 16 1 - - - - - - 1.000 - -
84. gpr155a ENSDARG00000090804 27 1 1.000 - - - - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
85. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - 1.000 - - - - - - -
86. si:dkey-57l19.1 ENSDARG00000098143 1 1 - 1.000 - - - - - - - si:dkey-57l19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-171]
87. FAM184A ENSDARG00000014081 34 1 - 1.000 - - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
88. CR339041.2_1 ENSDARG00000051711 0 1 - - - - 1.000 - - - -
89. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - 1.000 - - - - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
90. si:ch73-7i4.1 ENSDARG00000094554 771 1 - - - - - - 1.000 - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
91. KAZN_1 KAZN_1 13 1 1.000 - - - - - - - -
92. si:dkey-21n8.3 si:dkey-21n8.3 5 1 1.000 - - - - - - - -
93. CABZ01078481.1 CABZ01078481.1 6 1 1.000 - - - - - - - -
94. RNF214_1 RNF214_1 5 1 - 1.000 - - - - - - -
95. aspn ENSDARG00000002192 218 1 - 1.000 - - - - - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
96. TRPC4_1 TRPC4_1 212 1 - 1.000 - - - - - - -
97. gcdhl gcdhl 38 1 - - - - 1.000 - - - -
98. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - 1.000 - - - - - - -
99. csrnp1b ENSDARG00000038429 10 1 1.000 - - - - - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
100. OSBP2 ENSDARG00000053487 15 1 1.000 - - - - - - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]

There are 985 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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