Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chrnb1

Gene Name Gene ID Reads Annotation
chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]










Genes with expression patterns similar to chrnb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]
2. jph2 ENSDARG00000028625 6706 3.281 0.755 - - - - 0.854 0.916 - 0.756 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
3. enpp1 ENSDARG00000005789 3267 3.244 - 0.881 - 0.701 - 0.901 0.761 - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
4. trim55a ENSDARG00000029596 2858 2.537 - - - - - 0.881 0.881 - 0.775 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
5. mdh1b ENSDARG00000018008 3196 2.523 0.708 0.881 - - - - 0.934 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
6. cap2 ENSDARG00000104478 3266 2.478 - - - - - 0.787 0.964 0.727 - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
7. znf648 ENSDARG00000104823 1918 2.457 0.788 - - - - - 0.910 0.759 - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
8. sgcd ENSDARG00000098573 4980 2.454 0.786 - - - - - 0.928 - 0.740 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
9. mafa ENSDARG00000015890 2140 2.447 - 0.863 - - - - 0.860 - 0.724 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
10. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 2.446 0.831 - - - - - 0.886 - 0.729 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
11. klhl41b ENSDARG00000006757 10762 2.42 - - - - - 0.760 0.905 - 0.755 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
12. xirp2a ENSDARG00000071113 7113 2.413 - - - 0.715 - 0.758 0.940 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
13. tnnt2d ENSDARG00000002988 7590 2.387 0.824 - - - - 0.787 0.776 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
14. sptb ENSDARG00000030490 7128 2.382 - - - - - 0.743 0.890 - 0.749 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
15. tns1 tns1 5891 2.372 - 0.717 - - - 0.788 0.867 - -
16. ryr1b ENSDARG00000023797 5693 2.362 - - - - - - 0.892 0.751 0.719 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
17. pygmb ENSDARG00000013317 5454 2.351 - 0.771 - - - - 0.854 - 0.726 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
18. tnnt3a ENSDARG00000030270 112506 2.281 - - - - - - 0.765 0.773 0.743 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
19. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.243 - - - - - - 0.815 0.709 0.719 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
20. SPEG SPEG 4017 2.235 0.709 - - - - - 0.819 - 0.707
21. fgf6a ENSDARG00000009351 799 1.761 - - - - - 0.879 0.882 - - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
22. eef2k ENSDARG00000035835 2906 1.759 - - - - - 0.882 0.877 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
23. hsp90aa1.1 ENSDARG00000010478 47784 1.737 - - - - - 0.790 0.947 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
24. eif4eb ENSDARG00000013274, ENSDARG00000114799 1262 1.717 - - - - - 0.873 0.844 - - eukaryotic translation initiation factor 4eb [Source:ZFIN;Acc:ZDB-GENE-041121-14]
25. zgc:92518 ENSDARG00000016343 3837 1.716 0.794 - - - - - 0.922 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
26. pdcd4a ENSDARG00000021702 7293 1.705 - - - - - 0.823 0.882 - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
27. fbxl22 ENSDARG00000096995 1290 1.699 - - - 0.801 - - 0.898 - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
28. gmpr ENSDARG00000016160 1537 1.699 - - - - - 0.823 0.876 - - guanosine monophosphate reductase [Source:ZFIN;Acc:ZDB-GENE-050522-48]
29. lrrc8c ENSDARG00000099911 1499 1.691 - - - - - 0.802 0.889 - - leucine rich repeat containing 8 VRAC subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2965]
30. si:dkey-181m9.5 si:dkey-181m9.5 1079 1.689 - - - - - 0.809 0.880 - -
31. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 1.685 0.746 - - - - - 0.939 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
32. cacna2d1a ENSDARG00000014804 1924 1.683 0.743 - - - - - 0.940 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
33. nr4a1 ENSDARG00000000796, ENSDARG00000109473 1072 1.675 - - - - - 0.764 0.911 - - nuclear receptor subfamily 4, group A, member 1 [Source:ZFIN;Acc:ZDB-GENE-040704-11]
34. si:ch211-156j16.1 ENSDARG00000092035 7441 1.671 - - - - - - 0.940 - 0.731 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
35. ITGB1BP2 ENSDARG00000030176 2472 1.671 0.731 - - - - - 0.940 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
36. sar1ab ENSDARG00000033320 3984 1.668 - - - - - - 0.920 0.748 - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
37. ALDH1L2 ENSDARG00000070230 2550 1.668 0.780 - - - - - 0.888 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
38. trim101 ENSDARG00000018264 827 1.667 0.738 - - - - - 0.929 - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
39. rtn2a ENSDARG00000016088 12184 1.665 0.753 - - - - - 0.912 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
40. EEF1E1 ENSDARG00000071774 3806 1.659 - - - - - 0.845 0.814 - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
41. ndufs1 ENSDARG00000028546 5795 1.654 - - - - - 0.839 0.815 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
42. adss ENSDARG00000002071 5497 1.654 0.724 - - - - - 0.930 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
43. casq1b ENSDARG00000018105 2643 1.652 - - - - - - 0.917 - 0.735 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
44. fxr1 ENSDARG00000022968 2831 1.647 0.761 - - - - - 0.886 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
45. FSD2 518 1.647 - - - - - 0.777 0.870 - - fibronectin type III and SPRY domain containing 2
46. ATP5J 343 1.644 - 0.733 - - - - 0.911 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
47. COMP 2018 1.641 0.781 - - - - - 0.860 - - cartilage oligomeric matrix protein, transcript variant X1
48. cnbpb ENSDARG00000070922 14606 1.634 - - - - - 0.752 0.882 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
49. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.634 - - - - - - 0.929 - 0.705 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
50. txlnbb ENSDARG00000076241 6396 1.633 - - - - - - 0.907 - 0.726 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
51. kbtbd12 ENSDARG00000001882 1196 1.625 - - - - - - 0.857 0.768 - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
52. sox6 ENSDARG00000015536 7728 1.624 0.760 - - - - - 0.864 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
53. BX324201.1 BX324201.1 3302 1.624 - - - - - - 0.901 0.723 -
54. ank1 ank1 5209 1.618 0.727 0.891 - - - - - - -
55. unc45b ENSDARG00000008433 8298 1.618 0.703 - - - - - 0.915 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
56. mdh2 ENSDARG00000043371 14485 1.616 - - - - - - 0.877 - 0.739 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
57. gstm gstm 4064 1.614 - 0.785 - - - 0.829 - - -
58. BX294434.1 ENSDARG00000061272 6493 1.611 - - - - - - 0.903 - 0.708 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
59. cct3 ENSDARG00000016173 15869 1.611 0.719 - - - - - 0.892 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
60. SNORD33 SNORD33 3284 1.607 - 0.774 - - - 0.833 - - -
61. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.607 - - - - - - 0.897 - 0.710 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
62. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.605 - - - - - 0.775 0.830 - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
63. mybpc3 ENSDARG00000011615 7271 1.604 - 0.840 - - - - - - 0.764 myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
64. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.601 0.798 - - - - - 0.803 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
65. smyd2a ENSDARG00000055151 2505 1.6 0.773 - - - - - 0.827 - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
66. pygma ENSDARG00000055518 15972 1.6 0.733 - - - - - 0.867 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
67. CABZ01080590.2 CABZ01080590.2 2038 1.599 0.712 - - - - - 0.887 - -
68. efemp2a ENSDARG00000094324 39261 1.598 0.800 - - - - - 0.798 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
69. col11a1b ENSDARG00000009014 9998 1.597 - 0.708 - - - - 0.889 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
70. sgk2b ENSDARG00000006598 1039 1.593 - 0.877 - - - - 0.716 - - serum/glucocorticoid regulated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-44]
71. trdn ENSDARG00000041779 4283 1.592 - - - - - 0.764 0.828 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
72. flncb ENSDARG00000018820 5595 1.591 0.755 - - - - - 0.836 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
73. tomm34 ENSDARG00000001557 1874 1.591 - 0.828 - - - - 0.763 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
74. xirp2b ENSDARG00000091090 759 1.59 0.717 - - - - - 0.873 - - xin actin binding repeat containing 2b [Source:ZFIN;Acc:ZDB-GENE-030521-26]
75. nexn ENSDARG00000057317 10972 1.588 - - - - - - 0.869 - 0.719 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
76. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.587 - - - 0.710 - - 0.877 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
77. CCK CCK 1826 1.587 - - - - - 0.816 0.771 - -
78. kcnj13 ENSDARG00000043443 700 1.586 - 0.847 - - - 0.739 - - - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
79. chrna1 ENSDARG00000009021 2931 1.586 - - - - - - 0.849 - 0.737 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
80. mybphb ENSDARG00000003081 5208 1.585 - - - 0.765 - - 0.820 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
81. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.585 0.712 - - - - - 0.873 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
82. si:ch211-255p10.3 ENSDARG00000096616 8336 1.584 - - - - - 0.760 0.824 - - si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
83. alpk3a ENSDARG00000078989 1992 1.581 0.803 - - - - - 0.778 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
84. MYOT ENSDARG00000076312 1791 1.579 0.744 - - - - - 0.835 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
85. C1QBP ENSDARG00000039887 11186 1.575 0.746 - - - - - 0.829 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
86. pvalb4 ENSDARG00000024433 35736 1.574 0.759 - - - - - 0.815 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
87. synpo2b ENSDARG00000077157 1009 1.573 - - - - - - 0.844 - 0.729 synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
88. nmrk2 ENSDARG00000067848 10293 1.572 - - - 0.703 - - 0.869 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
89. synpo2lb ENSDARG00000078696 2361 1.569 0.714 - - - - - 0.855 - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
90. ppapdc3 ppapdc3 4924 1.562 0.708 - - - - - 0.854 - -
91. chrnd ENSDARG00000019342 2728 1.561 - - - - - - 0.844 - 0.717 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
92. CABZ01062780.1 CABZ01062780.1 250 1.56 - - 0.705 - - - 0.855 - -
93. chchd3 chchd3 4139 1.555 - 0.793 - - - - 0.762 - -
94. lrrc20 ENSDARG00000105018 1970 1.554 - - - - - - 0.825 0.729 - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
95. MUSTN1 MUSTN1 1882 1.554 - - - 0.700 - - 0.854 - -
96. GPRC5B GPRC5B 897 1.553 - - - - - 0.758 0.795 - -
97. tmem65 ENSDARG00000076393 1646 1.552 - 0.776 - - - - 0.776 - - transmembrane protein 65 [Source:ZFIN;Acc:ZDB-GENE-081022-99]
98. hs2st1a ENSDARG00000099478 864 1.549 0.808 - - - - - 0.741 - - heparan sulfate 2-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-2312]
99. mef2d ENSDARG00000040237 6144 1.548 - 0.791 - - - - 0.757 - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
100. srpk3 ENSDARG00000005916 1546 1.548 - - - - - 0.739 0.809 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]

There are 1043 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA