Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chgb

Gene Name Gene ID Reads Annotation
chgb ENSDARG00000076500 42 chromogranin B [Source:ZFIN;Acc:ZDB-GENE-070705-268]










Genes with expression patterns similar to chgb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chgb ENSDARG00000076500 42 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromogranin B [Source:ZFIN;Acc:ZDB-GENE-070705-268]
2. CR933820.2 CR933820.2 152 2.817 1.000 - - 0.836 - 0.981 - - -
3. crybb1 ENSDARG00000068507 2255 2.546 1.000 - - 0.731 - - - 0.815 - crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
4. zgc:110053 zgc:110053 69 2.348 - - - 0.790 - - 0.848 0.710 -
5. si:dkey-254e13.6 ENSDARG00000088301 191 1.944 1.000 - - - - 0.944 - - - si:dkey-254e13.6 [Source:ZFIN;Acc:ZDB-GENE-070705-420]
6. CAMKV CAMKV 11 1.927 1.000 - - - - 0.927 - - -
7. si:dkey-69c19.1 si:dkey-69c19.1 37 1.868 1.000 - - - - - 0.868 - -
8. LRRC41 LRRC41 11 1.848 1.000 - - - - - 0.848 - -
9. wu:fb64b08 wu:fb64b08 8 1.848 1.000 - - - - - 0.848 - -
10. BX927308.3 BX927308.3 126 1.836 1.000 - - - - - - 0.836 -
11. zgc:86723 zgc:86723 299 1.823 1.000 - - 0.823 - - - - -
12. zgc:110434_1 30 1.822 - - 0.870 - - 0.952 - - - zgc:110434
13. pde6c ENSDARG00000100397 49 1.806 1.000 - 0.806 - - - - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
14. RP1L1 RP1L1 15 1.804 - - - - - - 0.968 0.836 -
15. opn5 ENSDARG00000070110 18 1.8 - - - - - 0.952 0.848 - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
16. HIPK1 HIPK1 8 1.78 1.000 - - 0.780 - - - - -
17. ERAP1_1 ERAP1_1 64 1.768 - - 0.943 - 0.825 - - - -
18. crybb1l1 ENSDARG00000007576 1020 1.765 1.000 - - - - - - 0.765 - crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
19. pvrl4 155 1.747 - - 0.874 - - 0.873 - - - poliovirus receptor-related 4
20. si:dkey-27c15.3 ENSDARG00000056847 37 1.742 0.841 - 0.901 - - - - - - si:dkey-27c15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-728]
21. SH2D1B SH2D1B 60 1.728 - - - - - 0.880 0.848 - -
22. ms4a17a.9 ENSDARG00000094854 933 1.712 1.000 - 0.712 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
23. si:dkey-27j5.5 ENSDARG00000026383 6 1.684 - - - - - - 0.848 0.836 - si:dkey-27j5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-264]
24. ppp1r37 ENSDARG00000078458 49 1.666 - - 0.714 - - 0.952 - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
25. far1 ENSDARG00000006899 204 1.647 0.855 - - - - 0.792 - - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
26. rs1 rs1 70 1.646 - - 0.798 - - - 0.848 - -
27. si:ch211-145g9.7 32 1.623 - - - 0.787 - - - 0.836 - si:ch211-145g9.7, transcript variant X1
28. si:dkey-9i5.4 si:dkey-9i5.4 14 1.573 - - - 0.725 - - 0.848 - -
29. sc:d0661 sc:d0661 12 1.573 - - - 0.725 - - 0.848 - -
30. KCNK17 ENSDARG00000105453 16 1.559 0.710 - 0.849 - - - - - - potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
31. cryba1l1 ENSDARG00000032929 1868 1.554 - - - - - - 0.848 0.706 - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
32. grifin ENSDARG00000033382 141 1.493 0.786 - - - - - - 0.707 - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
33. GABRR1 ENSDARG00000043902 71 1.462 - - 0.712 - - 0.750 - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
34. lim2.3 ENSDARG00000037402 302 1.446 - - - 0.714 - - - 0.732 - lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]
35. cx23 ENSDARG00000054150 115 1.424 0.721 - - 0.703 - - - - - connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
36. CABZ01057633.1 CABZ01057633.1 39 1 1.000 - - - - - - - -
37. ENSDARG00000037617 ENSDARG00000037617 1 1 1.000 - - - - - - - -
38. esyt1b ENSDARG00000014239 8 1 1.000 - - - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
39. guca1c ENSDARG00000030758 9 1 1.000 - - - - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
40. sorcs3b ENSDARG00000077349 72 1 1.000 - - - - - - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
41. CU570684.5 CU570684.5 55 1 1.000 - - - - - - - -
42. si:dkey-85k15.4 ENSDARG00000095047 25 1 1.000 - - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
43. FAM124B ENSDARG00000087489 16 1 1.000 - - - - - - - - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
44. hrh3 ENSDARG00000035942 32 1 1.000 - - - - - - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
45. ift81 ENSDARG00000007444 97 1 1.000 - - - - - - - - intraflagellar transport 81 homolog [Source:ZFIN;Acc:ZDB-GENE-040714-3]
46. cd74a ENSDARG00000009087 20 1 1.000 - - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
47. slc5a9 ENSDARG00000005518 16 1 1.000 - - - - - - - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
48. TRIM35_12 TRIM35_12 2 1 1.000 - - - - - - - -
49. FP102801.1 FP102801.1 294 1 1.000 - - - - - - - -
50. CIT_1 CIT_1 6 1 1.000 - - - - - - - -
51. ifitm5 ENSDARG00000105153 132 1 1.000 - - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
52. ncaldb ENSDARG00000011334 123 1 1.000 - - - - - - - - neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
53. lcp1 ENSDARG00000023188 298 1 1.000 - - - - - - - - lymphocyte cytosolic protein 1 (L-plastin) [Source:ZFIN;Acc:ZDB-GENE-991213-5]
54. ccdc37 ccdc37 36 1 1.000 - - - - - - - -
55. BX005294.4 BX005294.4 8 1 1.000 - - - - - - - -
56. ppm1na ENSDARG00000010231 3 1 1.000 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
57. akap10 ENSDARG00000059549 1 1 1.000 - - - - - - - - A kinase (PRKA) anchor protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2535]
58. U1_48 U1_48 1 1 1.000 - - - - - - - -
59. nisch ENSDARG00000043077 11 1 1.000 - - - - - - - - nischarin [Source:ZFIN;Acc:ZDB-GENE-050208-570]
60. dnd dnd 33 1 1.000 - - - - - - - -
61. zgc:174310 ENSDARG00000076442 112 1 - - - - - - 1.000 - - zgc:174310 [Source:ZFIN;Acc:ZDB-GENE-081022-6]
62. si:dkey-101d6.4 si:dkey-101d6.4 6 1 1.000 - - - - - - - -
63. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 1.000 - - - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
64. ankdd1b ENSDARG00000025866 51 1 1.000 - - - - - - - - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
65. zgc:113295_2 ENSDARG00000074768, ENSDARG00000103947 4 1 1.000 - - - - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
66. BX005421.6 BX005421.6 4 1 1.000 - - - - - - - -
67. ENSDARG00000089062 ENSDARG00000089062 7 1 1.000 - - - - - - - -
68. C6H22orf23 C6H22orf23 15 1 1.000 - - - - - - - -
69. si:dkey-211g8.6 ENSDARG00000063088 19 1 1.000 - - - - - - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
70. zdhhc2 ENSDARG00000034757, ENSDARG00000110118 28 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]
71. shox ENSDARG00000025891 338 1 1.000 - - - - - - - - short stature homeobox [Source:ZFIN;Acc:ZDB-GENE-051030-21]
72. GPC6_1 GPC6_1 34 1 - - - - - - 1.000 - -
73. PFKL PFKL 9 1 1.000 - - - - - - - -
74. FBXL21 FBXL21 6 1 1.000 - - - - - - - -
75. si:dkey-42i9.8 ENSDARG00000071541 17 1 1.000 - - - - - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
76. si:ch73-386o14.1 si:ch73-386o14.1 82 1 1.000 - - - - - - - -
77. bicd1a ENSDARG00000079496 2 1 1.000 - - - - - - - - bicaudal D homolog 1a [Source:ZFIN;Acc:ZDB-GENE-081031-9]
78. PKHD1L1 ENSDARG00000091116 39 1 1.000 - - - - - - - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
79. si:dkey-258f14.3 ENSDARG00000075974 9 1 1.000 - - - - - - - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
80. ctc1 ENSDARG00000070119 8 1 - - - - - - 1.000 - - CTS telomere maintenance complex component 1 [Source:ZFIN;Acc:ZDB-GENE-061103-271]
81. pou2f2b pou2f2b 134 1 1.000 - - - - - - - -
82. gpr124 gpr124 25 1 1.000 - - - - - - - -
83. CABZ01062083.1 CABZ01062083.1 40 1 1.000 - - - - - - - -
84. Mar-03 Mar-03 44 1 1.000 - - - - - - - -
85. dgcr8 ENSDARG00000035564, ENSDARG00000113898 39 1 - - - - - - 1.000 - - DGCR8 microprocessor complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-3421]
86. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1 1.000 - - - - - - - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
87. C4H12orf39 C4H12orf39 73 1 1.000 - - - - - - - -
88. anpepb ENSDARG00000103878 8 1 1.000 - - - - - - - - alanyl (membrane) aminopeptidase b [Source:ZFIN;Acc:ZDB-GENE-030131-1253]
89. CABZ01021435.3 CABZ01021435.3 5 1 1.000 - - - - - - - -
90. gltpd2 ENSDARG00000067889, ENSDARG00000114510 27 1 1.000 - - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
91. hamp2 hamp2 67 1 1.000 - - - - - - - -
92. BX323793.1 ENSDARG00000104134 24 1 1.000 - - - - - - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
93. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 1.000 - - - - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
94. CR391995.1 ENSDARG00000098041 48 1 1.000 - - - - - - - -
95. PDE9A ENSDARG00000060280 58 1 1.000 - - - - - - - - phosphodiesterase 9A [Source:ZFIN;Acc:ZDB-GENE-130920-1]
96. myo1f ENSDARG00000078734 100 1 1.000 - - - - - - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
97. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 1.000 - - - - - - - -
98. SH2D4A ENSDARG00000041378 6 1 1.000 - - - - - - - - SH2 domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-040426-932]
99. mettl20 56 1 - - - - - - 1.000 - - methyltransferase like 20
100. hsd3b1 ENSDARG00000069926 35 1 1.000 - - - - - - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]

There are 948 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA