Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chaf1a

Gene Name Gene ID Reads Annotation
chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]










Genes with expression patterns similar to chaf1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
2. hnrpdl 14288 3.602 0.926 0.849 0.853 0.974 - - - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
3. prr12a ENSDARG00000074229 1668 3.224 - 0.965 0.808 - - 0.738 0.713 - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
4. vdac1 ENSDARG00000045132 8051 3.178 - - - 0.828 0.776 0.729 0.845 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
5. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 3.044 - - 0.757 - - - 0.788 0.773 0.726 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
6. lsm14ab ENSDARG00000100553 3837 2.624 - - - 0.985 - 0.791 0.848 - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
7. ncapd2 ENSDARG00000005058 2819 2.586 - 0.969 - - - - 0.846 - 0.771 non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
8. carm1 ENSDARG00000018698 5599 2.57 0.970 - 0.889 - - - 0.711 - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
9. taf6l ENSDARG00000079684 1408 2.533 0.975 - 0.815 - - - - 0.743 - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
10. brd4 ENSDARG00000078904 5367 2.53 0.968 - 0.832 - - - - 0.730 - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
11. stmn1a ENSDARG00000004169 21169 2.527 - - - 0.965 - - 0.798 - 0.764 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
12. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 2.469 - - - 0.982 - 0.770 - - 0.717 eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
13. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.454 - - - - 0.746 0.779 0.929 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
14. hnrnpul1 ENSDARG00000040564 6550 2.449 - - 0.868 0.826 - - - - 0.755 heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
15. kpna2 ENSDARG00000038066 7954 2.445 0.924 - - - 0.754 - - - 0.767 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
16. hmgb2b ENSDARG00000053990 11519 2.44 - - - 0.965 - - 0.771 - 0.704 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
17. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 2.437 - 0.967 - - 0.769 - - - 0.701 nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
18. zmiz1a ENSDARG00000074502 3920 2.427 - - 0.886 - - 0.768 0.773 - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
19. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.39 - - 0.777 - 0.761 - 0.852 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
20. snrpc ENSDARG00000009871 9567 2.381 - 0.945 - - - - 0.708 - 0.728 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
21. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.379 - - 0.911 - 0.703 - 0.765 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
22. prmt1 ENSDARG00000010246 11311 2.376 - - - 0.920 - 0.730 0.726 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
23. hdac1 ENSDARG00000015427 19804 2.371 - 0.854 - - - 0.743 - - 0.774 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
24. rnf10 ENSDARG00000079687 6768 2.37 - 0.908 - - - 0.715 0.747 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
25. si:ch73-18b11.1 si:ch73-18b11.1 3840 2.364 - - 0.850 - - - - 0.795 0.719
26. ubtf ENSDARG00000035066 4070 2.359 - - 0.884 - - - 0.762 - 0.713 upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
27. epc2 ENSDARG00000007485 1200 2.354 - - - - - 0.891 0.726 0.737 - enhancer of polycomb homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-802]
28. ilf3b ENSDARG00000105177 9473 2.349 - - 0.866 - 0.774 - 0.709 - - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
29. hnrnpub ENSDARG00000004735 16496 2.346 - - - - 0.805 - 0.796 - 0.745 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
30. anp32b ENSDARG00000023330 25013 2.31 - 0.743 - - - 0.752 0.815 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
31. wu:fq41a10 wu:fq41a10 7009 2.299 - - 0.875 - 0.709 - 0.715 - -
32. rps11 ENSDARG00000053058 16233 2.241 0.769 0.733 - - - 0.739 - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
33. znf319 znf319 3027 2.238 - - - - - 0.749 0.788 - 0.701
34. u2af1 ENSDARG00000015325 3217 2.213 - - - - 0.740 - - 0.716 0.757 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
35. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 2.204 - - - - 0.741 - 0.736 - 0.727 structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
36. nkain1 ENSDARG00000006859 1961 2.164 - - - - - 0.735 0.723 - 0.706 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
37. ddx19 ENSDARG00000005699 4602 2.128 - - - - - 0.705 0.716 - 0.707 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
38. cbx3b ENSDARG00000092158 1976 1.964 0.980 - - 0.984 - - - - - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
39. capn2b ENSDARG00000055592 5431 1.944 - 0.974 - 0.970 - - - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
40. arl8a ENSDARG00000078686 4379 1.928 0.953 0.975 - - - - - - - ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
41. cd2ap ENSDARG00000015224 2830 1.922 0.976 0.946 - - - - - - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
42. vimp 4034 1.911 - 0.929 - 0.982 - - - - - VCP-interacting membrane selenoprotein
43. elmod2 ENSDARG00000101669 3101 1.848 - - 0.862 0.986 - - - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
44. dla ENSDARG00000010791 9281 1.847 - - 0.866 0.981 - - - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
45. creb1a ENSDARG00000053586 5068 1.835 - - - 0.988 - - 0.847 - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
46. ppp2r2a ppp2r2a 5785 1.831 0.982 - - - - - 0.849 - -
47. nin ENSDARG00000060298 1558 1.826 - - 0.837 0.989 - - - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
48. nucks1b ENSDARG00000012777 4468 1.81 - - - 0.990 - - 0.820 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
49. cltcb ENSDARG00000090716 5544 1.806 0.947 - - - - - 0.859 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
50. wu:fb17g07 wu:fb17g07 10567 1.799 - - - 0.977 - - 0.822 - -
51. get4 ENSDARG00000024398 1818 1.796 0.972 - - - - - 0.824 - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
52. pinx1 ENSDARG00000023532 4452 1.788 - - 0.807 0.981 - - - - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
53. syncripl ENSDARG00000026723 3889 1.784 - - 0.912 - - - 0.872 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
54. mapre1b ENSDARG00000002659 9119 1.779 - - - 0.973 - 0.806 - - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
55. erlin1 ENSDARG00000021991 5664 1.779 - 0.975 0.804 - - - - - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
56. tmed1b ENSDARG00000017255 2238 1.778 0.972 - - - - - 0.806 - - transmembrane p24 trafficking protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1112]
57. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.771 - 0.973 0.798 - - - - - - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
58. srsf5b ENSDARG00000027734 6996 1.768 0.951 - 0.817 - - - - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
59. rap2c ENSDARG00000015649 4709 1.767 - 0.943 - - - - 0.824 - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
60. ppp4cb ENSDARG00000076439 1693 1.766 0.939 - 0.827 - - - - - - protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
61. aqr ENSDARG00000016775 1581 1.766 - 0.968 0.798 - - - - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
62. u2surp ENSDARG00000061490 2814 1.764 - 0.963 - - - 0.801 - - - U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
63. hoxc8a ENSDARG00000070346 4252 1.762 0.947 - - - - - 0.815 - - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
64. sub1a ENSDARG00000053446 13383 1.761 - - - 0.956 0.805 - - - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
65. zgc:77262 ENSDARG00000044545 5563 1.76 - - - 0.986 - - 0.774 - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
66. im:7136729 im:7136729 1625 1.759 - 0.962 0.797 - - - - - -
67. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.752 0.970 - - - - - 0.782 - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
68. taf10 ENSDARG00000068641 3333 1.751 - - - 0.983 - - 0.768 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
69. ppp2r5a ENSDARG00000027017 2397 1.748 - 0.764 - 0.984 - - - - - protein phosphatase 2, regulatory subunit B', alpha isoform [Source:ZFIN;Acc:ZDB-GENE-040724-174]
70. thoc7 ENSDARG00000015394 3824 1.748 - - - 0.988 - - 0.760 - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
71. fgfr2 ENSDARG00000058115 6743 1.745 0.934 - - - 0.811 - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
72. zgc:86598 ENSDARG00000014222 3664 1.745 0.972 - - - - 0.773 - - - zgc:86598 [Source:ZFIN;Acc:ZDB-GENE-040625-181]
73. gtpbp4 ENSDARG00000018961 5323 1.745 0.975 - - - - - - - 0.770 GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
74. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 1.744 0.980 - - - - - 0.764 - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
75. PSIP1 PSIP1 5252 1.743 - 0.957 - - - - 0.786 - -
76. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.741 - - - 0.988 0.753 - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
77. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.741 0.918 - - 0.823 - - - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
78. atpif1a 6030 1.737 - 0.944 0.793 - - - - - - ATPase inhibitory factor 1a
79. arid1ab ENSDARG00000101891 1722 1.729 - 0.965 - - - - 0.764 - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
80. elavl1 11672 1.722 - - - 0.972 - 0.750 - - - ELAV like RNA binding protein 1, transcript variant X3
81. map1lc3b ENSDARG00000101127 3958 1.719 - 0.973 - - - - 0.746 - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
82. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.717 0.980 - - - - - - - 0.737 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
83. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.716 - - - 0.977 - - 0.739 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
84. h2afva ENSDARG00000068820 16427 1.716 - - - - - 0.853 0.863 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
85. meis3 ENSDARG00000002795 2509 1.709 - - - 0.981 - - 0.728 - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
86. znf292b ENSDARG00000043973 3791 1.709 - - 0.862 - - - 0.847 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
87. znf207a ENSDARG00000015538 2630 1.708 - - 0.850 - - - 0.858 - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
88. atp1b3a ENSDARG00000015790 12310 1.706 - - 0.722 0.984 - - - - - ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
89. pank1b ENSDARG00000010098 3202 1.706 - 0.963 - - - - 0.743 - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
90. eif3ha ENSDARG00000102452 9238 1.704 - - - 0.977 - - 0.727 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
91. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.701 - 0.968 - - 0.733 - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
92. supt16h ENSDARG00000079949 4755 1.699 - - - 0.984 - - 0.715 - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
93. dusp1 ENSDARG00000100515 2338 1.695 0.978 - - - - - 0.717 - - dual specificity phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2018]
94. lig3 ENSDARG00000052553 2665 1.694 - - - 0.983 - - 0.711 - - ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
95. nucks1a ENSDARG00000078473 28285 1.694 - - - 0.858 - 0.836 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
96. ube2v1 ENSDARG00000041875 5739 1.692 0.942 - - - - - 0.750 - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
97. znf865 ENSDARG00000036698 15532 1.688 - - - - - 0.824 0.864 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
98. rab5c ENSDARG00000026712 4733 1.685 - 0.871 0.814 - - - - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
99. hnrnpk ENSDARG00000018914 8841 1.685 - 0.941 - - - - 0.744 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
100. hp1bp3 ENSDARG00000044669 23708 1.684 - - - 0.943 - 0.741 - - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]

There are 1603 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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