Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ch25hl2

Gene Name Gene ID Reads Annotation
ch25hl2 ENSDARG00000038728 100 cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]










Genes with expression patterns similar to ch25hl2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ch25hl2 ENSDARG00000038728 100 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
2. lyz ENSDARG00000057789, ENSDARG00000109290, ENSDARG00000114098 5991 3.291 - - - - - 0.936 0.832 0.777 0.746 lysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
3. mms19 ENSDARG00000079067 65 1.92 1.000 - - - 0.920 - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
4. C3AR1 18 1.89 1.000 - - - - 0.890 - - - C3a anaphylatoxin chemotactic receptor
5. ftr42 4 1.89 1.000 - - - - 0.890 - - - finTRIM family, member 42
6. crygn2 ENSDARG00000030411 2551 1.803 0.913 - - - - 0.890 - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
7. bckdhb ENSDARG00000014676 17 1.775 1.000 - - - - - 0.775 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
8. pls1 ENSDARG00000039272 39 1.775 1.000 - - - - - 0.775 - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
9. si:ch1073-429i10.1 ENSDARG00000075664 471 1.759 - - - - - 0.962 - 0.797 - si:ch1073-429i10.1 [Source:ZFIN;Acc:ZDB-GENE-120215-259]
10. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1.75 1.000 - - - - 0.750 - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
11. si:ch211-274p24.4 ENSDARG00000087088 36 1.738 1.000 - - - - - 0.738 - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
12. zgc:163077 ENSDARG00000101593 60 1.727 1.000 - - - - - 0.727 - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
13. atxn1b ENSDARG00000060862 345 1.721 1.000 - 0.721 - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
14. si:ch211-139g16.8 ENSDARG00000093074 13 1.71 - - - - - 0.935 0.775 - - si:ch211-139g16.8 [Source:ZFIN;Acc:ZDB-GENE-100922-126]
15. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.705 - - - - 0.815 0.890 - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
16. zp3a.2 ENSDARG00000042130 163 1.697 0.913 - - - 0.784 - - - - zona pellucida glycoprotein 3a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040727-2]
17. si:dkey-85k15.4 ENSDARG00000095047 25 1.681 - - - - 0.906 - 0.775 - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
18. ripply3 ENSDARG00000036974 30 1.681 - - - - 0.875 0.806 - - - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
19. CABZ01117079.1 CABZ01117079.1 123 1.676 0.871 - - - - - 0.805 - -
20. npsn ENSDARG00000010423 768 1.675 - - - - - 0.955 0.720 - - nephrosin [Source:ZFIN;Acc:ZDB-GENE-040420-2]
21. ccdc147 ccdc147 39 1.671 - - - - - 0.896 0.775 - -
22. ppfia2 ENSDARG00000013000 45 1.671 - - - - - 0.896 0.775 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
23. tmem174 ENSDARG00000035388 2 1.665 - - - - - 0.890 0.775 - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
24. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1.665 - - - - - 0.890 0.775 - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
25. AL954132.1 AL954132.1 1 1.665 - - - - - 0.890 0.775 - -
26. CR354540.1 ENSDARG00000004051 10 1.665 - - - - - 0.890 0.775 - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
27. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1.665 - - - - - 0.890 0.775 - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
28. lrrc15 ENSDARG00000070792, ENSDARG00000110931 124 1.633 - - - 0.764 - 0.869 - - - leucine rich repeat containing 15 [Source:ZFIN;Acc:ZDB-GENE-031113-8]
29. BCL2 BCL2 122 1.625 0.769 - - - 0.856 - - - -
30. BX511227.1 ENSDARG00000102499 111 1.621 - - - - 0.727 0.894 - - -
31. BX511006.2 BX511006.2 29 1.613 0.723 - - - - 0.890 - - -
32. TAF4_1 TAF4_1 30 1.606 - - - 0.716 - 0.890 - - -
33. rab4a ENSDARG00000019144 192 1.584 0.823 - - - 0.761 - - - - RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
34. ADAM12 ENSDARG00000116062 35 1.578 - - - - - - 0.779 - 0.799 ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
35. fbxo36b ENSDARG00000039152 7 1.574 - - - - - - 0.775 - 0.799 F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
36. mthfsd ENSDARG00000062042 34 1.548 0.773 - - - - - 0.775 - - methenyltetrahydrofolate synthetase domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-3513]
37. mpx ENSDARG00000019521 562 1.547 - - - - - - 0.797 0.750 - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
38. CU367845.1_1 CU367845.1_1 43 1.52 - - - - - - 0.775 - 0.745
39. star ENSDARG00000006137 149 1.497 - - - - - 0.722 0.775 - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
40. plac8l1 ENSDARG00000069031 161 1.487 - - - 0.712 - - 0.775 - - PLAC8-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-165]
41. fech ENSDARG00000003462 212 1.48 - - - - - 0.705 0.775 - - ferrochelatase [Source:ZFIN;Acc:ZDB-GENE-000928-1]
42. CU694368.1 CU694368.1 56 1.467 - - - - - 0.755 0.712 - -
43. SLC47A1_1 SLC47A1_1 130 1.454 - - - - - 0.745 0.709 - -
44. si:ch211-15j1.1 ENSDARG00000093177 1 1 1.000 - - - - - - - - si:ch211-15j1.1 [Source:ZFIN;Acc:ZDB-GENE-081031-25]
45. KCNAB1 KCNAB1 918 1 1.000 - - - - - - - -
46. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
47. BX470254.1_1 ENSDARG00000097402 50 1 1.000 - - - - - - - -
48. CIR1 ENSDARG00000099733 66 1 1.000 - - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
49. c6ast1 ENSDARG00000069216 8 1 1.000 - - - - - - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
50. fam19a5 fam19a5 8 1 1.000 - - - - - - - -
51. dand5 ENSDARG00000036471 8 1 1.000 - - - - - - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
52. si:dkey-60a16.4 si:dkey-60a16.4 14 1 1.000 - - - - - - - -
53. CU694319.1 CU694319.1 72 1 1.000 - - - - - - - -
54. elfn2 elfn2 1 1 1.000 - - - - - - - -
55. pak1_1 ENSDARG00000103959 28 1 1.000 - - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
56. CECR6 25 1 1.000 - - - - - - - - cat eye syndrome chromosome region, candidate 6
57. dapk3 ENSDARG00000074447 12 1 1.000 - - - - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
58. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
59. me1 ENSDARG00000053215 107 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
60. cntn5 ENSDARG00000021584 30 1 1.000 - - - - - - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
61. CABZ01066717.2 CABZ01066717.2 10 1 1.000 - - - - - - - -
62. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 1.000 - - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
63. si:dkey-34e4.1 ENSDARG00000022085 5 1 1.000 - - - - - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
64. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
65. tecrl2 tecrl2 11 1 1.000 - - - - - - - -
66. MPPED1 ENSDARG00000088181 117 1 1.000 - - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
67. CABZ01044346.1 CABZ01044346.1 12 1 1.000 - - - - - - - -
68. MLLT4 MLLT4 67 1 1.000 - - - - - - - -
69. oprm1 ENSDARG00000039434 22 1 1.000 - - - - - - - - opioid receptor, mu 1 [Source:ZFIN;Acc:ZDB-GENE-010125-1]
70. si:dkey-156m18.1 si:dkey-156m18.1 13 1 1.000 - - - - - - - -
71. cdcp1a ENSDARG00000058943 70 1 1.000 - - - - - - - - CUB domain containing protein 1a [Source:ZFIN;Acc:ZDB-GENE-050327-55]
72. edil3 edil3 24 1 1.000 - - - - - - - -
73. HIST1H2BA ENSDARG00000116654 10 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
74. shox2 ENSDARG00000075713 104 1 1.000 - - - - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
75. setmar ENSDARG00000074836 29 1 1.000 - - - - - - - - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
76. GPR22_1 GPR22_1 28 1 1.000 - - - - - - - -
77. APCDD1 ENSDARG00000098203 10 1 1.000 - - - - - - - - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
78. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
79. ABCA7 ABCA7 12 1 1.000 - - - - - - - -
80. CABZ01070007.1 CABZ01070007.1 5 1 1.000 - - - - - - - -
81. ftr14l ENSDARG00000078254 2 1 1.000 - - - - - - - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
82. paqr7a ENSDARG00000100462 15 1 1.000 - - - - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
83. mamdc2b ENSDARG00000073695 26 1 1.000 - - - - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
84. slc5a2 ENSDARG00000100919 47 1 1.000 - - - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
85. nmrk1 ENSDARG00000037913 18 1 1.000 - - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
86. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1 1.000 - - - - - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
87. opn5 ENSDARG00000070110 18 1 1.000 - - - - - - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
88. BX000999.2 BX000999.2 2353 1 1.000 - - - - - - - -
89. msxa msxa 263 1 1.000 - - - - - - - -
90. myl2b ENSDARG00000053424 226 1 1.000 - - - - - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
91. usp47 ENSDARG00000102645 16 1 1.000 - - - - - - - - ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
92. zgc:110191 zgc:110191 359 1 1.000 - - - - - - - -
93. cog1 ENSDARG00000105131 35 1 1.000 - - - - - - - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
94. prelp ENSDARG00000070597 99 1 1.000 - - - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
95. si:dkey-57k2.7 ENSDARG00000060395, ENSDARG00000095191 5 1 1.000 - - - - - - - - si:dkey-57k2.7 [Source:ZFIN;Acc:ZDB-GENE-070912-559]
96. si:ch211-152l15.4 si:ch211-152l15.4 13 1 1.000 - - - - - - - -
97. figf 48 1 1.000 - - - - - - - - c-fos induced growth factor, transcript variant X2
98. si:dkey-247m21.3 ENSDARG00000001906 1 1 1.000 - - - - - - - - si:dkey-247m21.3 [Source:ZFIN;Acc:ZDB-GENE-091204-249]
99. fbxo43 ENSDARG00000104186 40 1 1.000 - - - - - - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
100. sez6l ENSDARG00000100594 35 1 1.000 - - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]

There are 1204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA