Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdk9

Gene Name Gene ID Reads Annotation
cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]










Genes with expression patterns similar to cdk9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
2. ppig ENSDARG00000044431 3427 1.822 0.960 - - - - - - - 0.862 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
3. sbf1 ENSDARG00000062968, ENSDARG00000111535 1287 1.802 0.990 0.812 - - - - - - - SET binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-139]
4. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.793 0.867 - - - - - - - 0.926 ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
5. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.781 0.981 0.800 - - - - - - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
6. arpc4l ENSDARG00000058225 10107 1.77 0.829 - - - - - - - 0.941 actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
7. wu:fj13e08 1223 1.761 0.990 - - - - - 0.771 - - wu:fj13e08
8. npepl1 ENSDARG00000012871 3064 1.743 0.977 - - - - 0.766 - - - aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-177]
9. aacs ENSDARG00000012468 1138 1.738 0.988 0.750 - - - - - - - acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
10. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.733 0.982 - - - - - 0.751 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
11. lipin2 2021 1.729 0.969 0.760 - - - - - - - lipin 2, transcript variant X2
12. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.728 0.985 0.743 - - - - - - - connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
13. gorasp1 gorasp1 3075 1.725 0.965 0.760 - - - - - - -
14. sult6b1 ENSDARG00000086826 2070 1.719 0.983 0.736 - - - - - - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
15. ctbp2 ctbp2 3255 1.713 0.932 0.781 - - - - - - -
16. FAM210A FAM210A 437 1.712 0.990 0.722 - - - - - - -
17. ck2a1 ck2a1 3749 1.701 0.980 - - - - - 0.721 - -
18. fam50a ENSDARG00000024895 3020 1.697 0.959 - - - - - - 0.738 - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
19. itsn1 ENSDARG00000000086 684 1.697 0.986 0.711 - - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
20. ptbp3 ENSDARG00000043757 6760 1.692 0.931 - - - - - - - 0.761 polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
21. lrrc40 ENSDARG00000017708 1156 1.69 0.950 - - - - 0.740 - - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
22. hnrpl 6412 1.68 0.942 0.738 - - - - - - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
23. e2f8 ENSDARG00000057323 1432 1.678 0.949 - - - - - 0.729 - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
24. neo1 neo1 4056 1.678 0.978 - - - - - 0.700 - -
25. wipi1 ENSDARG00000040657 2732 1.67 0.924 - - - - - - - 0.746 WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
26. TRMT10A ENSDARG00000036678 621 1.661 - 0.794 - - - - - - 0.867 tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
27. plekha1 plekha1 1509 1.656 - - - - - - 0.731 - 0.925
28. NGEF ENSDARG00000076179 445 1.641 - - - - - - 0.774 - 0.867 neuronal guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-130530-794]
29. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 1.639 0.937 0.702 - - - - - - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
30. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 1.638 - - - 0.770 - - - - 0.868 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
31. homer3 homer3 1974 1.613 - - - - - - 0.743 - 0.870
32. gli2b ENSDARG00000020884 1468 1.613 - - - - - - 0.750 - 0.863 GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
33. smad2 ENSDARG00000006389 646 1.611 - 0.742 - - - - - - 0.869 SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
34. nol10 ENSDARG00000020077 984 1.611 - 0.742 - - - - - - 0.869 nucleolar protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-764]
35. zgc:112964 ENSDARG00000101200 4751 1.603 0.790 0.813 - - - - - - - zgc:112964 [Source:ZFIN;Acc:ZDB-GENE-050306-47]
36. ubqln4 ENSDARG00000052975 6453 1.59 0.870 - - - - - 0.720 - - ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
37. ARAP2 ARAP2 428 1.59 - - - - - - 0.724 - 0.866
38. gsg1l ENSDARG00000037390 181 1.586 - 0.719 - - - - - - 0.867 gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
39. kpna4 ENSDARG00000023190 2505 1.574 - - - 0.718 - - - - 0.856 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
40. tfdp1b ENSDARG00000016304 3071 1.573 - - - - - - 0.704 - 0.869 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
41. si:ch211-10d23.5 ENSDARG00000095510 2632 1.572 - - - - - - 0.714 - 0.858 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
42. entpd2a.2 ENSDARG00000033953 389 1.571 - 0.705 - - - - - - 0.866 ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
43. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.57 - 0.760 - - - - - - 0.810 slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
44. tnpo2 ENSDARG00000038239 2469 1.566 - 0.840 - - - - 0.726 - - transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
45. grsf1 ENSDARG00000053021 2752 1.564 - - - - - - 0.706 - 0.858 G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
46. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.564 - - - - - - 0.722 - 0.842 enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
47. acvr2aa ENSDARG00000011188 1454 1.554 - 0.813 - - - 0.741 - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
48. pum1 ENSDARG00000099256 5017 1.553 - 0.815 - - - - 0.738 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
49. rpp21 ENSDARG00000043404, ENSDARG00000109965 469 1.543 - 0.775 - - - - 0.768 - - ribonuclease P 21 subunit [Source:ZFIN;Acc:ZDB-GENE-040801-37]
50. atp5o 10343 1.538 0.836 - - - - 0.702 - - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
51. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.515 - 0.763 - - - - - - 0.752 A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
52. fen1 ENSDARG00000011404 3358 1.505 - 0.790 - - - - 0.715 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
53. FBXL3 FBXL3 1769 1.487 - 0.730 - - - - 0.757 - -
54. dgcr14 1608 1.484 - 0.715 - - - - 0.769 - - DiGeorge syndrome critical region gene 14
55. C19H16orf80 C19H16orf80 1327 1.46 - - - - - 0.716 0.744 - -
56. rbbp5 ENSDARG00000042147 702 1.433 - 0.727 - - - - - 0.706 - retinoblastoma binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-886]
57. fgfr4 ENSDARG00000069105 3593 1.433 - 0.710 - - - - 0.723 - - fibroblast growth factor receptor 4 [Source:ZFIN;Acc:ZDB-GENE-980526-488]
58. SLC6A16_1 SLC6A16_1 1130 0.993 0.993 - - - - - - - -
59. wdtc1 ENSDARG00000059760 1218 0.992 0.992 - - - - - - - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
60. HOMEZ HOMEZ 1824 0.992 0.992 - - - - - - - -
61. mboat2a ENSDARG00000031845 1255 0.992 0.992 - - - - - - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
62. ttc27 ENSDARG00000007918 1228 0.991 0.991 - - - - - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
63. sec23ip ENSDARG00000061413 804 0.991 0.991 - - - - - - - - SEC23 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5259]
64. zgc:66448 ENSDARG00000022952 1045 0.991 0.991 - - - - - - - - zgc:66448 [Source:ZFIN;Acc:ZDB-GENE-030131-5612]
65. selj 884 0.991 0.991 - - - - - - - - selenoprotein J
66. poll ENSDARG00000039613 395 0.991 0.991 - - - - - - - - polymerase (DNA directed), lambda [Source:ZFIN;Acc:ZDB-GENE-040426-2712]
67. zrsr2 ENSDARG00000058448 335 0.991 0.991 - - - - - - - - zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495]
68. nab1b ENSDARG00000040700 289 0.991 0.991 - - - - - - - - NGFI-A binding protein 1b (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-081105-85]
69. cab39 ENSDARG00000043451 1326 0.991 0.991 - - - - - - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
70. pfkfb3 ENSDARG00000001953 656 0.991 0.991 - - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
71. mark3 mark3 1375 0.99 0.990 - - - - - - - -
72. ENSDARG00000076021 ENSDARG00000076021 162 0.99 0.990 - - - - - - - -
73. itga6b ENSDARG00000069946, ENSDARG00000110478 1126 0.99 0.990 - - - - - - - - integrin, alpha 6b [Source:ZFIN;Acc:ZDB-GENE-050320-5]
74. si:ch211-71m22.1 ENSDARG00000058638 169 0.99 0.990 - - - - - - - - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
75. ENSDARG00000090222 ENSDARG00000090222 402 0.99 0.990 - - - - - - - -
76. MYADML2 ENSDARG00000053953 810 0.99 0.990 - - - - - - - - myeloid-associated differentiation marker-like 2 [Source:ZFIN;Acc:ZDB-GENE-120807-3]
77. ppcs ENSDARG00000061889 224 0.99 0.990 - - - - - - - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
78. slc25a36a ENSDARG00000038731, ENSDARG00000111673 2008 0.99 0.990 - - - - - - - - solute carrier family 25 (pyrimidine nucleotide carrier ), member 36a [Source:ZFIN;Acc:ZDB-GENE-040718-415]
79. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.99 0.990 - - - - - - - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
80. adrb2b ENSDARG00000054510, ENSDARG00000111730 428 0.99 0.990 - - - - - - - - adrenoceptor beta 2, surface b [Source:ZFIN;Acc:ZDB-GENE-070410-32]
81. fam192a ENSDARG00000041631 4113 0.99 0.990 - - - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
82. sos1 ENSDARG00000100503 388 0.99 0.990 - - - - - - - - son of sevenless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070209-128]
83. MRAS_1 ENSDARG00000075285 318 0.99 0.990 - - - - - - - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
84. evi5b ENSDARG00000070839 239 0.99 0.990 - - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
85. IRF2 ENSDARG00000040465 453 0.99 0.990 - - - - - - - - interferon regulatory factor 2 [Source:ZFIN;Acc:ZDB-GENE-041212-38]
86. si:dkey-10f21.16 si:dkey-10f21.16 252 0.99 0.990 - - - - - - - -
87. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 0.99 0.990 - - - - - - - - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
88. tfcp2 ENSDARG00000060306 1024 0.99 0.990 - - - - - - - - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
89. TTC9 ENSDARG00000074363 196 0.989 0.989 - - - - - - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
90. camlg ENSDARG00000100409 2157 0.989 0.989 - - - - - - - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
91. ets2 ENSDARG00000103980 451 0.989 0.989 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-050522-552]
92. hepacam2 ENSDARG00000061365, ENSDARG00000109776 219 0.989 0.989 - - - - - - - - HEPACAM family member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-135]
93. b4galnt3b ENSDARG00000058939 413 0.989 0.989 - - - - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8615]
94. tead3a ENSDARG00000074321 2240 0.989 0.989 - - - - - - - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
95. PDCL3 ENSDARG00000100651 164 0.989 0.989 - - - - - - - - phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]
96. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 0.989 0.989 - - - - - - - - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
97. BAHD1 ENSDARG00000086789 1194 0.989 0.989 - - - - - - - - bromo adjacent homology domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120411-42]
98. cp ENSDARG00000010312 1245 0.989 0.989 - - - - - - - - ceruloplasmin [Source:ZFIN;Acc:ZDB-GENE-010522-1]
99. amer1 ENSDARG00000079624, ENSDARG00000117033 1370 0.989 0.989 - - - - - - - - APC membrane recruitment protein 1 [Source:ZFIN;Acc:ZDB-GENE-070719-2]
100. usp4 ENSDARG00000014770 1684 0.988 0.988 - - - - - - - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]

There are 1117 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA