Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdc42ep4a

Gene Name Gene ID Reads Annotation
cdc42ep4a ENSDARG00000101457, ENSDARG00000114480 1226 CDC42 effector protein (Rho GTPase binding) 4a [Source:ZFIN;Acc:ZDB-GENE-040704-22]










Genes with expression patterns similar to cdc42ep4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdc42ep4a ENSDARG00000101457, ENSDARG00000114480 1226 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDC42 effector protein (Rho GTPase binding) 4a [Source:ZFIN;Acc:ZDB-GENE-040704-22]
2. pcmtd1 ENSDARG00000053152 564 2.216 0.714 - - - - - 0.747 0.755 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5387]
3. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.215 - - - 0.709 0.710 - - 0.796 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
4. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.743 - - - 0.836 0.907 - - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
5. amer2 ENSDARG00000075222 594 1.712 - - - - 0.883 - - 0.829 - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
6. timm23 timm23 2712 1.696 - 0.911 - 0.785 - - - - -
7. PPP1R8 PPP1R8 1897 1.683 - - - - 0.847 - - 0.836 -
8. cpt1a cpt1a 674 1.668 - - - - 0.894 - - 0.774 -
9. si:ch211-198b3.1 si:ch211-198b3.1 765 1.667 - - - 0.787 0.880 - - - -
10. TTF1_5 TTF1_5 705 1.654 - - - 0.761 0.893 - - - -
11. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.642 - - - - 0.812 - - 0.830 - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
12. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.637 - - - - 0.853 - - 0.784 - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
13. TMEM71 TMEM71 696 1.636 - 0.858 - - - - - 0.778 -
14. usp49 ENSDARG00000000229 706 1.632 - - - 0.762 0.870 - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
15. ccnd2a ENSDARG00000051748 2506 1.628 - 0.765 - 0.863 - - - - - cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
16. cxxc1 cxxc1 914 1.624 - - - 0.730 0.894 - - - -
17. ddx27 ENSDARG00000091831 1471 1.623 - - - - 0.844 - - 0.779 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
18. etv1 ENSDARG00000101959 358 1.622 - - - - 0.898 - - 0.724 - ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]
19. C2H1orf35 C2H1orf35 652 1.62 - - - 0.742 0.878 - - - -
20. mgaa ENSDARG00000078784 1344 1.612 - - - - 0.867 - - 0.745 - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
21. sart3 ENSDARG00000008032 2594 1.612 - - - 0.806 - - - 0.806 - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
22. ormdl1 ENSDARG00000014333 1589 1.607 - 0.869 - 0.738 - - - - - ORMDL sphingolipid biosynthesis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030616-529]
23. si:dkey-67c22.2 ENSDARG00000055389 6410 1.602 - 0.893 - - - - - 0.709 - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
24. CABZ01080568.2 CABZ01080568.2 2137 1.601 - - - 0.870 0.731 - - - -
25. tspan5b ENSDARG00000070449 1056 1.6 - 0.775 - - 0.825 - - - - tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
26. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.594 - - - 0.742 0.852 - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
27. zgc:55733 ENSDARG00000103845 1550 1.594 - - - 0.759 - - - 0.835 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
28. NIPBL NIPBL 871 1.593 - 0.855 - 0.738 - - - - -
29. get4 ENSDARG00000024398 1818 1.592 - - - - 0.865 - 0.727 - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
30. CABZ01066717.1 CABZ01066717.1 351 1.592 - 0.835 - - - - - 0.757 -
31. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 1.591 - 0.730 - - - - - 0.861 - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
32. mgll ENSDARG00000036820 747 1.584 - - - 0.712 0.872 - - - - monoglyceride lipase [Source:ZFIN;Acc:ZDB-GENE-031006-9]
33. crp4 714 1.582 - - - 0.750 0.832 - - - - C-reactive protein 4
34. ZNF576 ZNF576 1447 1.58 - - - - 0.834 - - 0.746 -
35. ap3s2 ENSDARG00000039882 2149 1.575 - 0.801 - - - - - 0.774 - adaptor related protein complex 3 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-040718-274]
36. dock7 ENSDARG00000078675 1995 1.575 - - - - 0.873 0.702 - - - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
37. prr11 ENSDARG00000087393 677 1.574 - - - 0.717 0.857 - - - - proline rich 11 [Source:ZFIN;Acc:ZDB-GENE-091118-97]
38. ogfr ENSDARG00000037837 1001 1.569 - - - - 0.841 - - 0.728 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
39. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.567 - - - - - - 0.740 0.827 - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
40. nr2f1b ENSDARG00000017168 1487 1.563 - - - 0.731 0.832 - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
41. tbl1xr1b ENSDARG00000008966 2203 1.557 - 0.717 - - - - 0.840 - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
42. rfc2 ENSDARG00000014274 1533 1.556 - 0.793 - - - - - 0.763 - replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]
43. kdm5c ENSDARG00000006124 4389 1.553 - - - - 0.845 - 0.708 - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
44. mus81 ENSDARG00000069326, ENSDARG00000111800 400 1.552 0.775 - - 0.777 - - - - - MUS81 structure-specific endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2923]
45. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 1.546 - 0.831 - 0.715 - - - - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
46. knop1 ENSDARG00000077721 2198 1.534 - - - - 0.787 - - 0.747 - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
47. SPTBN4_1 ENSDARG00000092624 473 1.534 - - - 0.771 - - - 0.763 - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
48. usp45 ENSDARG00000075013 227 1.533 - 0.796 - - - - - 0.737 - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
49. TTYH3 TTYH3 1841 1.526 - - - - 0.724 - - 0.802 -
50. BX000999.4_1 BX000999.4_1 222 1.526 - 0.773 - 0.753 - - - - -
51. laptm4b ENSDARG00000035870, ENSDARG00000110893 960 1.525 - - - 0.742 - - - 0.783 - lysosomal protein transmembrane 4 beta [Source:ZFIN;Acc:ZDB-GENE-030616-616]
52. TMEM87B ENSDARG00000112581 798 1.522 - 0.735 - - - - - 0.787 - transmembrane protein 87B [Source:HGNC Symbol;Acc:HGNC:25913]
53. C1H4orf27 C1H4orf27 1961 1.519 - - - - 0.725 - - 0.794 -
54. hif1an ENSDARG00000031915 2098 1.514 - - - 0.732 - - - 0.782 - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
55. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.512 - - - 0.754 - - - 0.758 - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
56. birc5a ENSDARG00000075621 2256 1.507 - 0.754 - 0.753 - - - - - baculoviral IAP repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030826-1]
57. dctd ENSDARG00000036990 2168 1.507 - 0.744 - - 0.763 - - - - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
58. aco1 ENSDARG00000026376 5034 1.503 - 0.732 - - 0.771 - - - - aconitase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-031118-76]
59. nfkbiab ENSDARG00000007693 1345 1.495 - 0.778 - 0.717 - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
60. dnajc1 ENSDARG00000001940 2848 1.495 - 0.701 - - - - 0.794 - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
61. mrps23 ENSDARG00000033973 2265 1.493 - - - - 0.737 - 0.756 - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
62. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.488 - - - 0.778 - - - 0.710 - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
63. rps27.2_1 ENSDARG00000055475 2786 1.488 - - - - 0.782 - 0.706 - - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
64. wdr13 ENSDARG00000022974 1283 1.484 - 0.728 - - - - 0.756 - - WD repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-050522-274]
65. aup1 ENSDARG00000092609 2431 1.478 - 0.778 - - - 0.700 - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
66. mrps14 ENSDARG00000068305 1648 1.478 - - - - 0.731 - 0.747 - - mitochondrial ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-060825-75]
67. cwc25 ENSDARG00000003382 2134 1.477 - - - 0.720 - - - 0.757 - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
68. NUDT12 ENSDARG00000100813 378 1.477 - 0.766 - - - - - 0.711 - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
69. ube2d2l ENSDARG00000099749 1462 1.47 - 0.764 - - - - 0.706 - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
70. dnttip2 ENSDARG00000057648 2381 1.467 - 0.702 - - - - - 0.765 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
71. znhit2 ENSDARG00000030805 197 1.466 0.707 - - 0.759 - - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
72. tmed4 ENSDARG00000024954 3476 1.458 - 0.704 - - - - - 0.754 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
73. srsf6b ENSDARG00000016783 9926 1.451 - - - - - - 0.721 0.730 - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
74. CABZ01085888.1 CABZ01085888.1 868 1.451 - 0.726 - 0.725 - - - - -
75. CR847925.1 CR847925.1 835 1.445 - 0.725 - - - - - 0.720 -
76. tcea1 ENSDARG00000003531 2912 1.444 - - - - - - - 0.737 0.707 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
77. dnajc7_1 ENSDARG00000058148 687 1.441 - - - - - - 0.733 0.708 - DnaJ (Hsp40) homolog, subfamily C, member 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2483]
78. cdan1 ENSDARG00000042261 658 1.441 - - - 0.736 - - - 0.705 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
79. acbd3 ENSDARG00000042623 2643 1.431 - 0.713 - 0.718 - - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
80. fkbp4 ENSDARG00000008447 3736 1.421 - 0.708 - - 0.713 - - - - FK506 binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-514]
81. zswim5 ENSDARG00000055900 4243 1.408 - 0.700 - - - - - 0.708 - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
82. slc35b4 ENSDARG00000071087 1030 1.408 - - - - - - 0.702 0.706 - solute carrier family 35, member B4 [Source:ZFIN;Acc:ZDB-GENE-030131-2457]
83. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.933 - 0.933 - - - - - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
84. anxa13l ENSDARG00000013613 631 0.93 - - - - 0.930 - - - - annexin A13, like [Source:ZFIN;Acc:ZDB-GENE-050522-310]
85. jund ENSDARG00000067850 744 0.925 - 0.925 - - - - - - - JunD proto-oncogene, AP-1 transcription factor subunit [Source:ZFIN;Acc:ZDB-GENE-070725-2]
86. usp25 ENSDARG00000012314 734 0.924 - - - - 0.924 - - - - ubiquitin specific peptidase 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2847]
87. JPH3 ENSDARG00000102204 283 0.922 - - - - 0.922 - - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
88. ftr67 ENSDARG00000098820 611 0.921 - - - - 0.921 - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
89. plekhj1 ENSDARG00000025593 696 0.919 - - - - 0.919 - - - - pleckstrin homology domain containing, family J member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2480]
90. LPL_1 LPL_1 1150 0.917 - - - - 0.917 - - - -
91. tyr ENSDARG00000039077 568 0.916 - - - - 0.916 - - - - tyrosinase [Source:ZFIN;Acc:ZDB-GENE-991026-3]
92. nudt2 ENSDARG00000058728 371 0.914 - - - - 0.914 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
93. amotl2a ENSDARG00000061923 4713 0.912 - - - - 0.912 - - - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
94. cdc45 ENSDARG00000043720 353 0.912 - - - - 0.912 - - - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
95. PDZD8 ENSDARG00000088699 844 0.911 - 0.911 - - - - - - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
96. nfs1 ENSDARG00000062237 2741 0.911 - - - - 0.911 - - - - NFS1 cysteine desulfurase [Source:ZFIN;Acc:ZDB-GENE-060405-1]
97. cbx4 ENSDARG00000099441 372 0.911 - - - - 0.911 - - - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
98. aldh3b1 ENSDARG00000013839 796 0.909 - 0.909 - - - - - - - aldehyde dehydrogenase 3 family, member B1 [Source:ZFIN;Acc:ZDB-GENE-021120-3]
99. chuk ENSDARG00000011662 1668 0.907 - - - - 0.907 - - - - conserved helix-loop-helix ubiquitous kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1069]
100. MON1B_1 MON1B_1 697 0.907 - - - - 0.907 - - - -

There are 1441 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA