Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdc42ep1b

Gene Name Gene ID Reads Annotation
cdc42ep1b ENSDARG00000077792 1569 CDC42 effector protein (Rho GTPase binding) 1b [Source:ZFIN;Acc:ZDB-GENE-120215-219]










Genes with expression patterns similar to cdc42ep1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdc42ep1b ENSDARG00000077792 1569 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDC42 effector protein (Rho GTPase binding) 1b [Source:ZFIN;Acc:ZDB-GENE-120215-219]
2. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 2.547 0.743 0.845 - - - - 0.959 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
3. acbd3 ENSDARG00000042623 2643 2.345 - 0.754 - - - 0.701 0.890 - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
4. tmem184a ENSDARG00000104538 661 1.823 - 0.869 - - - - 0.954 - - transmembrane protein 184a [Source:ZFIN;Acc:ZDB-GENE-040426-2925]
5. sec22ba ENSDARG00000030108 1273 1.775 - 0.847 - - - - 0.928 - - SEC22 homolog B, vesicle trafficking protein a [Source:ZFIN;Acc:ZDB-GENE-010724-3]
6. srrm2 ENSDARG00000037965 1967 1.757 - - - - - 0.809 0.948 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
7. clptm1l ENSDARG00000021048 1234 1.755 - 0.825 - - - - 0.930 - - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
8. sdpra sdpra 4594 1.736 - 0.852 - - - - 0.884 - -
9. adipor1b ENSDARG00000042717 1348 1.734 - 0.793 - - - - 0.941 - - adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
10. AMDHD1 ENSDARG00000007366 89 1.729 - - - - - 0.785 0.944 - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
11. zgc:92380 ENSDARG00000041339 1867 1.725 - 0.818 - - - - 0.907 - - zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
12. wtap ENSDARG00000042642 1779 1.725 - 0.751 - - - - 0.974 - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
13. sptbn2 ENSDARG00000053956 8452 1.718 - - - - - 0.762 0.956 - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
14. dusp2 ENSDARG00000098108 353 1.715 - - - - - 0.769 0.946 - - dual specificity phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-188]
15. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.713 - 0.809 - - - - 0.904 - - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
16. mpzl3 959 1.713 - 0.767 - - - - 0.946 - - myelin protein zero-like 3
17. PDZD8 ENSDARG00000088699 844 1.706 - 0.762 - - - - 0.944 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
18. bin2b ENSDARG00000010255 2649 1.701 - 0.761 - - - - 0.940 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
19. ifrd1 ENSDARG00000068708 2858 1.699 - 0.748 - - - - 0.951 - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
20. atf6 ENSDARG00000012656 3873 1.696 - - - - - 0.771 0.925 - - activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
21. rab11al ENSDARG00000014340 2116 1.682 - 0.766 - - - - 0.916 - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
22. CACHD1 ENSDARG00000061590 1287 1.679 - 0.732 - - - - 0.947 - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
23. mpdu1b ENSDARG00000040265 1968 1.666 - 0.710 - - - - 0.956 - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
24. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.662 - - - - - 0.847 0.815 - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
25. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.662 - 0.707 - - - - 0.955 - - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
26. timm23 timm23 2712 1.661 - 0.709 - - - - 0.952 - -
27. shroom4 ENSDARG00000079900 1852 1.658 - - - - - 0.708 0.950 - - shroom family member 4 [Source:ZFIN;Acc:ZDB-GENE-041111-246]
28. sc:d173 sc:d173 1279 1.657 - 0.728 - - - - 0.929 - -
29. RBBP8NL RBBP8NL 813 1.65 - - - - - 0.717 0.933 - -
30. si:ch211-71n6.4 ENSDARG00000102234 2499 1.648 - 0.748 - - - 0.900 - - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
31. svopl ENSDARG00000057983, ENSDARG00000116460 975 1.631 - - - - - 0.713 0.918 - - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
32. ARHGAP23 ARHGAP23 3946 1.631 - - - - - - 0.901 0.730 -
33. SLC6A13 ENSDARG00000067567 1617 1.61 - 0.808 - - - - 0.802 - - solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
34. ndrg1a ENSDARG00000032849 2406 1.576 - - - - - 0.703 0.873 - - N-myc downstream regulated 1a [Source:ZFIN;Acc:ZDB-GENE-030826-34]
35. pnpla7b ENSDARG00000040002 1217 1.552 - 0.717 - - - 0.835 - - - patatin-like phospholipase domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-050309-66]
36. elovl1b ENSDARG00000103735 2783 1.543 - 0.701 - - - - 0.842 - - ELOVL fatty acid elongase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2755]
37. sik2b ENSDARG00000062315 1303 1.478 - 0.716 - - - 0.762 - - - salt-inducible kinase 2b [Source:ZFIN;Acc:ZDB-GENE-071012-1]
38. hand2 ENSDARG00000008305 1214 1.471 - 0.712 - - - 0.759 - - - heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
39. MTMR4 1374 1.471 - 0.760 - - - 0.711 - - - myotubularin related protein 4, transcript variant X3
40. sh3bgrl3 ENSDARG00000098075 3071 1.466 - 0.739 - - - 0.727 - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
41. myrf ENSDARG00000078676 614 1.466 0.729 - - - - 0.737 - - - myelin regulatory factor [Source:ZFIN;Acc:ZDB-GENE-080204-57]
42. cdc14b ENSDARG00000021483 4958 0.984 - - - - - - 0.984 - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
43. abcb7 ENSDARG00000062795 1404 0.967 - - - - - - 0.967 - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
44. mastl ENSDARG00000055566 1487 0.967 - - - - - - 0.967 - - microtubule associated serine/threonine kinase-like [Source:ZFIN;Acc:ZDB-GENE-040801-128]
45. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 0.965 - - - - - - 0.965 - - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
46. BAHD1 ENSDARG00000086789 1194 0.964 - - - - - - 0.964 - - bromo adjacent homology domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120411-42]
47. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 0.962 - - - - - - 0.962 - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
48. pes ENSDARG00000018902 3286 0.962 - - - - - - 0.962 - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
49. ppargc1a ENSDARG00000067829 772 0.962 - - - - - - 0.962 - - peroxisome proliferator-activated receptor gamma, coactivator 1 alpha [Source:ZFIN;Acc:ZDB-GENE-080505-1]
50. pcid2 ENSDARG00000013802 1596 0.962 - - - - - - 0.962 - - PCI domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041114-79]
51. lrpap1 ENSDARG00000033604, ENSDARG00000116453 1389 0.962 - - - - - - 0.962 - - low density lipoprotein receptor-related protein associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5871]
52. lnx2b ENSDARG00000071478 654 0.961 - - - - - - 0.961 - - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
53. tmem181 ENSDARG00000045910 2288 0.961 - - - - - - 0.961 - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
54. itpkcb ENSDARG00000067741 2370 0.961 - - - - - - 0.961 - - inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
55. VPS37B_1 VPS37B_1 1816 0.961 - - - - - - 0.961 - -
56. tmed4 ENSDARG00000024954 3476 0.961 - - - - - - 0.961 - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
57. sigmar1 ENSDARG00000011418 1240 0.96 - - - - - - 0.960 - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
58. reps1 ENSDARG00000002877 962 0.96 - - - - - - 0.960 - - RALBP1 associated Eps domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9536]
59. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 0.96 - - - - - - 0.960 - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
60. gnb1b_1 ENSDARG00000104372 3728 0.959 - - - - - - 0.959 - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
61. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 0.959 - - - - - - 0.959 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
62. zgc:66014 817 0.959 - - - - - - 0.959 - - zgc:66014, transcript variant X6
63. dennd5b ENSDARG00000003789 1152 0.958 - - - - - - 0.958 - - DENN/MADD domain containing 5B [Source:ZFIN;Acc:ZDB-GENE-030131-2248]
64. h6pd ENSDARG00000060153, ENSDARG00000114064 1927 0.958 - - - - - - 0.958 - - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-110408-60]
65. smc5 ENSDARG00000044282 779 0.958 - - - - - - 0.958 - - structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]
66. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 0.958 - - - - - - 0.958 - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
67. si:dkey-82i20.5 ENSDARG00000116717 2965 0.957 - - - - - - 0.957 - - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
68. kmt2a ENSDARG00000004537 2169 0.956 - - - - - - 0.956 - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
69. lamb4 ENSDARG00000039133 1220 0.955 - - - - - - 0.955 - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
70. CABZ01079427.1 CABZ01079427.1 1682 0.955 - - - - - - 0.955 - -
71. uhrf1 ENSDARG00000103409 3282 0.955 - - - - - - 0.955 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
72. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 0.955 - - - - - - 0.955 - - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
73. scinlb ENSDARG00000058348 1466 0.955 - - - - - - 0.955 - - scinderin like b [Source:ZFIN;Acc:ZDB-GENE-040426-2068]
74. cbx2 ENSDARG00000044938 1576 0.955 - - - - - - 0.955 - - chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
75. rab27a ENSDARG00000103935 1173 0.955 - - - - - - 0.955 - - RAB27A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050913-46]
76. tmem59 ENSDARG00000019033 2692 0.955 - - - - - - 0.955 - - transmembrane protein 59 [Source:ZFIN;Acc:ZDB-GENE-070912-397]
77. lzic ENSDARG00000055899 638 0.954 - - - - - - 0.954 - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
78. acadsb ENSDARG00000076780 2382 0.954 - - - - - - 0.954 - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
79. hnrpkl ENSDARG00000007034 4660 0.953 - - - - - - 0.953 - - heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
80. smurf1 ENSDARG00000016086 878 0.953 - - - - - - 0.953 - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
81. snrnp70 ENSDARG00000077126 5921 0.953 - - - - - - 0.953 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
82. gmps ENSDARG00000079848 8217 0.953 - - - - - - 0.953 - - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
83. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.953 - - - - - - 0.953 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
84. laptm4a ENSDARG00000006397 1698 0.953 - - - - - - 0.953 - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
85. agk ENSDARG00000009837, ENSDARG00000113514 811 0.952 - - - - - - 0.952 - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
86. coro1a ENSDARG00000054610, ENSDARG00000111327 479 0.952 - - - - - - 0.952 - - coronin, actin binding protein, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-9512]
87. gbas gbas 735 0.952 - - - - - - 0.952 - -
88. DHRS2 DHRS2 585 0.952 - - - - - - 0.952 - -
89. snrpd1 ENSDARG00000011648 8615 0.952 - - - - - - 0.952 - - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
90. papolg ENSDARG00000012141 1445 0.952 - - - - - - 0.952 - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
91. prpf39 ENSDARG00000100209 3721 0.952 - - - - - - 0.952 - - PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
92. armc1l ENSDARG00000020887 1219 0.952 - - - - - - 0.952 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
93. kif2c ENSDARG00000076228 2281 0.952 - - - - - - 0.952 - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
94. prkaa1 ENSDARG00000060596 1448 0.952 - - - - - - 0.952 - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030325-1]
95. yy1b ENSDARG00000027978 2669 0.952 - - - - - - 0.952 - - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
96. prim1 ENSDARG00000040163 909 0.951 - - - - - - 0.951 - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
97. pgam1a ENSDARG00000005423 3986 0.951 - - - - - - 0.951 - - phosphoglycerate mutase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1827]
98. rpl7a ENSDARG00000019230 1204 0.951 - - - - - - 0.951 - - ribosomal protein L7a [Source:ZFIN;Acc:ZDB-GENE-031001-9]
99. rybpb ENSDARG00000053459 1464 0.951 - - - - - - 0.951 - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
100. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 0.951 - - - - - - 0.951 - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]

There are 1126 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA