Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ccdc85ca

Gene Name Gene ID Reads Annotation
ccdc85ca ENSDARG00000005232 3218 coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]










Genes with expression patterns similar to ccdc85ca

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc85ca ENSDARG00000005232 3218 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
2. spock3 ENSDARG00000070266, ENSDARG00000110158 934 3.15 0.762 0.767 - - - 0.801 0.820 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
3. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.574 0.795 - 0.921 - - 0.858 - - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
4. rnd1l rnd1l 984 2.503 0.789 - 0.959 - - 0.755 - - -
5. nes ENSDARG00000088805 2710 2.488 0.806 - 0.889 - - 0.793 - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
6. dnajc5aa ENSDARG00000042948 2885 2.469 0.813 - 0.930 - - 0.726 - - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
7. TUBB8P7_1 TUBB8P7_1 2722 2.452 0.804 - 0.944 - - 0.704 - - -
8. hes6 ENSDARG00000019335 4754 2.448 0.706 - 0.939 - - 0.803 - - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
9. pou3f3a ENSDARG00000042032 2835 2.433 0.773 - 0.923 - - 0.737 - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
10. hmgb3a ENSDARG00000056725 15668 2.421 0.829 - - - - 0.855 0.737 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
11. setdb1b ENSDARG00000099021 2937 2.375 0.714 - 0.932 - - 0.729 - - - SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
12. ssbp4 ENSDARG00000056483 10196 2.358 - - 0.894 - - 0.702 0.762 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
13. plp1a ENSDARG00000103732 3544 2.346 0.807 - - - - 0.770 - 0.769 - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
14. cd99l2 ENSDARG00000056722 5036 2.293 0.762 - - - - 0.791 0.740 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
15. hnrnpub ENSDARG00000004735 16496 2.291 0.787 - - - - 0.802 0.702 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
16. cdca5 ENSDARG00000044437 2041 2.281 0.801 0.776 - - - - - - 0.704 cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
17. ptbp2b ENSDARG00000015901 2458 2.227 - 0.718 - - - 0.748 - 0.761 - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
18. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.176 0.722 - - - - 0.732 0.722 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
19. hoxb2a ENSDARG00000000175 1122 1.78 - - 0.946 - - - 0.834 - - homeobox B2a [Source:ZFIN;Acc:ZDB-GENE-990415-103]
20. phf10 ENSDARG00000070084 1210 1.778 - - 0.947 - - - 0.831 - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
21. reep5 ENSDARG00000100742 1470 1.751 - 0.820 0.931 - - - - - - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
22. ncoa4 ENSDARG00000021439 4581 1.748 - 0.814 0.934 - - - - - - nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
23. sipa1l2 ENSDARG00000061640 4545 1.741 - - 0.928 - - 0.813 - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
24. pola2 ENSDARG00000015070 2286 1.73 0.764 - 0.966 - - - - - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
25. zswim5 ENSDARG00000055900 4243 1.728 - - 0.882 - - 0.846 - - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
26. fmnl2b ENSDARG00000075041 1744 1.728 - - 0.948 - - 0.780 - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
27. hoxa9b ENSDARG00000056819 3081 1.723 0.814 - - - - 0.909 - - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
28. twf1a ENSDARG00000115712 3465 1.716 - 0.787 0.929 - - - - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
29. kdm5c ENSDARG00000006124 4389 1.712 - - 0.879 - - 0.833 - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
30. stxbp1a ENSDARG00000001994 5154 1.708 - - 0.934 - - 0.774 - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
31. ARHGAP22 ENSDARG00000076434 1406 1.706 - - 0.951 - - 0.755 - - - Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
32. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.701 - - 0.879 - - 0.822 - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
33. MDC1 ENSDARG00000086764 1851 1.693 0.754 - 0.939 - - - - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
34. tial1 ENSDARG00000009525 1856 1.691 - 0.722 0.969 - - - - - - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
35. nusap1 ENSDARG00000002403 6953 1.688 - - 0.823 - - 0.865 - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
36. PCBP4 ENSDARG00000024276 3194 1.686 0.738 - 0.948 - - - - - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
37. hmgb1b ENSDARG00000030479 10398 1.684 0.858 - - - - 0.826 - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
38. UTP20 ENSDARG00000099280 1672 1.682 - 0.741 0.941 - - - - - - UTP20 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-080225-38]
39. khsrp ENSDARG00000026489 15738 1.682 0.762 - - - - 0.920 - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
40. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.68 - - 0.937 - - - 0.743 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
41. yjefn3 ENSDARG00000061692 211 1.672 - - - - - 0.777 0.895 - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
42. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.672 - - 0.842 - - - 0.830 - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
43. rad18 ENSDARG00000027938 574 1.665 0.711 - 0.954 - - - - - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
44. clstn1 ENSDARG00000031720 5286 1.663 0.768 - 0.895 - - - - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
45. sema6a ENSDARG00000102165 1401 1.662 - - 0.943 - - 0.719 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
46. dscr3 1229 1.66 - - 0.949 0.711 - - - - - Down syndrome critical region 3
47. rybpb ENSDARG00000053459 1464 1.659 - - 0.935 - - 0.724 - - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
48. rbm25 rbm25 3629 1.659 - - 0.913 - - 0.746 - - -
49. fam60al 2846 1.657 0.797 - - - - 0.860 - - - family with sequence similarity 60, member A, like
50. hsbp1a ENSDARG00000069425 1086 1.653 0.707 - 0.946 - - - - - - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
51. nr2f1a ENSDARG00000052695 5037 1.644 - - 0.884 - - 0.760 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
52. npm1b ENSDARG00000037675 5448 1.644 0.802 - - - - 0.842 - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
53. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.644 - - - - - 0.816 0.828 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
54. gfap ENSDARG00000025301 5584 1.641 0.828 - - - - 0.813 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
55. cpsf1 ENSDARG00000034178 2036 1.64 - - 0.939 - - 0.701 - - - cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
56. ndc80 ENSDARG00000071694 1162 1.639 - - 0.935 - - - - 0.704 - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
57. lfng ENSDARG00000037879 11783 1.636 0.781 - - - - 0.855 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
58. rnf121 ENSDARG00000060282 1809 1.634 - 0.723 0.911 - - - - - - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
59. SERBP1 SERBP1 9276 1.633 - - 0.811 - - 0.822 - - -
60. rtf1 ENSDARG00000008947 6596 1.627 0.784 - 0.843 - - - - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
61. tuba1c ENSDARG00000055216 8384 1.626 0.851 - - - - 0.775 - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
62. cand1 ENSDARG00000017841 8164 1.626 - - 0.828 - - 0.798 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
63. nova2 ENSDARG00000017673 7685 1.622 0.834 - - - - 0.788 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
64. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.617 0.834 - - - - 0.783 - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
65. cars ENSDARG00000036164 2019 1.614 - - 0.910 - - - 0.704 - - cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
66. PRTG PRTG 4714 1.614 0.833 - - - - 0.781 - - -
67. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.606 0.814 - - - - 0.792 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
68. lypla2 ENSDARG00000053656 8971 1.605 - - 0.848 - - 0.757 - - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
69. TNRC6C_1 TNRC6C_1 6574 1.604 - - 0.845 - - 0.759 - - -
70. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 1.599 - - - - - 0.774 0.825 - - NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
71. vim ENSDARG00000010008 3551 1.599 0.777 - - - - 0.822 - - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
72. shfm1 7620 1.599 - - 0.841 - - 0.758 - - - split hand/foot malformation (ectrodactyly) type 1
73. vdac1 ENSDARG00000045132 8051 1.597 0.806 - - - - 0.791 - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
74. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 1.588 0.774 - - - - 0.814 - - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
75. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.587 0.760 - 0.827 - - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
76. epha4b ENSDARG00000011600 3110 1.585 0.836 - - - - 0.749 - - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
77. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.584 0.808 - - - - 0.776 - - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
78. CYTH2 ENSDARG00000028800 2349 1.582 - 0.809 - - - 0.773 - - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
79. AGO1 ENSDARG00000092644 4521 1.581 0.794 - - - - 0.787 - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
80. nadl1.1 1200 1.578 0.806 - - - - 0.772 - - - neural adhesion molecule L1.1, transcript variant X1
81. vamp1 ENSDARG00000031283 3094 1.578 0.827 - - - - 0.751 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
82. ddx39ab ENSDARG00000015111 11619 1.576 - - 0.772 - - 0.804 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
83. rbfox1 ENSDARG00000014746 2808 1.575 0.778 - - - - 0.797 - - - RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]
84. api5 ENSDARG00000033597 6655 1.574 - - - - - 0.821 0.753 - - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
85. msi1 ENSDARG00000010710 2634 1.573 - - - - - 0.792 - 0.781 - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
86. hoxd3a ENSDARG00000059280 1919 1.572 0.709 - - - - 0.863 - - - homeobox D3a [Source:ZFIN;Acc:ZDB-GENE-990415-120]
87. nrarpb ENSDARG00000018958 6225 1.571 0.770 - - - - 0.801 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
88. prrt1 ENSDARG00000062208 368 1.57 0.765 - - - - 0.805 - - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
89. EFCC1 ENSDARG00000077826 1359 1.57 0.805 - - - - 0.765 - - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
90. fkbp4 ENSDARG00000008447 3736 1.57 0.733 0.837 - - - - - - - FK506 binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-514]
91. irx3a ENSDARG00000101076 3106 1.568 0.804 - - - - - - - 0.764 iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
92. bri3bp ENSDARG00000010108 6295 1.567 - - - - - 0.829 0.738 - - bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
93. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.566 0.755 - - - - 0.811 - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
94. slc18a3a ENSDARG00000006356 1285 1.565 0.745 - - - - 0.820 - - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
95. atp2b4 5891 1.564 - - 0.830 - - 0.734 - - - ATPase, Ca++ transporting, plasma membrane 4
96. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.563 0.755 - - - - 0.808 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
97. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.563 - - 0.809 - - 0.754 - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
98. hoxc6a ENSDARG00000070343 2839 1.561 - 0.760 - - - 0.801 - - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
99. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.559 0.761 - - - - 0.798 - - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
100. UBE2QL1 ENSDARG00000079276 3474 1.559 0.779 - - - - 0.780 - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]

There are 1463 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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