Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccdc58

Gene Name Gene ID Reads Annotation
ccdc58 ENSDARG00000045351 972 coiled-coil domain containing 58 [Source:ZFIN;Acc:ZDB-GENE-040426-1780]










Genes with expression patterns similar to ccdc58

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc58 ENSDARG00000045351 972 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 58 [Source:ZFIN;Acc:ZDB-GENE-040426-1780]
2. grsf1 ENSDARG00000053021 2752 2.364 - 0.806 - - - 0.767 0.791 - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
3. lpl ENSDARG00000087697 2578 2.306 - 0.792 - - - 0.807 0.707 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
4. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 2.28 0.782 - - - - 0.756 0.742 - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
5. DNAJA4 ENSDARG00000051762 5657 2.193 - 0.717 - - - 0.735 0.741 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
6. tomm34 ENSDARG00000001557 1874 1.725 - - - - - 0.825 0.900 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
7. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.677 0.832 - - - - - 0.845 - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
8. lims2 ENSDARG00000014976 1248 1.674 - - - - - 0.891 0.783 - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
9. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.673 - - - - - 0.795 0.878 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
10. zgc:92518 ENSDARG00000016343 3837 1.665 - - - - - 0.865 0.800 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
11. tgm2a ENSDARG00000070157 4516 1.66 - - - - - 0.892 0.768 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
12. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 1.655 - - - - - 0.874 0.781 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
13. ndufs6 ENSDARG00000056583 7220 1.651 - - - - - 0.818 0.833 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
14. nid1a ENSDARG00000068710 3948 1.648 - - - - - 0.844 0.804 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
15. myom1a ENSDARG00000061249 10230 1.644 - - - - - 0.875 0.769 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
16. klhl41b ENSDARG00000006757 10762 1.627 - - - - - 0.845 0.782 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
17. ATP5J_2 ATP5J_2 2381 1.627 - - - - - 0.799 0.828 - -
18. myod1 ENSDARG00000030110 6019 1.621 - - - - - 0.832 0.789 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
19. flncb ENSDARG00000018820 5595 1.614 - - - - - 0.854 0.760 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
20. tnnt2e ENSDARG00000045822, ENSDARG00000109924 3288 1.611 - - - - - 0.845 0.766 - - troponin T2e, cardiac [Source:ZFIN;Acc:ZDB-GENE-041210-27]
21. CR847973.1 ENSDARG00000115516 8754 1.601 - 0.775 - - - 0.826 - - -
22. pycr1 pycr1 1258 1.595 0.800 - - - - - - 0.795 -
23. mrto4 ENSDARG00000007130 1086 1.589 - 0.823 - - - 0.766 - - - MRT4 homolog, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-050417-142]
24. THOP1 ENSDARG00000013776 2717 1.589 - 0.729 - - - - 0.860 - - thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
25. bmpr1bb ENSDARG00000102742 1036 1.587 - - - - - 0.776 0.811 - - bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
26. cyr61 ENSDARG00000023062 1213 1.585 - 0.740 - - - - - 0.845 - cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
27. pvrl3l pvrl3l 943 1.58 0.802 - - - - 0.778 - - -
28. tmem182 tmem182 12589 1.576 - - - - - 0.816 0.760 - -
29. FHOD3_1 FHOD3_1 983 1.573 - - - - - 0.872 0.701 - -
30. stac3 ENSDARG00000098883 1765 1.569 - - - - - 0.770 0.799 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
31. lgals2a ENSDARG00000054942 888 1.567 - - - - - 0.743 0.824 - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
32. chchd3 chchd3 4139 1.562 - - - - - 0.797 0.765 - -
33. gmpr ENSDARG00000016160 1537 1.561 - - - - - 0.830 0.731 - - guanosine monophosphate reductase [Source:ZFIN;Acc:ZDB-GENE-050522-48]
34. C11H19orf25 C11H19orf25 491 1.555 0.800 - - - - - - 0.755 -
35. gars ENSDARG00000059070 17015 1.555 - - - - - 0.738 0.817 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
36. tcp11l2 ENSDARG00000027316 1906 1.553 0.794 - - - - - 0.759 - - t-complex 11, testis-specific-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1956]
37. trim25l ENSDARG00000020863 292 1.551 0.805 - - - - - - 0.746 - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
38. fam208b ENSDARG00000074168 2244 1.551 0.814 - - - - - 0.737 - - family with sequence similarity 208, member B [Source:ZFIN;Acc:ZDB-GENE-041111-225]
39. psma8 ENSDARG00000010965 8321 1.55 0.804 - - - - 0.746 - - - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
40. acsl1 acsl1 4216 1.544 - - - - - 0.786 0.758 - -
41. nexn ENSDARG00000057317 10972 1.541 - - - - - 0.794 0.747 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
42. MRPL52 ENSDARG00000090568 4402 1.539 0.821 - - - - - 0.718 - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
43. slc16a3 ENSDARG00000045051 818 1.536 - - - - - 0.813 0.723 - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
44. fgfr1op2 ENSDARG00000009657 904 1.535 - 0.794 - - - 0.741 - - - FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
45. smtnl1 ENSDARG00000041257 7410 1.534 - - - - - 0.823 0.711 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
46. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.532 - - - - - 0.801 0.731 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
47. grem2 grem2 743 1.532 - - - - - 0.731 0.801 - -
48. hsp90aa1.1 ENSDARG00000010478 47784 1.529 - - - - - 0.749 0.780 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
49. chrna1 ENSDARG00000009021 2931 1.529 - - - - - 0.790 0.739 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
50. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.528 - - - - - 0.774 0.754 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
51. gypc ENSDARG00000041546 1487 1.522 - - - - - 0.735 0.787 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
52. celf1 ENSDARG00000005315 5598 1.521 - 0.806 - - - 0.715 - - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
53. ckmt2 ckmt2 768 1.521 - - - - - 0.743 0.778 - -
54. NRAP ENSDARG00000009341 3565 1.52 - - - - - 0.767 0.753 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
55. si:ch211-255p10.3 ENSDARG00000096616 8336 1.513 - - - - - 0.790 0.723 - - si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
56. CR392006.1 CR392006.1 1401 1.51 - - - - - 0.776 0.734 - -
57. znf106a ENSDARG00000016651 6049 1.509 - 0.770 - - - - 0.739 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
58. rp42-pen rp42-pen 3395 1.508 - - - - - 0.749 0.759 - -
59. CRAT CRAT 521 1.508 - - - - - 0.771 0.737 - -
60. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 1.505 - 0.801 - - - - 0.704 - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
61. smyd1a ENSDARG00000009280 1503 1.504 - - - - - 0.784 0.720 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
62. BX248510.1 ENSDARG00000075422 1449 1.503 - - - - - 0.786 0.717 - - mitochondrial ribosomal protein L49 [Source:NCBI gene;Acc:558658]
63. mrps9 ENSDARG00000061505 1636 1.503 - - - - - 0.764 0.739 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
64. ppp1r3cb ENSDARG00000014554 2507 1.501 - 0.739 - - - - 0.762 - - protein phosphatase 1, regulatory subunit 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1733]
65. gar1 ENSDARG00000076526, ENSDARG00000116188 3408 1.498 0.730 - - - - - 0.768 - - GAR1 homolog, ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-040426-893]
66. cyc1 ENSDARG00000038075 16699 1.496 - - - - - 0.774 0.722 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
67. ppapdc3 ppapdc3 4924 1.496 - - - - - 0.789 0.707 - -
68. TENC1 TENC1 1729 1.496 - - - - - 0.784 0.712 - -
69. rtn4ip1 ENSDARG00000031366 388 1.492 - - - - - 0.760 0.732 - - reticulon 4 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1314]
70. tnnt2d ENSDARG00000002988 7590 1.492 - - - - - 0.765 0.727 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
71. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.49 - - - - - 0.732 0.758 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
72. cmss1 ENSDARG00000004727, ENSDARG00000112579 830 1.49 - 0.732 - - - - 0.758 - - cms1 ribosomal small subunit homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041010-146]
73. cacna1sa ENSDARG00000029457 883 1.488 - - - - - 0.732 0.756 - - calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]
74. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 1.486 - - - - - 0.728 0.758 - - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
75. si:ch211-120j21.1 si:ch211-120j21.1 638 1.486 0.726 - - - - - 0.760 - -
76. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 1.485 0.763 0.722 - - - - - - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
77. jph2 ENSDARG00000028625 6706 1.485 - - - - - 0.765 0.720 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
78. lrig1 ENSDARG00000075625 2027 1.484 - - - - - 0.742 0.742 - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
79. klhl40a ENSDARG00000039052 2537 1.483 - - - - - 0.760 0.723 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
80. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.482 - - - - - 0.767 0.715 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
81. tspan12 ENSDARG00000032389 419 1.482 - - - - - 0.705 0.777 - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
82. trim55a ENSDARG00000029596 2858 1.479 - 0.732 - - - - 0.747 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
83. zgc:158296 ENSDARG00000070923 3935 1.478 - - - - - 0.707 0.771 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
84. tnnc1b ENSDARG00000037539 13945 1.477 - - - - - 0.740 0.737 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
85. hadhab ENSDARG00000060594 3664 1.477 0.732 - - - - - 0.745 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
86. sptb ENSDARG00000030490 7128 1.474 - - - - - 0.745 0.729 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
87. MYOT ENSDARG00000076312 1791 1.473 - - - - - 0.728 0.745 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
88. immt ENSDARG00000102874 3435 1.473 - - - - - 0.727 0.746 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
89. PTPLA PTPLA 4044 1.471 - - - - - 0.754 0.717 - -
90. glipr2l ENSDARG00000016837 440 1.47 0.763 0.707 - - - - - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
91. AL929007.1 AL929007.1 3649 1.47 - 0.745 - - - 0.725 - - -
92. mir133b_1 671 1.47 - 0.701 - - - - 0.769 - - microRNA 133b
93. zgc:92113 1738 1.467 - - - - - 0.718 0.749 - - zgc:92113
94. lipg ENSDARG00000031044 1516 1.462 - 0.730 - - - 0.732 - - - lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]
95. ALDH1L2 ENSDARG00000070230 2550 1.457 - - - - - 0.722 0.735 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
96. thop1 ENSDARG00000013776 279 1.456 - - - - - 0.708 0.748 - - thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
97. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.455 - - - - - 0.726 0.729 - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
98. BX664721.5 BX664721.5 462 1.452 - 0.745 - - - - 0.707 - -
99. eno3 ENSDARG00000039007 11355 1.451 - 0.729 - - - - 0.722 - - enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
100. PTGES3L PTGES3L 4801 1.451 - - - - - 0.729 0.722 - -

There are 1075 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA