Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cbx4

Gene Name Gene ID Reads Annotation
cbx4 ENSDARG00000099441 372 chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]










Genes with expression patterns similar to cbx4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cbx4 ENSDARG00000099441 372 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
2. TTF1_5 TTF1_5 705 1.861 - - - 0.887 0.974 - - - -
3. tp53rk ENSDARG00000112667 806 1.839 - - - - 0.936 - 0.903 - - TP53 regulating kinase [Source:ZFIN;Acc:ZDB-GENE-050522-123]
4. usp44 ENSDARG00000089861 1532 1.814 - 0.896 - - 0.918 - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
5. bbs4 ENSDARG00000063522 247 1.802 - - - 0.948 - - 0.854 - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
6. ddx27 ENSDARG00000091831 1471 1.796 - - - 0.875 0.921 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
7. mgll ENSDARG00000036820 747 1.796 - - - 0.850 0.946 - - - - monoglyceride lipase [Source:ZFIN;Acc:ZDB-GENE-031006-9]
8. crp4 714 1.79 - - - 0.858 0.932 - - - - C-reactive protein 4
9. usp49 ENSDARG00000000229 706 1.767 - - - 0.816 0.951 - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
10. cxxc1 cxxc1 914 1.757 - - - 0.796 0.961 - - - -
11. fam13a ENSDARG00000075564 1905 1.746 - 0.824 - - 0.922 - - - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
12. MON1B_1 MON1B_1 697 1.745 - - - - 0.959 - 0.786 - -
13. C2H1orf35 C2H1orf35 652 1.743 - - - 0.792 0.951 - - - -
14. SUOX ENSDARG00000091574 122 1.725 - - - - - 0.785 0.940 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
15. sin3ab ENSDARG00000059812 2140 1.721 - - - 0.802 0.919 - - - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
16. prr11 ENSDARG00000087393 677 1.721 - - - 0.793 0.928 - - - - proline rich 11 [Source:ZFIN;Acc:ZDB-GENE-091118-97]
17. chrac1 ENSDARG00000042337 2590 1.716 - - - 0.847 - - 0.869 - - chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
18. thoc3 ENSDARG00000056517 909 1.715 - 0.827 - - 0.888 - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
19. dnajc18 ENSDARG00000056005 8084 1.715 - - - 0.839 0.876 - - - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
20. dnph1 ENSDARG00000075730 403 1.714 - 0.847 - - - - 0.867 - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
21. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.708 - - - 0.803 0.905 - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
22. mycla ENSDARG00000006003 1866 1.695 - 0.729 - - 0.966 - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
23. sult6b1 ENSDARG00000086826 2070 1.687 - - - - 0.925 - 0.762 - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
24. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.683 - - - 0.775 0.908 - - - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
25. alg10 ENSDARG00000053917 491 1.672 - - - - 0.969 - 0.703 - - asparagine-linked glycosylation 10 [Source:ZFIN;Acc:ZDB-GENE-110310-8]
26. mlec ENSDARG00000059630 2057 1.667 - - - - 0.858 - 0.809 - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
27. ikbkg ENSDARG00000017037 1225 1.666 - - - 0.746 0.920 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma [Source:ZFIN;Acc:ZDB-GENE-050327-68]
28. rspry1 ENSDARG00000062558 1424 1.66 - - - - 0.899 - 0.761 - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
29. dcaf12 ENSDARG00000063155 697 1.655 - - - 0.807 - - 0.848 - - DDB1 and CUL4 associated factor 12 [Source:ZFIN;Acc:ZDB-GENE-061013-363]
30. paf1 ENSDARG00000098432 1806 1.652 - - - - 0.938 - 0.714 - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
31. nup210 ENSDARG00000063333 995 1.651 - - - 0.724 0.927 - - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
32. dnajc5ab ENSDARG00000004836 2923 1.65 - - - 0.835 - - 0.815 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
33. tmem229b ENSDARG00000060569 516 1.646 - 0.801 - 0.845 - - - - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
34. abca1a ENSDARG00000074635 1085 1.643 - - - 0.724 - - 0.919 - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
35. extl2 ENSDARG00000063191 118 1.643 - - - - - 0.715 0.928 - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
36. timm23 timm23 2712 1.64 - - - 0.871 - 0.769 - - -
37. ppig ENSDARG00000044431 3427 1.639 - - - 0.879 0.760 - - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
38. u2af2a ENSDARG00000012505 2920 1.639 - - - 0.821 - - 0.818 - - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
39. skia ENSDARG00000042151 1850 1.638 - - - - 0.936 - 0.702 - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
40. TPMT TPMT 138 1.63 - - - - - 0.740 0.890 - -
41. cenpi ENSDARG00000052565 482 1.623 - 0.719 - - - - 0.904 - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
42. dixdc1b ENSDARG00000056267 307 1.618 - 0.751 - 0.867 - - - - - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
43. brip1 ENSDARG00000074410, ENSDARG00000113993 501 1.613 - 0.770 - 0.843 - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
44. vps26b ENSDARG00000015823, ENSDARG00000116682 1023 1.608 - - - 0.858 - - 0.750 - - VPS26, retromer complex component B [Source:ZFIN;Acc:ZDB-GENE-040426-2699]
45. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.595 - - - 0.784 0.811 - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
46. fam8a1 fam8a1 561 1.594 0.838 - - - - - - - 0.756
47. ptpn23a ENSDARG00000070124 1206 1.592 - - - 0.827 - - 0.765 - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
48. inhbb ENSDARG00000040777 2141 1.592 - - - - 0.819 - 0.773 - - inhibin subunit beta B [Source:ZFIN;Acc:ZDB-GENE-990415-2]
49. CU570791.5 CU570791.5 872 1.589 - - - 0.821 - - 0.768 - -
50. DTX3 DTX3 303 1.587 0.706 - - 0.881 - - - - -
51. zwilch ENSDARG00000057100 408 1.586 - 0.793 - - - - 0.793 - - zwilch kinetochore protein [Source:ZFIN;Acc:ZDB-GENE-050420-101]
52. ITCH ITCH 1226 1.586 - - - 0.850 - - 0.736 - -
53. kctd12.2 ENSDARG00000053542, ENSDARG00000113200 2951 1.583 - - - 0.713 - - 0.870 - - potassium channel tetramerisation domain containing 12.2 [Source:ZFIN;Acc:ZDB-GENE-060117-4]
54. ift57 ENSDARG00000021022 288 1.582 0.708 - - - - - 0.874 - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
55. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.581 - - - 0.817 0.764 - - - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
56. hsdl1 ENSDARG00000041736 171 1.581 - 0.726 - - - - 0.855 - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
57. pigs ENSDARG00000017813 718 1.578 0.747 - - - - - 0.831 - - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
58. CU638740.1_1 CU638740.1_1 387 1.571 - - - 0.725 - - 0.846 - -
59. pnkd ENSDARG00000071032 447 1.57 - - - 0.801 - - 0.769 - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
60. IPO11 ENSDARG00000054224 616 1.569 - 0.826 - 0.743 - - - - - importin 11 [Source:ZFIN;Acc:ZDB-GENE-040711-1]
61. LPHN2 LPHN2 1971 1.56 - - - - 0.792 - 0.768 - -
62. zgc:66433 ENSDARG00000071697 688 1.556 - 0.849 - - - - 0.707 - - zgc:66433 [Source:ZFIN;Acc:ZDB-GENE-030131-9832]
63. CABZ01080568.2 CABZ01080568.2 2137 1.554 - - - 0.750 0.804 - - - -
64. Mar-02_1 Mar-02_1 146 1.547 0.728 - - - - - 0.819 - -
65. C15H11orf57 C15H11orf57 860 1.537 - - - 0.803 - - 0.734 - -
66. bscl2 ENSDARG00000037008 429 1.531 - 0.767 - - - - 0.764 - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
67. CABZ01115322.1 CABZ01115322.1 1283 1.531 - 0.726 - 0.805 - - - - -
68. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.531 - - - 0.769 0.762 - - - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
69. CR847496.2 ENSDARG00000116070 802 1.524 - 0.820 - 0.704 - - - - - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
70. ARHGEF5 2727 1.523 - - - 0.735 - - 0.788 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
71. taf1 ENSDARG00000035330 912 1.522 - 0.782 - 0.740 - - - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
72. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.52 - - - - 0.749 - 0.771 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
73. ndufaf4 ENSDARG00000077859 552 1.518 - - - 0.780 - 0.738 - - - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
74. DDX47_1 DDX47_1 453 1.515 - 0.792 - - - 0.723 - - -
75. irf5 ENSDARG00000045681 2594 1.514 - - - - - 0.708 0.806 - - interferon regulatory factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2587]
76. cwc25 ENSDARG00000003382 2134 1.51 - - - 0.792 - - 0.718 - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
77. elp5 ENSDARG00000067918 541 1.496 - 0.707 - - - - 0.789 - - elongator acetyltransferase complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-061215-33]
78. JHDM1D JHDM1D 2277 1.459 - 0.748 - - 0.711 - - - -
79. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.458 - 0.709 - - - - 0.749 - - Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
80. lpcat4 ENSDARG00000035028 167 1.438 - - - - - 0.725 0.713 - - lysophosphatidylcholine acyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5777]
81. CR855307.1 ENSDARG00000099628 338 1.437 - 0.725 - - - - - - 0.712
82. cdk7 ENSDARG00000051916 746 1.436 - 0.705 - - - - 0.731 - - cyclin-dependent kinase 7 [Source:ZFIN;Acc:ZDB-GENE-010320-2]
83. arl8ba ENSDARG00000006915 720 1.415 - 0.706 - - - - 0.709 - - ADP-ribosylation factor-like 8Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9370]
84. JPH3 ENSDARG00000102204 283 0.984 - - - - 0.984 - - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
85. si:dkey-20l4.2 si:dkey-20l4.2 110 0.979 - - - - 0.979 - - - -
86. si:dkeyp-106c3.1 ENSDARG00000090623 225 0.979 - - - - 0.979 - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
87. stub1 ENSDARG00000045228 105 0.979 - - - - 0.979 - - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
88. si:ch211-181p13.2 ENSDARG00000096484 94 0.978 - - - - 0.978 - - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
89. mis18a ENSDARG00000035333 555 0.978 - - - - 0.978 - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
90. anxa13l ENSDARG00000013613 631 0.978 - - - - 0.978 - - - - annexin A13, like [Source:ZFIN;Acc:ZDB-GENE-050522-310]
91. si:dkey-37o8.1 ENSDARG00000071727 64 0.978 - - - - 0.978 - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
92. ebp ENSDARG00000046098 502 0.977 - - - - 0.977 - - - - EBP, cholestenol delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-040718-12]
93. LRRC30 LRRC30 83 0.977 - - - - 0.977 - - - -
94. GRIN2B GRIN2B 140 0.977 - - - - 0.977 - - - -
95. rereb ENSDARG00000075670 136 0.977 - - - - 0.977 - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
96. zbtb20 ENSDARG00000005586 195 0.977 - - - - 0.977 - - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
97. pex12 ENSDARG00000035149 175 0.977 - - - - 0.977 - - - - peroxisomal biogenesis factor 12 [Source:ZFIN;Acc:ZDB-GENE-040426-929]
98. CR626962.1 ENSDARG00000096981 220 0.976 - - - - 0.976 - - - -
99. KEL ENSDARG00000076950 159 0.975 - - - - 0.975 - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
100. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 0.975 - - - - 0.975 - - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]

There are 1791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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