Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cbx1a

Gene Name Gene ID Reads Annotation
cbx1a ENSDARG00000004189, ENSDARG00000110945 3297 chromobox homolog 1a (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4945]










Genes with expression patterns similar to cbx1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cbx1a ENSDARG00000004189, ENSDARG00000110945 3297 8 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 chromobox homolog 1a (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4945]
2. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 2.241 - - - - - 0.716 0.765 - 0.760 polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
3. arglu1a ENSDARG00000019223 8716 2.222 - - - - - 0.734 0.730 - 0.758 arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
4. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 2.193 - - - 0.726 - - 0.732 0.735 - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
5. scoca ENSDARG00000087333 1739 1.676 - - - - - 0.808 - - 0.868 short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
6. sel1l ENSDARG00000004581 2246 1.661 - - - - - 0.839 - - 0.822 SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
7. polr2j ENSDARG00000035146 1493 1.622 - 0.742 - - - - - - 0.880 polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
8. gipc1 ENSDARG00000104483 2913 1.622 - - - 0.751 - - - - 0.871 GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
9. pcbp2 ENSDARG00000099039 4248 1.616 - 0.775 - - - - - - 0.841 poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
10. gemin8 ENSDARG00000053496, ENSDARG00000115240 1214 1.616 - 0.829 - - - - - - 0.787 gem (nuclear organelle) associated protein 8 [Source:ZFIN;Acc:ZDB-GENE-041114-189]
11. cdc20 ENSDARG00000100741 3264 1.611 - - - 0.716 - - - - 0.895 cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
12. ttc3 ENSDARG00000086075 2157 1.608 - - - - - - 0.760 - 0.848 tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
13. ap2b1 ENSDARG00000035152 2912 1.602 - - - - - 0.703 - - 0.899 adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
14. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.597 - - - - - - 0.719 - 0.878 mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
15. dgcr2 ENSDARG00000042962, ENSDARG00000109230 2339 1.594 - - - - - - 0.731 - 0.863 DiGeorge syndrome critical region gene 2 [Source:ZFIN;Acc:ZDB-GENE-040718-404]
16. AL929222.1 ENSDARG00000096994 1293 1.593 - 0.745 - - - - - - 0.848
17. cdipt ENSDARG00000070686 1318 1.581 - - - - - 0.750 - - 0.831 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
18. ube2nb ENSDARG00000045877 4583 1.579 - - - - - 0.797 0.782 - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
19. DALRD3 ENSDARG00000068602 3062 1.579 - - - - - - 0.726 - 0.853 DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
20. eci1 ENSDARG00000018002 2141 1.576 - 0.725 - - - - - - 0.851 enoyl-CoA delta isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6033]
21. mpzl1l ENSDARG00000059048 571 1.568 - 0.786 - - - 0.782 - - - myelin protein zero-like 1 like [Source:ZFIN;Acc:ZDB-GENE-050417-455]
22. rbfox2 ENSDARG00000052182 6621 1.555 - 0.804 - - - - - - 0.751 RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
23. cetn4 ENSDARG00000041215 898 1.551 - - - - - - 0.733 - 0.818 centrin 4 [Source:ZFIN;Acc:ZDB-GENE-030826-21]
24. qars ENSDARG00000010316 2715 1.545 - - - - - - 0.718 - 0.827 glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
25. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.544 - - - - - 0.766 - 0.778 - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
26. GABARAP GABARAP 8341 1.532 - - - - - - 0.730 - 0.802
27. EIF4G1_1 EIF4G1_1 3721 1.528 - 0.729 - - - - - - 0.799
28. rerea ENSDARG00000077353 4162 1.525 - - - - - 0.774 0.751 - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
29. kdrl ENSDARG00000105215 766 1.522 - 0.709 - - - - - - 0.813 kinase insert domain receptor like [Source:ZFIN;Acc:ZDB-GENE-000705-1]
30. si:dkeyp-113d7.10 ENSDARG00000092359 1585 1.512 - 0.776 - - - - - 0.736 - si:dkeyp-113d7.10 [Source:ZFIN;Acc:ZDB-GENE-061207-80]
31. Sep-02 Sep-02 10074 1.503 - - - - - 0.752 0.751 - -
32. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.502 - 0.756 - - - 0.746 - - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
33. chd9 ENSDARG00000074498, ENSDARG00000112964 2603 1.5 - - - - - - 0.775 0.725 - chromodomain helicase DNA binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-497]
34. lsm14aa ENSDARG00000006600 2298 1.499 - - - - - - 0.749 0.750 - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
35. uba2 ENSDARG00000101332, ENSDARG00000115924 1066 1.498 - 0.753 - - - - - 0.745 - ubiquitin-like modifier activating enzyme 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2681]
36. wdfy1 ENSDARG00000005425 3628 1.493 - - - - - - 0.707 0.786 - WD repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041024-4]
37. nutf2l ENSDARG00000014499 3927 1.489 - - - - - - 0.726 - 0.763 nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
38. golga7 ENSDARG00000057676 4691 1.487 - - - - - 0.722 0.765 - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
39. hnrnpua ENSDARG00000015206 4012 1.483 - 0.766 - 0.717 - - - - - heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
40. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.481 0.709 - - - - - 0.772 - - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
41. prp19 prp19 4804 1.471 - - - 0.720 - 0.751 - - -
42. ppp4r2a ENSDARG00000026540 1782 1.468 - 0.765 - - - - - 0.703 - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
43. fbxl14b ENSDARG00000045801 965 1.462 - 0.722 - - - - 0.740 - - F-box and leucine-rich repeat protein 14b [Source:ZFIN;Acc:ZDB-GENE-030131-3556]
44. dynll2b ENSDARG00000005172 935 1.457 - - - - - 0.703 0.754 - - dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:ZDB-GENE-050320-132]
45. ppap2b ppap2b 2900 1.455 - - - - - - 0.748 - 0.707
46. sav1 ENSDARG00000006196 1201 1.455 - 0.704 - - - - 0.751 - - salvador family WW domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-040912-28]
47. ldb1a ENSDARG00000010137 3035 1.454 - - - - - 0.738 0.716 - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
48. cwc27 ENSDARG00000043727 690 1.443 - 0.711 - - - - 0.732 - - CWC27 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1118]
49. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.44 - - - - - 0.718 0.722 - - transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
50. abi2b ENSDARG00000014875 2259 1.436 - - - 0.706 - - 0.730 - - abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
51. mta2 ENSDARG00000013031 2932 1.436 - - - 0.734 - - - 0.702 - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
52. ttk ENSDARG00000041361 3911 1.427 - - - 0.703 - - 0.724 - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
53. cpsf3 ENSDARG00000027649 6897 1.423 - - - - - 0.705 0.718 - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
54. ppp4r2b ENSDARG00000053447 2506 1.411 - - - - - 0.702 - 0.709 - protein phosphatase 4, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3008]
55. cpne1 ENSDARG00000075536 4063 1.411 - - - - - - 0.708 - 0.703 copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
56. cadm1a ENSDARG00000031075 2484 1.405 0.704 - - 0.701 - - - - - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
57. psmc1b ENSDARG00000043561, ENSDARG00000112404 2148 0.907 - 0.907 - - - - - - - proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc:ZDB-GENE-040625-69]
58. polr3k ENSDARG00000037835 1552 0.902 - 0.902 - - - - - - - polymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
59. pip5k2 pip5k2 5743 0.9 - - - - - - 0.900 - -
60. thoc7 ENSDARG00000015394 3824 0.899 - - - - - - - - 0.899 THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
61. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 0.892 - - - - - - - - 0.892 hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
62. map3k7 ENSDARG00000020469 2845 0.889 - - - - - - - - 0.889 mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
63. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 0.889 - - - - - - - - 0.889 interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
64. pik3ip1 ENSDARG00000003281 339 0.888 - 0.888 - - - - - - - phosphoinositide-3-kinase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-031030-14]
65. rapgef2 ENSDARG00000005482 2586 0.887 - - - - - - - - 0.887 Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
66. pank1b ENSDARG00000010098 3202 0.885 - - - - - - - - 0.885 pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
67. stk35l ENSDARG00000057497 3582 0.884 - - - - - - - - 0.884 serine/threonine kinase 35, like [Source:ZFIN;Acc:ZDB-GENE-041212-52]
68. ss18 ENSDARG00000002970 2618 0.884 - - - - - - - - 0.884 synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
69. taf13 ENSDARG00000070834, ENSDARG00000109314 1982 0.883 - - - - - - - - 0.883 TATA-box binding protein associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2873]
70. nfe2l3 ENSDARG00000019810 3682 0.883 - - - - - - - - 0.883 nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
71. kidins220b ENSDARG00000017338 1937 0.882 - - - - - - - - 0.882 kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
72. dag1 ENSDARG00000016153 10886 0.881 - - - - - - - - 0.881 dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
73. srfbp1 ENSDARG00000075323 2262 0.879 - - - - - - - - 0.879 serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
74. wu:fb54a03 wu:fb54a03 1722 0.877 - - - - - - - - 0.877
75. pcnp ENSDARG00000037713 2754 0.877 - - - - - - - - 0.877 PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
76. otud5a ENSDARG00000059006 2073 0.876 - - - - - - - - 0.876 OTU deubiquitinase 5a [Source:ZFIN;Acc:ZDB-GENE-030616-61]
77. ptbp2a ENSDARG00000101947 1921 0.874 - - - - - - - - 0.874 polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
78. ppih ENSDARG00000041530 2085 0.87 - - - - - - - - 0.870 peptidylprolyl isomerase H (cyclophilin H) [Source:ZFIN;Acc:ZDB-GENE-040625-127]
79. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 0.87 - - - - - 0.870 - - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
80. bcl2l1 ENSDARG00000008434 1956 0.868 - - - - - - - - 0.868 bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
81. senp3b ENSDARG00000056741 1296 0.867 - - - - - - - - 0.867 SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
82. pmepa1 ENSDARG00000039325 652 0.867 - - - - - - - - 0.867 prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
83. ruvbl1 ENSDARG00000002591 2381 0.866 - - - - - - - - 0.866 RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
84. klf7a ENSDARG00000073857 1226 0.865 - - - - - - - - 0.865 Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
85. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 0.865 - - - - - - - - 0.865 eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
86. rpa2 ENSDARG00000037188 4284 0.864 - - - - - - - - 0.864 replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
87. xpot ENSDARG00000099652 3026 0.864 - - - - - - - - 0.864 exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
88. ist1 ENSDARG00000051888 4536 0.864 - - - - - - - - 0.864 increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
89. rhebl1 ENSDARG00000039162 3966 0.864 - - - - - - - - 0.864 Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
90. ctbp2 ctbp2 3255 0.863 - - - - - - - - 0.863
91. lin7c ENSDARG00000027322 3083 0.862 - - - - - - - - 0.862 lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
92. ptpn13 ENSDARG00000103699 2866 0.861 - - - - - 0.861 - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
93. gltscr2 gltscr2 5763 0.861 - - - - - - - - 0.861
94. rarga ENSDARG00000034117 1238 0.86 - - - - - - - - 0.860 retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
95. si:dkey-238g7.2 si:dkey-238g7.2 181 0.86 - 0.860 - - - - - - -
96. myeov2 3351 0.859 - - - - - - - - 0.859 myeloma overexpressed 2
97. col8a2 ENSDARG00000060893 504 0.858 - 0.858 - - - - - - - collagen, type VIII, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060503-488]
98. fam133b ENSDARG00000013863 5070 0.857 - - - - - - - - 0.857 family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
99. tmx4 ENSDARG00000101512 1379 0.857 - 0.857 - - - - - - - thioredoxin-related transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050706-155]
100. eif3ja ENSDARG00000012603 6324 0.856 - - - - - - - - 0.856 eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]

There are 947 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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