Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for casp7

Gene Name Gene ID Reads Annotation
casp7 ENSDARG00000091836 657 caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]










Genes with expression patterns similar to casp7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. casp7 ENSDARG00000091836 657 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
2. pitpnaa ENSDARG00000039490 1096 2.534 - 0.799 - - - - 0.874 0.861 - phosphatidylinositol transfer protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-744]
3. C20H6orf58_1 C20H6orf58_1 216 2.511 - 0.976 - - - 0.806 - 0.729 -
4. scamp2l ENSDARG00000017010 491 2.503 - 0.850 - - - - 0.902 - 0.751 secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
5. rac2 ENSDARG00000038010 5837 2.407 0.728 0.750 - - - - 0.929 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
6. ppp1r13l ENSDARG00000013777 2260 2.23 - 0.752 - - - 0.719 0.759 - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
7. zgc:194398 ENSDARG00000078250 815 2.2 0.736 - - - - 0.722 0.742 - - zgc:194398 [Source:ZFIN;Acc:ZDB-GENE-081022-111]
8. pak4 ENSDARG00000018110 1962 2.131 - 0.703 - - - 0.711 - 0.717 - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
9. bbs4 ENSDARG00000063522 247 1.864 - 0.990 - - - - 0.874 - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
10. TRIM35_10 TRIM35_10 484 1.849 - 0.986 - - - - 0.863 - -
11. ptgs2a ENSDARG00000004539 1207 1.832 - 0.865 - - - - 0.967 - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
12. ctdspla ENSDARG00000071673 1447 1.815 - 0.988 - - - - - 0.827 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
13. cnstb ENSDARG00000042759 105 1.808 - 0.990 - - - - 0.818 - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
14. lgalsla ENSDARG00000059060 512 1.803 - 0.954 - - - - 0.849 - - lectin, galactoside-binding-like a [Source:ZFIN;Acc:ZDB-GENE-060616-24]
15. nfyal ENSDARG00000001621 521 1.785 - 0.979 - - - - 0.806 - - nuclear transcription factor Y, alpha, like [Source:ZFIN;Acc:ZDB-GENE-040718-491]
16. NTAN1 ENSDARG00000105182 844 1.768 - 0.977 - - - - - 0.791 - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
17. si:dkey-261l7.2 ENSDARG00000094345 51 1.765 - 0.991 - - - - - - 0.774 si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
18. zbtb4 ENSDARG00000105255 362 1.763 - 0.974 - - - - 0.789 - - zinc finger and BTB domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-100318-5]
19. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.758 - 0.973 - - - 0.785 - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
20. CFP ENSDARG00000094451 852 1.757 - - - - - 0.877 0.880 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
21. aldh16a1 ENSDARG00000037935 617 1.754 - 0.951 - - - - 0.803 - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
22. azi1_1 azi1_1 1375 1.752 - 0.989 - - - - 0.763 - -
23. asmtl ENSDARG00000021433, ENSDARG00000114151 550 1.751 - 0.986 - - - 0.765 - - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
24. tmem161b ENSDARG00000055989 680 1.741 - 0.916 - - - - - 0.825 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
25. zfyve27 ENSDARG00000059835 604 1.741 - 0.894 - - - - 0.847 - - zinc finger, FYVE domain containing 27 [Source:ZFIN;Acc:ZDB-GENE-061013-502]
26. CLDN23 CLDN23 2002 1.74 - 0.819 - - - - 0.921 - -
27. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.725 - 0.991 - - - - - - 0.734 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
28. olfml3b ENSDARG00000062171 264 1.712 - 0.976 - - - - 0.736 - - olfactomedin-like 3b [Source:ZFIN;Acc:ZDB-GENE-050302-161]
29. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 1.709 - 0.980 - - - - - - 0.729 sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
30. mia2 ENSDARG00000099973 139 1.708 - 0.868 - - - - 0.840 - - MIA SH3 domain ER export factor 2 [Source:ZFIN;Acc:ZDB-GENE-100618-1]
31. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.705 - 0.831 - - - - 0.874 - - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
32. endog ENSDARG00000058865 679 1.702 - 0.946 - - - - - 0.756 - endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
33. klf15 ENSDARG00000091127 1037 1.694 - 0.879 - - - - - 0.815 - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
34. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 1.693 - 0.987 - - - - 0.706 - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
35. pvrl1b 1645 1.691 - 0.918 - - - - 0.773 - - poliovirus receptor-related 1b
36. pnpla7a ENSDARG00000062986 1793 1.686 - 0.968 - - - - 0.718 - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
37. zgc:113442 ENSDARG00000101906 3092 1.685 - 0.782 - - - - 0.903 - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
38. POLDIP3 ENSDARG00000099375 832 1.682 - 0.892 - - - - 0.790 - - polymerase (DNA-directed), delta interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-120201-2]
39. bnipl ENSDARG00000060435 1382 1.682 - - - - - 0.738 0.944 - - BCL2 interacting protein like [Source:ZFIN;Acc:ZDB-GENE-060503-81]
40. LRG1 LRG1 304 1.676 0.757 - - - - - 0.919 - -
41. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.673 - 0.898 - - - 0.775 - - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
42. si:ch73-73d17.3 si:ch73-73d17.3 925 1.669 - - - - - - 0.777 0.892 -
43. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.668 - 0.885 - - - - 0.783 - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
44. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.656 - 0.794 - - - - 0.862 - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
45. rps6ka3b ENSDARG00000057927, ENSDARG00000109970 812 1.656 - - - - - - 0.836 0.820 - ribosomal protein S6 kinase, polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-070209-74]
46. LIMD2 ENSDARG00000078092 3414 1.648 - 0.713 - - - - 0.935 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
47. mea1 ENSDARG00000039820 589 1.646 - - - - - - 0.791 0.855 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
48. cd2ap ENSDARG00000015224 2830 1.644 - - - - - 0.789 0.855 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
49. GIT1 ENSDARG00000039489 1157 1.643 - 0.914 - - - - 0.729 - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
50. si:dkey-8k3.2 ENSDARG00000038424 285 1.636 - - - - - - 0.788 0.848 - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
51. HYKK HYKK 261 1.634 - - - - - - 0.792 0.842 -
52. pltp ENSDARG00000104495 1037 1.633 - 0.894 - - - 0.739 - - - phospholipid transfer protein [Source:ZFIN;Acc:ZDB-GENE-040801-22]
53. rhov ENSDARG00000070434 808 1.631 - 0.803 - - - 0.828 - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
54. tmem238 tmem238 1403 1.618 - 0.730 - - - - 0.888 - -
55. ATOX1 ENSDARG00000087693 4016 1.613 0.773 0.840 - - - - - - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
56. adam9 ENSDARG00000010070 192 1.611 - - - - - - 0.819 0.792 - ADAM metallopeptidase domain 9 [Source:ZFIN;Acc:ZDB-GENE-040912-127]
57. commd1 ENSDARG00000031203 340 1.611 - - - - - - 0.732 0.879 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
58. MAP7 MAP7 98 1.61 - - - - - - - 0.863 0.747
59. sod3a ENSDARG00000070168 438 1.605 - 0.715 - - - - 0.890 - - superoxide dismutase 3, extracellular a [Source:ZFIN;Acc:ZDB-GENE-050309-208]
60. cyp2aa3 ENSDARG00000103347 880 1.601 - - - - - 0.853 0.748 - - cytochrome P450, family 2, subfamily AA, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-031030-8]
61. FAT2 ENSDARG00000018923 1088 1.6 - - - - - 0.721 0.879 - - FAT atypical cadherin 2 [Source:ZFIN;Acc:ZDB-GENE-111031-1]
62. arhgap11a ENSDARG00000100019 1642 1.598 - 0.855 - - - - 0.743 - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
63. fn1b ENSDARG00000006526 9542 1.595 - - - - - 0.732 0.863 - - fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
64. phip ENSDARG00000015970 1080 1.595 - 0.824 - - - - 0.771 - - pleckstrin homology domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-261]
65. ralgps2 ENSDARG00000026519 1610 1.593 - - - - - - 0.813 0.780 - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
66. zgc:109868 zgc:109868 7474 1.587 - - - - - 0.765 0.822 - -
67. casc3 ENSDARG00000029911 1174 1.586 - 0.877 - - - - 0.709 - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
68. CABZ01045212.1 ENSDARG00000087525 1460 1.586 - 0.843 - - - - 0.743 - - major facilitator superfamily domain-containing protein 8-like [Source:NCBI gene;Acc:564731]
69. si:ch211-179l5.5 si:ch211-179l5.5 249 1.584 - - - - - 0.735 0.849 - -
70. ugt5b2 ENSDARG00000101495 512 1.583 - 0.866 - - - - - 0.717 - UDP glucuronosyltransferase 5 family, polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-100406-4]
71. ube2g2 ENSDARG00000025404 1774 1.581 - 0.790 - - - - 0.791 - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
72. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 1.579 - 0.802 - - - 0.777 - - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
73. rpe65b ENSDARG00000094752, ENSDARG00000113621 463 1.578 - - - - - - 0.785 0.793 - retinal pigment epithelium-specific protein 65b [Source:ZFIN;Acc:ZDB-GENE-050410-16]
74. adam10a ENSDARG00000053468 9308 1.577 - 0.837 - - - - 0.740 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
75. CPAMD8 ENSDARG00000056530 3481 1.575 - 0.806 - - - - 0.769 - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
76. hoxd12a ENSDARG00000059263 795 1.575 - - - - - 0.753 - 0.822 - homeobox D12a [Source:ZFIN;Acc:ZDB-GENE-990415-118]
77. CR388068.1 CR388068.1 481 1.574 - - - - - - 0.802 - 0.772
78. EPT1 EPT1 1912 1.573 - 0.811 - - - - 0.762 - -
79. ak5l ENSDARG00000017739 1058 1.569 - - - - - - 0.849 0.720 - adenylate kinase 5, like [Source:ZFIN;Acc:ZDB-GENE-050410-2]
80. zgc:101663 ENSDARG00000037852 830 1.568 - - - - - 0.747 - 0.821 - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
81. ddx56 ENSDARG00000020913 1070 1.567 - 0.751 - - - - - 0.816 - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
82. ptgs2b ENSDARG00000010276 692 1.564 - - - - - - 0.753 - 0.811 prostaglandin-endoperoxide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-041014-323]
83. pon3 pon3 1146 1.558 - - - - - - 0.802 0.756 -
84. herpud1 ENSDARG00000024314 1207 1.548 - 0.795 - - - 0.753 - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
85. slc38a7 ENSDARG00000012002 2219 1.544 - - - - - 0.795 0.749 - - solute carrier family 38, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-266]
86. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.537 - 0.737 - - - - 0.800 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
87. gltpd1 gltpd1 377 1.534 - - - - - - 0.787 - 0.747
88. COX19 ENSDARG00000063882 419 1.532 - - - - - - 0.798 0.734 - cytochrome c oxidase assembly factor COX19 [Source:ZFIN;Acc:ZDB-GENE-070410-29]
89. he2 945 1.525 - 0.708 - - - - 0.817 - - hatching enzyme 2
90. C6H17orf67 C6H17orf67 687 1.523 0.799 - - - - 0.724 - - -
91. C22H6orf89 C22H6orf89 1076 1.515 - 0.745 - - - - - 0.770 -
92. si:ch211-130m23.2 ENSDARG00000095136 121 1.509 - - - - - - 0.783 - 0.726 si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
93. ces3 ENSDARG00000041595, ENSDARG00000114555 647 1.506 - - - - - 0.717 0.789 - - carboxylesterase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9563]
94. si:ch211-117m20.5 ENSDARG00000091996 7246 1.494 0.712 0.782 - - - - - - - si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
95. LGALS3BP LGALS3BP 51 1.489 - - - - - 0.724 0.765 - -
96. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.484 - - - - - - 0.742 - 0.742 asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
97. si:ch211-246m6.5 ENSDARG00000011673, ENSDARG00000103750 1081 1.484 0.702 - - - - - 0.782 - - si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]
98. ctps1a ENSDARG00000030700 3868 1.476 - - - - - 0.724 - 0.752 - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
99. mafbb ENSDARG00000070542, ENSDARG00000099120 1317 1.466 - - - - - 0.709 0.757 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Bb [Source:ZFIN;Acc:ZDB-GENE-010605-4]
100. erbb3a ENSDARG00000006202 903 1.464 - 0.728 - - - 0.736 - - - erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]

There are 1861 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA