Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for capn8

Gene Name Gene ID Reads Annotation
capn8 ENSDARG00000055715, ENSDARG00000111228 497 calpain 8 [Source:ZFIN;Acc:ZDB-GENE-050522-279]










Genes with expression patterns similar to capn8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. capn8 ENSDARG00000055715, ENSDARG00000111228 497 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calpain 8 [Source:ZFIN;Acc:ZDB-GENE-050522-279]
2. zgc:101744 ENSDARG00000038694 2857 2.158 0.737 0.717 - - - 0.704 - - - zgc:101744 [Source:ZFIN;Acc:ZDB-GENE-050320-111]
3. C2CD2 ENSDARG00000105000 2573 1.873 - 0.927 - - - 0.946 - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
4. dbnla ENSDARG00000008170 2129 1.844 0.887 - - - - 0.957 - - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
5. CABZ01008011.1 CABZ01008011.1 761 1.775 - 0.844 - - - 0.931 - - -
6. si:dkeyp-110g5.4 ENSDARG00000092482 249 1.762 - 0.805 - - - 0.957 - - - si:dkeyp-110g5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-452]
7. IL17RD ENSDARG00000098359 2309 1.742 - - - - - 0.883 0.859 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
8. AIFM3 ENSDARG00000062780 358 1.741 0.820 0.921 - - - - - - - apoptosis-inducing factor, mitochondrion-associated, 3 [Source:ZFIN;Acc:ZDB-GENE-140619-2]
9. si:dkey-92i15.4 ENSDARG00000078387 428 1.741 - - - - - 0.940 0.801 - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
10. stard10 ENSDARG00000097718 1041 1.722 - 0.844 - - - 0.878 - - - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
11. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 1.702 0.794 - - - - 0.908 - - - Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
12. C3H16orf58 C3H16orf58 487 1.675 - - - - - 0.919 0.756 - -
13. rgl3a ENSDARG00000071213 350 1.672 0.782 - - - - 0.890 - - - ral guanine nucleotide dissociation stimulator-like 3a [Source:ZFIN;Acc:ZDB-GENE-101130-1]
14. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 1.67 - - - - - 0.879 0.791 - - NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
15. mir203b 1077 1.668 - - - - - 0.916 0.752 - - microRNA 203b
16. cyp7c1 cyp7c1 1214 1.668 - - - - - 0.824 0.844 - -
17. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 1.667 0.729 - - - - 0.938 - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
18. c1galt1c1 ENSDARG00000036335 1623 1.667 0.841 - - - - 0.826 - - - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
19. znf750 ENSDARG00000102267 327 1.659 - - - - - 0.950 0.709 - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
20. selj 884 1.657 - - - - - 0.954 0.703 - - selenoprotein J
21. gtf2e1 ENSDARG00000000542, ENSDARG00000115244 899 1.653 - 0.805 - - - 0.848 - - - general transcription factor IIE, polypeptide 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041210-221]
22. rac2 ENSDARG00000038010 5837 1.653 0.792 - - - - 0.861 - - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
23. nfkbiaa ENSDARG00000005481 948 1.65 0.749 - - - - 0.901 - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-2227]
24. col4a3 ENSDARG00000003395 499 1.646 - 0.730 - - - 0.916 - - - collagen, type IV, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070802-4]
25. GPR31 431 1.644 - 0.770 - - - 0.874 - - - G protein-coupled receptor 31
26. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.643 - 0.720 - - - 0.923 - - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
27. mid1ip1b ENSDARG00000019302 1589 1.638 0.872 - - - - 0.766 - - - MID1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1720]
28. nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 1.626 - 0.703 - - - 0.923 - - - nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]
29. tjp3 ENSDARG00000002909 1978 1.624 - - - - - 0.824 0.800 - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
30. mctp2a ENSDARG00000001414 307 1.621 - - - - - 0.918 0.703 - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
31. kita ENSDARG00000043317 1091 1.61 - - - - - 0.742 0.868 - - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-980526-464]
32. csnk1g2a ENSDARG00000005458 2917 1.606 - 0.734 - - - 0.872 - - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
33. setd8b 2528 1.604 - - - - - 0.878 0.726 - - SET domain containing (lysine methyltransferase) 8b
34. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.602 - - - - - 0.787 0.815 - - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
35. ptplad1 ptplad1 1084 1.6 - 0.717 - - - - 0.883 - -
36. cbfa2t2 ENSDARG00000074337 4323 1.598 - 0.757 - - - 0.841 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
37. si:dkey-172m14.1 ENSDARG00000052693 875 1.587 - - - - - 0.829 0.758 - - si:dkey-172m14.1 [Source:ZFIN;Acc:ZDB-GENE-060526-221]
38. tspan33 tspan33 453 1.586 - 0.837 - - - - 0.749 - -
39. slc44a2 ENSDARG00000037059 1903 1.586 - 0.738 - - - 0.848 - - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
40. MTUS1 MTUS1 1334 1.579 0.864 - - - - 0.715 - - -
41. rasl11a ENSDARG00000046013 1627 1.57 - - - - - 0.856 0.714 - - RAS-like, family 11, member A [Source:ZFIN;Acc:ZDB-GENE-050417-384]
42. SLC22A16 ENSDARG00000015869 1086 1.563 - - - - - 0.834 0.729 - - solute carrier family 22 (organic cation/carnitine transporter), member 16 [Source:ZFIN;Acc:ZDB-GENE-041001-166]
43. samhd1 ENSDARG00000071288 1279 1.547 0.704 - - - - - 0.843 - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
44. si:dkeyp-104h9.5 ENSDARG00000073801 722 1.535 0.766 - - - - 0.769 - - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
45. impad1 ENSDARG00000058114 667 1.533 - 0.725 - - - - 0.808 - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
46. yipf6 ENSDARG00000054433, ENSDARG00000116553 3052 1.532 - 0.792 - - - 0.740 - - - Yip1 domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-040625-76]
47. pnp5a ENSDARG00000078619 1461 1.527 - - - - - 0.819 0.708 - - purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
48. gdpd1 ENSDARG00000017261, ENSDARG00000111194 2853 1.515 0.814 - - - - - 0.701 - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040822-22]
49. RAPGEFL1 ENSDARG00000079912 1074 1.513 - - - - - 0.793 0.720 - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
50. si:ch73-52f15.5 ENSDARG00000095400 1368 1.512 0.762 - - - - 0.750 - - - si:ch73-52f15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-341]
51. ATOX1 ENSDARG00000087693 4016 1.509 0.798 - - - - 0.711 - - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
52. gdap2 ENSDARG00000021569 1013 1.482 - - - - - 0.775 0.707 - - ganglioside induced differentiation associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-31]
53. nufip2 ENSDARG00000069066 3965 1.48 0.724 - - - - 0.756 - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
54. CLEC4A CLEC4A 1016 1.476 0.730 - - - - - 0.746 - -
55. CU929307.1 ENSDARG00000102297 900 1.456 - 0.704 - - - 0.752 - - -
56. dlx2a ENSDARG00000079964 1253 1.454 0.738 - - - - - 0.716 - - distal-less homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-212]
57. slc26a5 ENSDARG00000022424 976 1.451 - 0.726 - - - - 0.725 - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]
58. cops5 ENSDARG00000057624 1485 1.427 - - - - - 0.725 0.702 - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
59. CHST5 CHST5 1293 1.416 - 0.700 - - - 0.716 - - -
60. im:7154842 im:7154842 434 0.978 - - - - - 0.978 - - -
61. cldnb ENSDARG00000009544 6036 0.968 - - - - - 0.968 - - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
62. tefb ENSDARG00000098103 370 0.966 - - - - - 0.966 - - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
63. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 0.966 - - - - - 0.966 - - - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
64. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 0.962 - - - - - 0.962 - - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
65. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.961 - - - - - 0.961 - - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
66. ccdc80l2 ENSDARG00000044695 150 0.961 - - - - - 0.961 - - - coiled-coil domain containing 80 like 2 [Source:ZFIN;Acc:ZDB-GENE-091118-63]
67. krt1-19d ENSDARG00000023082 902 0.961 - - - - - 0.961 - - - keratin, type 1, gene 19d [Source:ZFIN;Acc:ZDB-GENE-060316-1]
68. fam105bb fam105bb 1253 0.955 - - - - - 0.955 - - -
69. dhrs13a.2 ENSDARG00000111240 491 0.954 - - - - - 0.954 - - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
70. tmem39b ENSDARG00000018956 590 0.954 - - - - - 0.954 - - - transmembrane protein 39B [Source:ZFIN;Acc:ZDB-GENE-030131-6042]
71. unc93a ENSDARG00000041554 427 0.954 - - - - - 0.954 - - - unc-93 homolog A [Source:ZFIN;Acc:ZDB-GENE-041014-304]
72. hig1 hig1 2493 0.953 - - - - - 0.953 - - -
73. nphp3 ENSDARG00000078261 110 0.952 - - - - - 0.952 - - - nephronophthisis 3 [Source:ZFIN;Acc:ZDB-GENE-091204-117]
74. mgst1 mgst1 2820 0.952 - - - - - 0.952 - - -
75. actr2a ENSDARG00000052438 5838 0.952 - - - - - 0.952 - - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
76. CCDC64B CCDC64B 337 0.951 - - - - - 0.951 - - -
77. si:ch211-150o23.2 ENSDARG00000092746 788 0.951 - - - - - 0.951 - - - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
78. cux1b ENSDARG00000043134 641 0.951 - - - - - 0.951 - - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
79. MYOF ENSDARG00000006112 436 0.951 - - - - - 0.951 - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
80. nrm ENSDARG00000063690 1371 0.95 - - - - - 0.950 - - - nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
81. bc2 5213 0.95 - - - - - 0.950 - - - putative breast adenocarcinoma marker
82. MSL1 MSL1 223 0.949 - - - - - 0.949 - - -
83. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 0.949 - - - - - 0.949 - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
84. rwdd ENSDARG00000068256 964 0.949 - - - - - 0.949 - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
85. SPATS2 SPATS2 1124 0.948 - - - - - 0.948 - - -
86. myh14 ENSDARG00000073732 502 0.948 - - - - - 0.948 - - - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
87. PCSK6 ENSDARG00000104574 710 0.948 - - - - - 0.948 - - - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
88. zgc:101569 ENSDARG00000038876 1525 0.948 - - - - - 0.948 - - - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
89. sema6d ENSDARG00000002748 133 0.948 - - - - - 0.948 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
90. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.948 - - - - - 0.948 - - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
91. grp ENSDARG00000043074 747 0.947 - - - - - 0.947 - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
92. si:dkey-27i16.3 si:dkey-27i16.3 494 0.946 - - - - - 0.946 - - -
93. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.945 - - - - - 0.945 - - - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
94. CR759791.3 CR759791.3 134 0.945 - - - - - 0.945 - - -
95. TESK1_1 TESK1_1 276 0.945 - - - - - 0.945 - - -
96. CABZ01005777.1 CABZ01005777.1 505 0.945 - - - - - 0.945 - - -
97. CACUL1 ENSDARG00000021885 691 0.945 - - - - - 0.945 - - - CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
98. FYCO1 FYCO1 194 0.944 - - - - - 0.944 - - -
99. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.944 - - - - - 0.944 - - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
100. si:ch211-210c8.6 ENSDARG00000017811 908 0.944 - - - - - 0.944 - - - si:ch211-210c8.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3630]

There are 1078 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA