Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for bnip3

Gene Name Gene ID Reads Annotation
bnip3 ENSDARG00000099961 78 BCL2 interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8060]










Genes with expression patterns similar to bnip3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bnip3 ENSDARG00000099961 78 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 BCL2 interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8060]
2. armc5 ENSDARG00000078083 114 1.545 - 0.732 - - - - 0.813 - - armadillo repeat containing 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7382]
3. CABZ01029822.1 ENSDARG00000086931 1654 1.485 - 0.733 - - - 0.752 - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
4. col15a1b ENSDARG00000061848 398 1.449 - 0.741 - - - - 0.708 - - collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]
5. zgc:158254 ENSDARG00000071233 265 0.964 - - - - - - 0.964 - - zgc:158254 [Source:ZFIN;Acc:ZDB-GENE-070112-2222]
6. crispld1b ENSDARG00000013293 200 0.956 - 0.956 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1204]
7. crtac1a ENSDARG00000059826 22 0.944 - 0.944 - - - - - - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
8. tubd1 ENSDARG00000058219, ENSDARG00000110746 47 0.929 - 0.929 - - - - - - - tubulin, delta 1 [Source:ZFIN;Acc:ZDB-GENE-040625-73]
9. BX511257.1 BX511257.1 66 0.916 - 0.916 - - - - - - -
10. iffo1b ENSDARG00000062108 192 0.908 - - - - - - 0.908 - - intermediate filament family orphan 1b [Source:ZFIN;Acc:ZDB-GENE-050208-308]
11. foxj1b ENSDARG00000088290 343 0.908 - 0.908 - - - - - - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
12. kctd12.1 ENSDARG00000069843, ENSDARG00000113802 141 0.908 - 0.908 - - - - - - - potassium channel tetramerisation domain containing 12.1 [Source:ZFIN;Acc:ZDB-GENE-030902-5]
13. CABZ01074181.1 CABZ01074181.1 396 0.886 - 0.886 - - - - - - -
14. STRIP2 ENSDARG00000059003 394 0.884 - 0.884 - - - - - - - striatin interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120328-1]
15. AL935029.1 AL935029.1 514 0.881 - 0.881 - - - - - - -
16. si:ch211-152p11.8 46 0.88 - 0.880 - - - - - - - si:ch211-152p11.8, transcript variant X2
17. CU856173.1 CU856173.1 26 0.88 - 0.880 - - - - - - -
18. C9H3orf17 C9H3orf17 69 0.876 - 0.876 - - - - - - -
19. tyr ENSDARG00000039077 568 0.876 - 0.876 - - - - - - - tyrosinase [Source:ZFIN;Acc:ZDB-GENE-991026-3]
20. urad ENSDARG00000071579, ENSDARG00000115541 46 0.876 - - 0.876 - - - - - - ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070112-472]
21. CDKN2AIP ENSDARG00000035853 341 0.875 - - - - - - 0.875 - - CDKN2A interacting protein [Source:ZFIN;Acc:ZDB-GENE-041010-188]
22. trpm1b ENSDARG00000103476 369 0.875 - 0.875 - - - - - - - transient receptor potential cation channel, subfamily M, member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-31]
23. rars2 ENSDARG00000032277 54 0.874 - 0.874 - - - - - - - arginyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-1244]
24. ZCCHC4 ENSDARG00000104531, ENSDARG00000114323 109 0.874 0.874 - - - - - - - - zinc finger, CCHC domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-080204-65]
25. itfg2 ENSDARG00000002174 114 0.873 - 0.873 - - - - - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
26. adarb1b ENSDARG00000003544 31 0.873 - 0.873 - - - - - - - adenosine deaminase, RNA-specific, B1b [Source:ZFIN;Acc:ZDB-GENE-030219-15]
27. si:dkey-25i10.3 si:dkey-25i10.3 5 0.872 - - 0.872 - - - - - -
28. EGLN1 EGLN1 62 0.864 - 0.864 - - - - - - -
29. rxfp3.2a 11 0.864 - - 0.864 - - - - - - relaxin/insulin-like family peptide receptor 3.2a
30. mgat4a ENSDARG00000063330 3 0.864 - - 0.864 - - - - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
31. KIF13A ENSDARG00000069594 352 0.862 - 0.862 - - - - - - - kinesin family member 13A [Source:ZFIN;Acc:ZDB-GENE-090901-1]
32. cox4i2 ENSDARG00000022509 362 0.855 - 0.855 - - - - - - - cytochrome c oxidase subunit 4I2 [Source:ZFIN;Acc:ZDB-GENE-040426-1775]
33. tcap ENSDARG00000007344 276 0.851 - 0.851 - - - - - - - titin-cap (telethonin) [Source:ZFIN;Acc:ZDB-GENE-070501-5]
34. camk2n2 ENSDARG00000111102 69 0.85 - - - - - 0.850 - - - calcium/calmodulin-dependent protein kinase II inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-389]
35. si:ch211-247j9.1 ENSDARG00000079283 217 0.85 - 0.850 - - - - - - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
36. CABZ01112358.1 CABZ01112358.1 667 0.848 0.848 - - - - - - - -
37. chmp5a ENSDARG00000038855 129 0.847 - 0.847 - - - - - - - charged multivesicular body protein 5a [Source:ZFIN;Acc:ZDB-GENE-060503-60]
38. jag1a ENSDARG00000030289 1275 0.847 - 0.847 - - - - - - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
39. AKR1C1 AKR1C1 32 0.846 - 0.846 - - - - - - -
40. nkx3.2 ENSDARG00000037639 575 0.846 - 0.846 - - - - - - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
41. si:ch211-28p3.4 ENSDARG00000091009 280 0.845 - 0.845 - - - - - - - si:ch211-28p3.4 [Source:ZFIN;Acc:ZDB-GENE-130603-54]
42. TMEM27 TMEM27 261 0.845 - 0.845 - - - - - - -
43. abcc6a ENSDARG00000016750 10 0.843 - - - - - - 0.843 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
44. abhd13 ENSDARG00000059209 43 0.843 - 0.843 - - - - - - - abhydrolase domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-051120-54]
45. wnt2ba ENSDARG00000005050 11 0.843 - - - - - - 0.843 - - wingless-type MMTV integration site family, member 2Ba [Source:ZFIN;Acc:ZDB-GENE-030717-2]
46. si:dkey-5i3.5 ENSDARG00000058345, ENSDARG00000110584 60 0.843 - - - - - - 0.843 - - si:dkey-5i3.5 [Source:ZFIN;Acc:ZDB-GENE-070424-162]
47. caprin2 ENSDARG00000020749 39 0.843 - - - - - 0.843 - - - caprin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040812-2]
48. acrc 242 0.842 - 0.842 - - - - - - - acidic repeat containing, transcript variant X3
49. fnbp1 fnbp1 5 0.842 - - 0.842 - - - - - -
50. PEG3_4 PEG3_4 256 0.835 - 0.835 - - - - - - -
51. tjap1 ENSDARG00000010681 457 0.834 - 0.834 - - - - - - - tight junction associated protein 1 (peripheral) [Source:ZFIN;Acc:ZDB-GENE-081107-47]
52. nptx1l ENSDARG00000074671 569 0.833 - 0.833 - - - - - - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
53. BX511066.4 BX511066.4 6 0.833 - - 0.833 - - - - - -
54. zgc:163143 ENSDARG00000076437 166 0.828 - 0.828 - - - - - - - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
55. zgc:123349 zgc:123349 730 0.824 - - - - - - 0.824 - -
56. r3hdml ENSDARG00000030650 133 0.823 - 0.823 - - - - - - - R3H domain containing-like [Source:ZFIN;Acc:ZDB-GENE-090313-275]
57. ZNF337_7 ZNF337_7 198 0.822 - 0.822 - - - - - - -
58. ulk1a ENSDARG00000062518 10 0.821 0.821 - - - - - - - - unc-51 like autophagy activating kinase 1a [Source:ZFIN;Acc:ZDB-GENE-080723-31]
59. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 0.821 0.821 - - - - - - - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
60. si:dkey-30c15.9 si:dkey-30c15.9 4 0.821 0.821 - - - - - - - -
61. cps1 ENSDARG00000020028 67 0.821 - - - - - - 0.821 - - carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
62. sprb ENSDARG00000058553 1694 0.821 - 0.821 - - - - - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
63. zic4 ENSDARG00000031307 1228 0.819 - 0.819 - - - - - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
64. nrip2 ENSDARG00000079985 505 0.819 - - - - - 0.819 - - - nuclear receptor interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9425]
65. hormad1 ENSDARG00000040254 12 0.816 - 0.816 - - - - - - - HORMA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-49]
66. CU019646.1 ENSDARG00000117632 223 0.814 - 0.814 - - - - - - - uncharacterized LOC110439932 [Source:NCBI gene;Acc:110439932]
67. NPDC1 NPDC1 126 0.812 - 0.812 - - - - - - -
68. nek1 ENSDARG00000022350 158 0.812 - 0.812 - - - - - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
69. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 0.812 - 0.812 - - - - - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
70. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.81 - 0.810 - - - - - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
71. nots ENSDARG00000099824 9 0.81 - 0.810 - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
72. mknk2a ENSDARG00000011373 230 0.81 - 0.810 - - - - - - - MAP kinase interacting serine/threonine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6099]
73. CABZ01028403.3 CABZ01028403.3 4 0.81 - 0.810 - - - - - - -
74. si:dkey-202n8.1 si:dkey-202n8.1 35 0.81 - 0.810 - - - - - - -
75. dscamb ENSDARG00000028118 82 0.81 - 0.810 - - - - - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
76. zgc:174862 ENSDARG00000077571 201 0.81 - 0.810 - - - - - - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
77. zgc:193682 zgc:193682 15 0.81 - 0.810 - - - - - - -
78. CABZ01067743.1 CABZ01067743.1 48 0.81 - 0.810 - - - - - - -
79. pou4f2 ENSDARG00000069737 451 0.81 - 0.810 - - - - - - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
80. sc:d0661 sc:d0661 12 0.81 - 0.810 - - - - - - -
81. CABZ01072511.1 CABZ01072511.1 88 0.81 - 0.810 - - - - - - -
82. CABZ01090951.1 CABZ01090951.1 78 0.81 - 0.810 - - - - - - -
83. fgf6b ENSDARG00000045856 136 0.81 - 0.810 - - - - - - - fibroblast growth factor 6b [Source:ZFIN;Acc:ZDB-GENE-050201-5]
84. NHSL1 NHSL1 182 0.81 - 0.810 - - - - - - -
85. zgc:195001 ENSDARG00000070484 3281 0.809 - 0.809 - - - - - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
86. osbp2 ENSDARG00000053487 42 0.809 - - 0.809 - - - - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
87. capn1b ENSDARG00000052748, ENSDARG00000117045 320 0.808 - 0.808 - - - - - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
88. ENSDARG00000088912 ENSDARG00000088912 8 0.807 - - - - - 0.807 - - -
89. CABZ01046432.1 ENSDARG00000079325 11 0.807 - - - - - 0.807 - - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
90. DNAJC14 ENSDARG00000105398 20 0.807 - - - - - 0.807 - - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
91. foxn1 ENSDARG00000011879 22 0.807 - - - - - 0.807 - - - forkhead box N1 [Source:ZFIN;Acc:ZDB-GENE-021008-1]
92. ZC3H7B 2 0.807 - - - - - 0.807 - - - zinc finger CCCH-type containing 7B
93. MAST1 MAST1 29 0.807 - - - - - 0.807 - - -
94. foxd3 ENSDARG00000021032 11 0.807 - - - - - 0.807 - - - forkhead box D3 [Source:ZFIN;Acc:ZDB-GENE-980526-143]
95. mfsd12b 8 0.807 - - - - - 0.807 - - - major facilitator superfamily domain containing 12b
96. zgc:113691 ENSDARG00000038898 36 0.807 - - - - - 0.807 - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
97. csf1b ENSDARG00000068263 248 0.804 - 0.804 - - - - - - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
98. C20H2orf44 C20H2orf44 486 0.804 - 0.804 - - - - - - -
99. zgc:77151 ENSDARG00000054307 120 0.803 - 0.803 - - - - - - - zgc:77151 [Source:ZFIN;Acc:ZDB-GENE-030131-9097]
100. sema4ab ENSDARG00000062352 409 0.802 - 0.802 - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]

There are 317 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA