Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for bbs1

Gene Name Gene ID Reads Annotation
bbs1 ENSDARG00000075169, ENSDARG00000114301 7 Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]










Genes with expression patterns similar to bbs1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]
2. col5a2b ENSDARG00000024847 17 2 - - - - 1.000 - 1.000 - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
3. CABZ01045617.2 CABZ01045617.2 13 1.979 - - - - - - 1.000 0.979 -
4. slc9a3.2 ENSDARG00000036722 31 1.966 - - - - 1.000 - - - 0.966 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
5. BX547934.1 ENSDARG00000097061 35 1.781 - - - - 0.781 - 1.000 - -
6. si:rp71-10g3.1 si:rp71-10g3.1 6 1.75 - - 0.750 - - - 1.000 - -
7. prelp ENSDARG00000070597 99 1.713 - - - 0.713 1.000 - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
8. IKZF4 ENSDARG00000037068 36 1.66 - - - - 0.818 - 0.842 - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
9. dnm3 dnm3 45 1.644 - - 0.856 - - - 0.788 - -
10. si:ch211-271e10.1 ENSDARG00000095735 15 1.605 - - 0.736 - - - - 0.869 - si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
11. TRIM8 TRIM8 5 1 - - - - 1.000 - - - -
12. CR749167.1 ENSDARG00000100165 38 1 - - - - 1.000 - - - -
13. DGKG ENSDARG00000062696 1 1 - - - - 1.000 - - - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
14. si:dkey-85k15.6 ENSDARG00000094385 4 1 - - - - - - 1.000 - - si:dkey-85k15.6 [Source:ZFIN;Acc:ZDB-GENE-100922-216]
15. fancl ENSDARG00000007885 0 1 - - - - 1.000 - - - - FA complementation group L [Source:ZFIN;Acc:ZDB-GENE-040426-1045]
16. ADTRP ADTRP 2 1 - - - - - - - 1.000 -
17. SOX8 SOX8 22 1 - - - - 1.000 - - - -
18. BX294653.4 BX294653.4 1 1 - - - - 1.000 - - - -
19. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - 1.000 - - - -
20. si:dkey-176f19.2 si:dkey-176f19.2 6 1 - - - - - - - 1.000 -
21. UNC119 UNC119 104 1 - - - - 1.000 - - - -
22. ccdc172 ENSDARG00000039937 1 1 - - - - - - 1.000 - - coiled-coil domain containing 172 [Source:ZFIN;Acc:ZDB-GENE-090313-1]
23. BX119910.9 BX119910.9 7 1 - - - - 1.000 - - - -
24. TTC34 ENSDARG00000091221 3 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
25. PLCXD1_3 PLCXD1_3 35 1 - - - - - - 1.000 - -
26. utrnp 0 1 - - - - 1.000 - - - - utrophin, pseudogene
27. CHST15 ENSDARG00000074527 210 1 - - - - - - 1.000 - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
28. fubp3 ENSDARG00000086896 21 1 - - - - 1.000 - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
29. scospondin ENSDARG00000067859 4 1 - - - - - - 1.000 - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
30. AL929217.1 ENSDARG00000059891 1 1 - - - - 1.000 - - - - gamma-aminobutyric acid receptor subunit pi-like [Source:NCBI gene;Acc:562831]
31. CCDC96 ENSDARG00000035963 5 1 - - - - 1.000 - - - - coiled-coil domain containing 96 [Source:ZFIN;Acc:ZDB-GENE-081022-156]
32. CU695216.1 CU695216.1 0 1 - - - - 1.000 - - - -
33. pth2 ENSDARG00000022951 7 1 - - - - 1.000 - - - - parathyroid hormone 2 [Source:ZFIN;Acc:ZDB-GENE-041102-1]
34. wee1 ENSDARG00000093864, ENSDARG00000114333, ENSDARG00000115653 1 1 - - - - 1.000 - - - - WEE1 G2 checkpoint kinase [Source:ZFIN;Acc:ZDB-GENE-030131-5268]
35. lrrc3 ENSDARG00000078415 0 1 - - - - - - 1.000 - - leucine rich repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-080327-13]
36. cdh15 ENSDARG00000068191, ENSDARG00000112512, ENSDARG00000116974 121 1 - - - - - - 1.000 - - cadherin 15, type 1, M-cadherin (myotubule) [Source:ZFIN;Acc:ZDB-GENE-030131-780]
37. si:ch211-113a14.14 si:ch211-113a14.14 3 1 - - - - 1.000 - - - -
38. frmd7 ENSDARG00000068958 1 1 - - - - - - 1.000 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
39. ugt2a6 ENSDARG00000039501 5 1 - - - - - - - 1.000 - UDP glucuronosyltransferase 2 family, polypeptide A6 [Source:ZFIN;Acc:ZDB-GENE-081104-3]
40. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - - - - 1.000 - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
41. serpina10a ENSDARG00000005924 1177 1 - - - - - - 1.000 - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10a [Source:ZFIN;Acc:ZDB-GENE-041014-246]
42. serpinf2a ENSDARG00000076448 4 1 - - - - - - 1.000 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2a [Source:ZFIN;Acc:ZDB-GENE-060822-1]
43. si:dkey-103k4.5 si:dkey-103k4.5 11 1 - - - - - - 1.000 - -
44. CABZ01029902.1 CABZ01029902.1 0 1 - - - - 1.000 - - - -
45. Vault_1 Vault_1 6 1 - - - - 1.000 - - - -
46. AL935181.2 AL935181.2 9 1 - - - - - - 1.000 - -
47. zgc:171887 ENSDARG00000058791 0 1 - - - - 1.000 - - - - zgc:171887 [Source:ZFIN;Acc:ZDB-GENE-080220-39]
48. CABZ01065246.2 CABZ01065246.2 45 1 - - - - - - 1.000 - -
49. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - 1.000 - - - -
50. C14H11orf80 C14H11orf80 1 1 - - - - - - 1.000 - -
51. CABZ01058422.1 CABZ01058422.1 0 1 - - - - 1.000 - - - -
52. CT573494.2 CT573494.2 58 1 - - - - - - 1.000 - -
53. TMEM136 TMEM136 13 1 - - - - - - 1.000 - -
54. sagb ENSDARG00000038378 28 1 - - - - 1.000 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
55. CMA1_8 CMA1_8 10 1 - - - - - - 1.000 - -
56. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - - - - 1.000 - -
57. or109-5 ENSDARG00000102990 0 1 - - - - - - 1.000 - - odorant receptor, family D, subfamily 109, member 5 [Source:ZFIN;Acc:ZDB-GENE-070804-6]
58. si:dkey-206f10.5 si:dkey-206f10.5 1 1 - - - - 1.000 - - - -
59. Mar-11 Mar-11 5 1 - - - - 1.000 - - - -
60. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 - - - - 1.000 - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
61. C2CD4C_1 C2CD4C_1 24 1 - - - - - - 1.000 - -
62. glis1b ENSDARG00000027933 14 1 - - - - 1.000 - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
63. olfcg9 ENSDARG00000105189 1 1 - - - - - - 1.000 - - olfactory receptor C family, g9 [Source:ZFIN;Acc:ZDB-GENE-081029-6]
64. si:dkeyp-35e5.5 ENSDARG00000104026 3 1 - - - - 1.000 - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
65. kcnq1 ENSDARG00000059798 11 1 - - - - - - 1.000 - - potassium voltage-gated channel, KQT-like subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-061214-5]
66. pcdh2g16 1 1 - - - - 1.000 - - - - protocadherin 2 gamma 16
67. gcgb ENSDARG00000040907 182 1 - - - - - - 1.000 - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
68. CMA1_6 CMA1_6 2 1 - - - - 1.000 - - - -
69. ubxn1 ENSDARG00000090309 17 1 - - - - - - 1.000 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
70. hp ENSDARG00000051890, ENSDARG00000095807 4 1 - - - - 1.000 - - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
71. KRT9 KRT9 7 1 - - - - 1.000 - - - -
72. igsf21b ENSDARG00000056084 6 1 - - - - 1.000 - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
73. BX548067.4 BX548067.4 0 1 - - - - 1.000 - - - -
74. zymnd12 17 1 - - - - - - 1.000 - - zinc finger, MYND-type containing 12, transcript variant X1
75. ftr26 ENSDARG00000092961 1 1 - - - - - - - 1.000 - finTRIM family, member 26 [Source:ZFIN;Acc:ZDB-GENE-070912-316]
76. olfcg5 ENSDARG00000102459 5 1 - - - - 1.000 - - - - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
77. gabrr2b ENSDARG00000014057 9 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
78. ptk2.2 ptk2.2 3 1 - - - - 1.000 - - - -
79. ttc25 ENSDARG00000058140 2 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
80. CABZ01079442.1 CABZ01079442.1 1 1 - - - - - - 1.000 - -
81. ctsa ENSDARG00000098114 2 1 - - - - - - - 1.000 - cathepsin A [Source:ZFIN;Acc:ZDB-GENE-030131-537]
82. guca1g ENSDARG00000045737, ENSDARG00000114717 22 1 - - - - 1.000 - - - - guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
83. si:ch73-366i20.1_1 ENSDARG00000092949 1 1 - - - - - - 1.000 - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
84. ft2 ENSDARG00000109567 5 1 - - - - - - 1.000 - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
85. si:dkey-246j6.2 si:dkey-246j6.2 0 1 - - - - 1.000 - - - -
86. CCDC141 ENSDARG00000095675 94 1 - - - - - - 1.000 - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
87. rab44 ENSDARG00000028389 27 1 - - - - - - 1.000 - - RAB44, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040724-117]
88. GUCY2C ENSDARG00000014320, ENSDARG00000116238 8 1 - - - - 1.000 - - - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
89. inha ENSDARG00000052433, ENSDARG00000116262 6 1 - - - - - - 1.000 - - inhibin subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060503-554]
90. colm colm 36 1 - - - - - - 1.000 - -
91. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - - - - - 1.000 - -
92. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1 - - - - - - 1.000 - - family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
93. zgc:92590 ENSDARG00000040282 13 1 - - - - 1.000 - - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
94. tnfsf11 ENSDARG00000068141 0 1 - - - - - - 1.000 - - TNF superfamily member 11 [Source:ZFIN;Acc:ZDB-GENE-090805-2]
95. htr1b ENSDARG00000053987 11 1 - - - - - - 1.000 - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
96. ddr2b ENSDARG00000058695 7 1 - - - - 1.000 - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
97. fgf8b ENSDARG00000039615 29 1 - - - - - - 1.000 - - fibroblast growth factor 8 b [Source:ZFIN;Acc:ZDB-GENE-010122-1]
98. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1 - - - - - - 1.000 - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
99. htr5a htr5a 4 1 - - - - 1.000 - - - -
100. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1 - - - - - - 1.000 - - H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]

There are 559 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA