Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atr

Gene Name Gene ID Reads Annotation
atr ENSDARG00000079625 231 ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]










Genes with expression patterns similar to atr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atr ENSDARG00000079625 231 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
2. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1.853 - - - - - 0.873 0.980 - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
3. zgc:114123 ENSDARG00000044956 9 1.853 - - - - - 0.873 0.980 - - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
4. ugt5c1 ENSDARG00000061444 6 1.853 - - - - - 0.873 0.980 - - UDP glucuronosyltransferase 5 family, polypeptide C1 [Source:ZFIN;Acc:ZDB-GENE-050419-68]
5. rab42a ENSDARG00000034215 692 1.793 - - - 0.804 - - 0.989 - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
6. slx4 ENSDARG00000061414, ENSDARG00000093798 44 1.743 - - - - 0.796 - 0.947 - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
7. zrsr2 ENSDARG00000058448 335 1.738 - - - - - 0.800 0.938 - - zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495]
8. lhfpl2a ENSDARG00000009653 35 1.737 - - - - - 0.799 0.938 - - LHFPL tetraspan subfamily member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1839]
9. pglyrp2 ENSDARG00000062998 11 1.705 - - - - 0.832 0.873 - - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
10. grap2a ENSDARG00000006468 70 1.705 - 0.847 - - - - 0.858 - - GRB2 related adaptor protein 2a [Source:ZFIN;Acc:ZDB-GENE-050417-275]
11. CABZ01044346.1 CABZ01044346.1 12 1.694 - 0.714 - - - - 0.980 - -
12. ccm2l ENSDARG00000063089 100 1.687 - 0.820 - 0.867 - - - - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
13. kctd3 ENSDARG00000060854 82 1.686 - 0.839 - - - - 0.847 - - potassium channel tetramerization domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-169]
14. slc25a38a ENSDARG00000059805 236 1.679 - - - - - 0.873 0.806 - - solute carrier family 25, member 38a [Source:ZFIN;Acc:ZDB-GENE-060929-320]
15. tph1a ENSDARG00000029432, ENSDARG00000114918 24 1.666 - - - - 0.826 - 0.840 - - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
16. mhc1uba ENSDARG00000075963 31 1.648 - - 0.775 - - 0.873 - - - major histocompatibility complex class I UBA [Source:ZFIN;Acc:ZDB-GENE-990415-145]
17. BEND2 BEND2 92 1.621 0.746 0.875 - - - - - - -
18. VMO1 VMO1 11 1.614 - - 0.741 - - 0.873 - - -
19. zgc:91849 ENSDARG00000104716 237 1.609 - - 0.715 - - - 0.894 - - zgc:91849 [Source:ZFIN;Acc:ZDB-GENE-040718-438]
20. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.609 - - - 0.857 0.752 - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
21. rad17 ENSDARG00000018918 332 1.594 - - - 0.812 0.782 - - - - RAD17 checkpoint clamp loader component [Source:ZFIN;Acc:ZDB-GENE-040718-409]
22. TDRD7B ENSDARG00000077523 124 1.588 - - - - 0.764 - 0.824 - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
23. BX682234.1 ENSDARG00000074732 5 1.587 - 0.714 - - - 0.873 - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
24. shpk ENSDARG00000002355 84 1.585 - 0.843 - - - - 0.742 - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
25. slc25a27 ENSDARG00000042873 297 1.577 - - 0.737 - - 0.840 - - - solute carrier family 25, member 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1290]
26. stim1b ENSDARG00000061560 146 1.565 - - - 0.846 - - 0.719 - - stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]
27. si:ch1073-181h11.4 ENSDARG00000098347 86 1.548 - - - - 0.760 0.788 - - - si:ch1073-181h11.4 [Source:ZFIN;Acc:ZDB-GENE-091204-426]
28. DUSP23 DUSP23 121 1.538 - 0.832 0.706 - - - - - -
29. kcnk5a ENSDARG00000023587, ENSDARG00000111204 128 1.514 0.708 0.806 - - - - - - - potassium channel, subfamily K, member 5a [Source:ZFIN;Acc:ZDB-GENE-051113-112]
30. PEG3_10 PEG3_10 45 1.51 - 0.714 - - 0.796 - - - -
31. ptprc ENSDARG00000071437 104 1.509 - - - - - 0.774 0.735 - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
32. si:dkey-163m14.7 65 1.499 - - - - 0.783 - - 0.716 - si:dkey-163m14.7
33. CABZ01073032.1 CABZ01073032.1 125 1.494 - - - - - 0.725 0.769 - -
34. ARSI_1 ARSI_1 38 1.493 - - - - - 0.767 0.726 - -
35. FP017169.3 FP017169.3 216 1.492 - 0.733 - - 0.759 - - - -
36. itgbl1 ENSDARG00000040985 705 1.482 0.772 - 0.710 - - - - - - integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
37. ZNF784_4 ZNF784_4 113 1.482 - - - - - - 0.781 0.701 -
38. DPYD DPYD 52 1.475 - 0.714 - - - 0.761 - - -
39. SAMD14 145 1.469 0.715 0.754 - - - - - - - sterile alpha motif domain containing 14, transcript variant X3
40. si:ch211-229l10.12 si:ch211-229l10.12 95 1.463 - - - - 0.724 0.739 - - -
41. pcsk2 ENSDARG00000019451 442 1.454 - - - 0.727 0.727 - - - - proprotein convertase subtilisin/kexin type 2 [Source:ZFIN;Acc:ZDB-GENE-090608-1]
42. mpg ENSDARG00000069729 43 1.446 - 0.714 0.732 - - - - - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
43. si:dkey-15j16.6 ENSDARG00000042698 138 1.427 0.708 0.719 - - - - - - - si:dkey-15j16.6 [Source:ZFIN;Acc:ZDB-GENE-130531-45]
44. PLA2R1 ENSDARG00000077474 45 1.427 - 0.714 - - - - - 0.713 - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
45. cyp4f3 ENSDARG00000053530 10 1.426 - 0.714 - - - 0.712 - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
46. slc30a4 ENSDARG00000007180 158 1.418 - - 0.706 - - - - 0.712 - solute carrier family 30 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1408]
47. ARHGAP42 ARHGAP42 53 1 - - - - - 1.000 - - -
48. CABZ01055343.4 CABZ01055343.4 9 1 - - - - - 1.000 - - -
49. lrguk ENSDARG00000069698 5 1 - - - - - 1.000 - - - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
50. zte25 zte25 29 1 - - - - - 1.000 - - -
51. golga2 ENSDARG00000063197 30 1 - - - - - 1.000 - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
52. HNRNPUL2 HNRNPUL2 110 1 - - - - - 1.000 - - -
53. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - - - - 1.000 - - -
54. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - - - - 1.000 - - -
55. CABZ01088933.1 CABZ01088933.1 40 1 - - - - - 1.000 - - -
56. ECT2L 39 1 - - - - - 1.000 - - - epithelial cell transforming 2 like, transcript variant X4
57. ptk2ba ENSDARG00000022841 19 1 - - - - - 1.000 - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
58. si:dkey-13d5.1 si:dkey-13d5.1 3 1 - - - - - 1.000 - - -
59. NFATC4 ENSDARG00000054162 44 1 - - - - - 1.000 - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
60. map2k4a ENSDARG00000063583 38 1 - - - - - 1.000 - - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
61. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - 1.000 - - -
62. ttc7a ENSDARG00000074760 39 0.98 - - - - - - 0.980 - - tetratricopeptide repeat domain 7A [Source:ZFIN;Acc:ZDB-GENE-010319-27]
63. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 0.98 - - - - - - 0.980 - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
64. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 0.98 - - - - - - 0.980 - - nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
65. CABZ01059415.1 CABZ01059415.1 1 0.98 - - - - - - 0.980 - -
66. crygm2c ENSDARG00000117097 1 0.98 - - - - - - 0.980 - - crystallin, gamma M2c [Source:ZFIN;Acc:ZDB-GENE-050516-11]
67. paqr5a ENSDARG00000041145, ENSDARG00000115247 38 0.98 - - - - - - 0.980 - - progestin and adipoQ receptor family member Va [Source:ZFIN;Acc:ZDB-GENE-040426-867]
68. cldn2 ENSDARG00000044387 24 0.98 - - - - - - 0.980 - - claudin 2 [Source:ZFIN;Acc:ZDB-GENE-040912-26]
69. acer3 ENSDARG00000093366 7 0.98 - - - - - - 0.980 - - alkaline ceramidase 3 [Source:ZFIN;Acc:ZDB-GENE-091204-155]
70. CABZ01072083.1 CABZ01072083.1 56 0.98 - - - - - - 0.980 - -
71. uo:ion006 uo:ion006 56 0.98 - - - - - - 0.980 - -
72. zgc:66313 ENSDARG00000030357 45 0.98 - - - - - - 0.980 - - zgc:66313 [Source:ZFIN;Acc:ZDB-GENE-040426-1606]
73. CR356223.2_1 ENSDARG00000100655 1 0.98 - - - - - - 0.980 - -
74. si:dkey-19a16.2 ENSDARG00000058794 8 0.98 - - - - - - 0.980 - - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
75. csrp3 ENSDARG00000101706 21 0.98 - - - - - - 0.980 - - cysteine and glycine-rich protein 3 (cardiac LIM protein) [Source:ZFIN;Acc:ZDB-GENE-041010-119]
76. si:ch73-346m18.6 si:ch73-346m18.6 40 0.98 - - - - - - 0.980 - -
77. CABZ01041769.1 CABZ01041769.1 17 0.98 - - - - - - 0.980 - -
78. TRIM14_11 TRIM14_11 2 0.98 - - - - - - 0.980 - -
79. plxnb2b ENSDARG00000036985 1 0.98 - - - - - - 0.980 - - plexin b2b [Source:ZFIN;Acc:ZDB-GENE-080902-1]
80. wisp1a ENSDARG00000054331 26 0.98 - - - - - - 0.980 - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
81. si:dkey-22i16.3 34 0.98 - - - - - - 0.980 - - si:dkey-22i16.3
82. si:ch211-167b20.7 si:ch211-167b20.7 3 0.98 - - - - - - 0.980 - -
83. adprhl1 ENSDARG00000041589 34 0.98 - - - - - - 0.980 - - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
84. si:ch211-239j9.1 ENSDARG00000096319 27 0.98 - - - - - - 0.980 - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
85. CR376723.1 CR376723.1 8 0.98 - - - - - - 0.980 - -
86. AL929092.1_1 ENSDARG00000092217 3 0.98 - - - - - - 0.980 - -
87. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 0.98 - - - - - - 0.980 - - si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
88. dao.2 ENSDARG00000035603 8 0.98 - - - - - - 0.980 - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
89. si:dkey-256e21.1 si:dkey-256e21.1 11 0.98 - - - - - - 0.980 - -
90. CABZ01046283.1 CABZ01046283.1 28 0.98 - - - - - - 0.980 - -
91. si:dkey-20l4.2 si:dkey-20l4.2 110 0.98 - - - - - - 0.980 - -
92. si:ch73-103l1.2 ENSDARG00000096505 17 0.98 - - - - - - 0.980 - - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
93. si:ch211-191a16.5 ENSDARG00000096545 45 0.98 - - - - - - 0.980 - - si:ch211-191a16.5 [Source:ZFIN;Acc:ZDB-GENE-121214-56]
94. zgc:173556 82 0.98 - - - - - - 0.980 - - zgc:173556
95. si:ch211-152l15.4 si:ch211-152l15.4 13 0.98 - - - - - - 0.980 - -
96. si:dkey-27p18.3 ENSDARG00000092228 38 0.98 - - - - - - 0.980 - - si:dkey-27p18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-287]
97. CR391998.1 ENSDARG00000091817 15 0.98 - - - - - - 0.980 - - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
98. si:ch211-145h19.2 7 0.98 - - - - - - 0.980 - - si:ch211-145h19.2
99. si:dkey-47k20.7 ENSDARG00000056014 1 0.98 - - - - - - 0.980 - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
100. si:dkey-251i8.2 si:dkey-251i8.2 2 0.98 - - - - - - 0.980 - -

There are 1221 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA