Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atp2b3a

Gene Name Gene ID Reads Annotation
atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]










Genes with expression patterns similar to atp2b3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
2. TUBB8P7_1 TUBB8P7_1 2722 3.64 0.913 0.868 - - - 0.965 0.894 - -
3. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 3.602 0.858 0.857 - - - 0.935 0.952 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
4. rab3ab ENSDARG00000043835 1267 3.59 0.857 0.806 - - - 0.966 0.961 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
5. cdk5r1b ENSDARG00000045087 2075 3.554 0.887 0.848 - - - 0.879 0.940 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
6. ppp3ca ENSDARG00000004988 615 3.534 0.891 0.888 - - - 0.850 0.905 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
7. mllt11 ENSDARG00000071026 2518 3.502 0.869 0.784 - - - 0.963 0.886 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
8. snap25a ENSDARG00000020609 4537 3.493 0.879 0.717 - - - 0.969 0.928 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
9. gap43 ENSDARG00000099744 4114 3.486 0.912 0.707 - - - 0.910 0.957 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
10. adam11 ENSDARG00000079204 298 3.438 0.867 0.819 - - - 0.820 0.932 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
11. adcyap1b ENSDARG00000027740 1539 3.431 0.898 0.835 - - - 0.899 0.799 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
12. rtn1b ENSDARG00000021143 1682 3.413 0.808 0.762 - - - 0.953 0.890 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
13. eno2 ENSDARG00000014287 2162 3.406 0.851 0.731 - - - 0.914 0.910 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
14. zic2b ENSDARG00000037178, ENSDARG00000112354 993 3.348 0.849 0.815 - - - 0.847 0.837 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
15. C7H4orf48 C7H4orf48 1455 3.32 0.735 0.786 - - - 0.951 0.848 - -
16. Sep-03 Sep-03 1124 3.3 0.769 0.864 - - - 0.866 0.801 - -
17. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 3.288 0.772 0.812 - - - 0.781 0.923 - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
18. irx1b ENSDARG00000056594 2224 3.282 0.798 0.738 - - - 0.789 0.957 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
19. nbeaa ENSDARG00000070080 862 3.256 0.794 0.768 - - - 0.713 0.981 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
20. EPB41L1 EPB41L1 1896 3.249 0.745 0.736 - - - 0.818 0.950 - -
21. cspg5a ENSDARG00000069981 1699 3.241 0.785 0.805 - - - 0.721 0.930 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
22. nadl1.2 695 3.212 0.901 0.701 - - - 0.765 0.845 - - neural adhesion molecule L1.2, transcript variant X1
23. atp6ap1a ENSDARG00000041417 898 3.142 0.714 0.790 - - - 0.803 0.835 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
24. rheb ENSDARG00000090213 1432 3.088 0.728 0.789 - - - 0.716 0.855 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
25. amph ENSDARG00000007663 599 2.834 0.875 - - - - 0.974 0.985 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
26. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.827 0.936 - - - - 0.961 0.930 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
27. stx1b ENSDARG00000000503 2724 2.827 0.895 - - - - 0.954 0.978 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
28. fez1 ENSDARG00000023174 701 2.82 0.919 - - - - 0.966 0.935 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
29. TUSC5 TUSC5 1436 2.809 0.907 - - - - 0.942 0.960 - -
30. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.805 0.884 - - - - 0.944 0.977 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
31. stmn2a ENSDARG00000033234 2272 2.796 0.915 - - - - 0.925 0.956 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
32. slc32a1 ENSDARG00000059775 1092 2.792 0.879 - - - - 0.947 0.966 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
33. slc1a2b ENSDARG00000102453 3136 2.786 0.897 - - - - 0.927 0.962 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
34. MAP1A MAP1A 847 2.783 0.879 - - - - 0.952 0.952 - -
35. scn8aa ENSDARG00000005775 792 2.768 0.893 - - - - 0.900 0.975 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
36. slc1a3a ENSDARG00000104431 9888 2.757 0.938 - - - - 0.934 0.885 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
37. nova1 ENSDARG00000020178 4129 2.752 - 0.860 - - - 0.913 0.979 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
38. stmn4l ENSDARG00000043932 654 2.752 0.841 - - - - 0.987 0.924 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
39. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.75 0.915 - - - - 0.895 0.940 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
40. sh3gl2 sh3gl2 1305 2.748 0.840 - - - - 0.966 0.942 - -
41. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.745 0.859 - - - - 0.930 0.956 - -
42. scrt2 ENSDARG00000056175 4331 2.742 0.782 - - - - 0.990 0.970 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
43. cadm3 ENSDARG00000057013 1545 2.741 0.873 - - - - 0.948 0.920 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
44. SV2B SV2B 208 2.74 0.846 - - - - 0.990 0.904 - -
45. stmn1b ENSDARG00000033655 9491 2.737 0.868 - - - - 0.916 0.953 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
46. tuba1c ENSDARG00000055216 8384 2.733 0.824 - - - - 0.942 0.967 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
47. pcdh1gc5 ENSDARG00000104826 10052 2.73 0.846 - - - - 0.954 0.930 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
48. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.727 0.864 - - - - 0.884 0.979 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
49. lhx5 ENSDARG00000057936 785 2.724 0.878 - - - - 0.938 0.908 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
50. necap1 ENSDARG00000020798 612 2.723 0.862 - - - - 0.935 0.926 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
51. stmn2b ENSDARG00000070537 1586 2.718 0.904 - - - - 0.907 0.907 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
52. INA INA 950 2.709 0.827 - - - - 0.920 0.962 - -
53. calb1 ENSDARG00000031598 252 2.708 0.891 - - - - 0.911 0.906 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
54. spock2 ENSDARG00000075393 791 2.703 0.855 - - - - 0.909 0.939 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
55. aplp1 ENSDARG00000098368 2317 2.701 0.868 0.884 - - - 0.949 - - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
56. dpysl3 ENSDARG00000002587 4381 2.692 0.874 - - - - 0.861 0.957 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
57. rbfox3 rbfox3 1443 2.688 0.859 - - - - 0.850 0.979 - -
58. nrn1a ENSDARG00000071860 1311 2.685 0.872 - - - - 0.912 0.901 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
59. adam23a ENSDARG00000062323 580 2.685 0.842 - - - - 0.980 0.863 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
60. kif5aa ENSDARG00000098936 2428 2.683 0.887 0.867 - - - 0.929 - - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
61. clstn3 ENSDARG00000073883 590 2.676 0.840 - - - - 0.869 0.967 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
62. msi1 ENSDARG00000010710 2634 2.676 - 0.871 - - - 0.836 0.969 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
63. atp6v0cb ENSDARG00000036577 3472 2.674 0.786 - - - - 0.924 0.964 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
64. vamp1 ENSDARG00000031283 3094 2.671 0.873 0.866 - - - 0.932 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
65. MAPK8IP1_1 MAPK8IP1_1 186 2.666 0.859 - - - - 0.916 0.891 - -
66. sncgb ENSDARG00000109715 1014 2.662 0.765 - - - - 0.967 0.930 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
67. olfm1b ENSDARG00000014053 1392 2.661 0.791 - - - - 0.905 0.965 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
68. cers6 ENSDARG00000053583 247 2.66 0.789 - - - - 0.967 0.904 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
69. mapk12b ENSDARG00000006409 2246 2.658 0.772 - - - - 0.911 0.975 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
70. stxbp1a ENSDARG00000001994 5154 2.658 - 0.763 - - - 0.960 0.935 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
71. cplx2l ENSDARG00000018997 3975 2.655 0.791 0.889 - - - - 0.975 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
72. zic1 ENSDARG00000015567 2520 2.654 0.935 - - - - 0.886 0.833 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
73. STMN3 ENSDARG00000038465 1009 2.651 0.810 - - - - 0.862 0.979 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
74. SV2A ENSDARG00000059945 1278 2.65 0.891 0.838 - - - - 0.921 - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
75. atp2b3b ENSDARG00000023445 1424 2.649 0.905 - - - - 0.897 0.847 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
76. gfap ENSDARG00000025301 5584 2.647 0.729 - - - - 0.948 0.970 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
77. plp1a ENSDARG00000103732 3544 2.647 0.797 - - - - 0.919 0.931 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
78. adarb1a ENSDARG00000041609 476 2.646 0.830 - - - - 0.830 0.986 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
79. BX957337.1 BX957337.1 1685 2.644 0.740 - - - - 0.941 0.963 - -
80. rusc1 ENSDARG00000078125 617 2.643 0.890 - - - - 0.817 0.936 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
81. syt11a ENSDARG00000057913 1145 2.64 0.853 - - - - 0.885 0.902 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
82. nmnat2 ENSDARG00000004580 370 2.64 0.901 - - - - 0.945 0.794 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
83. SKOR2 SKOR2 1041 2.637 0.834 - - - - 0.837 0.966 - -
84. pcsk1nl ENSDARG00000076170 1232 2.636 0.809 - - - - 0.904 0.923 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
85. myt1b ENSDARG00000102879 5411 2.629 0.744 - - - - 0.922 0.963 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
86. gsx1 ENSDARG00000035735 1243 2.628 0.780 - - - - 0.879 0.969 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
87. dnajc5aa ENSDARG00000042948 2885 2.626 0.807 - - - - 0.857 0.962 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
88. zic4 ENSDARG00000031307 1228 2.624 0.948 - - - - 0.889 0.787 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
89. pax6a ENSDARG00000103379 3061 2.622 0.741 - - - - 0.908 0.973 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
90. pou4f1 ENSDARG00000005559 821 2.619 0.911 - - - - 0.781 0.927 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
91. gabra5 ENSDARG00000070730 156 2.619 0.775 - - - - 0.888 0.956 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
92. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.615 0.844 - - - - 0.878 0.893 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
93. ndrg4 ENSDARG00000103937 1234 2.613 0.803 - - - - 0.858 0.952 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
94. map7d2a ENSDARG00000068480 513 2.611 0.849 - - - - 0.841 0.921 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
95. prrt1 ENSDARG00000062208 368 2.602 0.880 - - - - 0.825 0.897 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
96. syt9a ENSDARG00000003994 298 2.6 0.903 - - - - 0.847 0.850 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
97. sept5a ENSDARG00000013843 1206 2.6 0.925 - - - - 0.855 0.820 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
98. SPOCK1 ENSDARG00000074644 794 2.596 0.809 - - - - 0.833 0.954 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
99. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 2.592 0.878 - - - - 0.884 0.830 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
100. gng3 ENSDARG00000009553 2530 2.589 0.882 - - - - 0.753 0.954 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]

There are 1938 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA