Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for aspscr1_1

Gene Name Gene ID Reads Annotation
aspscr1_1 ENSDARG00000105321 4 alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]










Genes with expression patterns similar to aspscr1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. aspscr1_1 ENSDARG00000105321 4 4 1.000 - 1.000 1.000 - - - - 1.000 alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]
2. GABRA3 ENSDARG00000090883 5 1.929 1.000 - 0.929 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
3. atf2 ENSDARG00000023903 3 1.806 - - 0.851 - - - - - 0.955 activating transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030911-8]
4. si:ch211-163b2.2 4 1.764 - - 0.764 - - - - - 1.000 si:ch211-163b2.2, transcript variant X1
5. ndrg1b ENSDARG00000010420 116 1 1.000 - - - - - - - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
6. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - - - - - - - - 1.000 si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
7. gabrr2a ENSDARG00000052982 21 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
8. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - 1.000 - - - - -
9. ADORA3 ENSDARG00000059899 5 1 - - - - - - - - 1.000 adenosine A3 receptor [Source:HGNC Symbol;Acc:HGNC:268]
10. si:dkey-238o14.1 ENSDARG00000100099 1 1 1.000 - - - - - - - - si:dkey-238o14.1 [Source:ZFIN;Acc:ZDB-GENE-081103-10]
11. dlg5b dlg5b 3 1 - - - - - - - - 1.000
12. ncanb ENSDARG00000005783 22 1 1.000 - - - - - - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
13. HIST2H4A HIST2H4A 33 1 - - - - - - - - 1.000
14. crebl2 ENSDARG00000104049 16 1 - - - - - - - - 1.000 cAMP responsive element binding protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-456]
15. si:ch211-194e1.8 si:ch211-194e1.8 14 1 - - - 1.000 - - - - -
16. CU896645.1 CU896645.1 10 1 1.000 - - - - - - - -
17. zfp64 ENSDARG00000061147 44 1 1.000 - - - - - - - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
18. HIST2H4B HIST2H4B 9 1 1.000 - - - - - - - -
19. efr3ba ENSDARG00000033516 19 1 1.000 - - - - - - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
20. CLTCL1_1 CLTCL1_1 1 1 1.000 - - - - - - - -
21. si:ch73-186j5.4 si:ch73-186j5.4 70 1 - - - 1.000 - - - - -
22. BX248120.1 BX248120.1 4 1 1.000 - - - - - - - -
23. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - - 1.000 - - - - -
24. BSN_1 BSN_1 21 1 1.000 - - - - - - - -
25. SGCZ ENSDARG00000106258 2 1 - - - 1.000 - - - - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
26. bcat1 ENSDARG00000045568 39 1 1.000 - - - - - - - - branched chain amino-acid transaminase 1, cytosolic [Source:ZFIN;Acc:ZDB-GENE-030131-9358]
27. CT583709.2 CT583709.2 55 1 1.000 - - - - - - - -
28. zgc:174710 13 1 1.000 - - - - - - - - zgc:174710
29. KCNIP4 ENSDARG00000088100 86 1 1.000 - - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
30. CABZ01069020.1 ENSDARG00000105806 19 1 1.000 - - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
31. BX324215.4 BX324215.4 3 1 - - - - - - - - 1.000
32. si:dkey-59l11.10 ENSDARG00000034095 1 1 - - - - - - - - 1.000 si:dkey-59l11.10 [Source:ZFIN;Acc:ZDB-GENE-120703-17]
33. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - 1.000 - - - - -
34. BX119910.12 BX119910.12 1 1 - - - - - - - - 1.000
35. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - - - 1.000 - - - - -
36. CR936977.1 ENSDARG00000100144 4 1 - - - 1.000 - - - - -
37. si:ch211-197k17.3 ENSDARG00000096214 2 1 1.000 - - - - - - - - si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
38. si:dkey-115f9.3 7 1 - - - - - - - - 1.000 si:dkey-115f9.3, transcript variant X2
39. si:ch211-170h2.3 si:ch211-170h2.3 3 1 - - - 1.000 - - - - -
40. pygl ENSDARG00000002197 192 1 1.000 - - - - - - - - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
41. SLC2A13 SLC2A13 74 1 1.000 - - - - - - - -
42. zgc:165409_1 ENSDARG00000091385 65 1 1.000 - - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
43. pdcl ENSDARG00000009480 12 1 1.000 - - - - - - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
44. gfra1a ENSDARG00000099732 33 1 - - 1.000 - - - - - - gdnf family receptor alpha 1a [Source:ZFIN;Acc:ZDB-GENE-010226-2]
45. NOX4 3 1 - - - 1.000 - - - - - NADPH oxidase 4
46. SNORA63 SNORA63 7 1 1.000 - - - - - - - -
47. CU104697.1 CU104697.1 19 1 - - 1.000 - - - - - -
48. tceanc2 ENSDARG00000062919 32 1 1.000 - - - - - - - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
49. chrm2a ENSDARG00000098612 5 1 1.000 - - - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
50. spata20 ENSDARG00000013880 46 1 1.000 - - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
51. il17a/f3 ENSDARG00000041976 2 1 - - - 1.000 - - - - - interleukin 17a/f3 [Source:ZFIN;Acc:ZDB-GENE-041001-192]
52. DNER ENSDARG00000061031 123 1 1.000 - - - - - - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
53. lyve1a ENSDARG00000075833 25 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1a [Source:ZFIN;Acc:ZDB-GENE-031118-138]
54. slc9a3.2 ENSDARG00000036722 31 1 - - - - - - - - 1.000 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
55. BX469910.2 ENSDARG00000096127 6 1 1.000 - - - - - - - -
56. pex10 ENSDARG00000041511 52 1 1.000 - - - - - - - - peroxisomal biogenesis factor 10 [Source:ZFIN;Acc:ZDB-GENE-041010-71]
57. BTBD17_1 BTBD17_1 42 1 1.000 - - - - - - - -
58. zgc:112399 1 1 - - - 1.000 - - - - - zgc:112399
59. zgc:113340 ENSDARG00000097473 2 1 - - - 1.000 - - - - - zgc:113340 [Source:ZFIN;Acc:ZDB-GENE-050327-34]
60. si:ch211-264e16.2 ENSDARG00000094415 4 1 - - - 1.000 - - - - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
61. si:dkeyp-80d11.12 ENSDARG00000101728 4 1 - - - - - - - - 1.000 si:dkeyp-80d11.12 [Source:ZFIN;Acc:ZDB-GENE-070424-273]
62. snapc1a ENSDARG00000029569 25 1 1.000 - - - - - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
63. U1_28 U1_28 1 1 - - - 1.000 - - - - -
64. cnn1a ENSDARG00000017193 6 1 - - - 1.000 - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
65. taar16a ENSDARG00000054237 1 1 1.000 - - - - - - - - trace amine associated receptor 16a [Source:ZFIN;Acc:ZDB-GENE-100514-1]
66. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 1 1.000 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
67. GALNT9 ENSDARG00000006832 120 1 1.000 - - - - - - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
68. CABZ01040076.1 CABZ01040076.1 1 1 - - - - - - - - 1.000
69. AL935272.2 AL935272.2 37 1 1.000 - - - - - - - -
70. zgc:114037_4 57 1 1.000 - - - - - - - - zgc:114037
71. HEATR5B ENSDARG00000059116 3 1 - - - 1.000 - - - - - HEAT repeat containing 5B [Source:ZFIN;Acc:ZDB-GENE-130530-676]
72. si:ch211-10p21.1 si:ch211-10p21.1 6 1 - - 1.000 - - - - - -
73. crispld1a ENSDARG00000077275 7 1 - - - 1.000 - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
74. CR391962.1 CR391962.1 31 1 1.000 - - - - - - - -
75. gpr12 ENSDARG00000062934 7 1 1.000 - - - - - - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
76. CR545462.1 CR545462.1 1 1 - - - 1.000 - - - - -
77. six6a ENSDARG00000025187 40 1 1.000 - - - - - - - - SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]
78. WDPCP ENSDARG00000074590 35 1 1.000 - - - - - - - - WD repeat containing planar cell polarity effector [Source:ZFIN;Acc:ZDB-GENE-100405-4]
79. aqp10b ENSDARG00000058678 1 1 - - - 1.000 - - - - - aquaporin 10b [Source:ZFIN;Acc:ZDB-GENE-060503-57]
80. chrna9 ENSDARG00000054680 4 1 1.000 - - - - - - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
81. TRIM46 TRIM46 73 1 1.000 - - - - - - - -
82. cpne5 cpne5 16 1 1.000 - - - - - - - -
83. si:dkey-14d8.19 si:dkey-14d8.19 12 1 1.000 - - - - - - - -
84. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 1.000 - - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
85. slc47a2 2 1 - - - 1.000 - - - - - solute carrier family 47 (multidrug and toxin extrusion), member 2
86. MPST MPST 6 1 - - - 1.000 - - - - -
87. C20H2orf70 C20H2orf70 8 1 1.000 - - - - - - - -
88. si:ch211-167j6.3 ENSDARG00000095504 5 1 1.000 - - - - - - - - si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]
89. BX601644.1 ENSDARG00000090632 2 1 - - - 1.000 - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
90. si:ch211-222k6.2 ENSDARG00000087046 144 1 1.000 - - - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
91. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - - - 1.000 - - - - -
92. si:ch211-122l24.2 si:ch211-122l24.2 1 1 1.000 - - - - - - - -
93. CNTNAP1 ENSDARG00000074524 73 1 1.000 - - - - - - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
94. BX897747.1 ENSDARG00000117746 11 1 1.000 - - - - - - - -
95. zgc:112965 ENSDARG00000007787 5 1 1.000 - - - - - - - - zgc:112965 [Source:ZFIN;Acc:ZDB-GENE-050522-10]
96. RBM11 ENSDARG00000090202 15 1 - - - - - - - - 1.000 RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
97. UNC5CL UNC5CL 4 1 - - - - - - - - 1.000
98. fam73b 76 1 1.000 - - - - - - - - family with sequence similarity 73, member B
99. TMEM100_1 TMEM100_1 44 1 1.000 - - - - - - - -
100. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 1 1.000 - - - - - - - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]

There are 435 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA