Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for aspm

Gene Name Gene ID Reads Annotation
aspm ENSDARG00000103754 5708 abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]










Genes with expression patterns similar to aspm

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. aspm ENSDARG00000103754 5708 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
2. puf60a ENSDARG00000032175 5618 3.052 - - 0.725 0.799 0.767 - 0.761 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
3. prmt1 ENSDARG00000010246 11311 2.463 - - 0.752 - - - 0.768 - 0.943 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
4. ppig ENSDARG00000044431 3427 2.422 - 0.850 0.757 - - - - - 0.815 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
5. whsc1l1 8544 2.414 0.844 - - 0.779 - - 0.791 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
6. hnrnpub ENSDARG00000004735 16496 2.387 - - - 0.786 0.786 - 0.815 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
7. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 2.377 - 0.833 - 0.743 - - 0.801 - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
8. ptenb ENSDARG00000056623 5783 2.371 - - - - - 0.749 0.777 - 0.845 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
9. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.343 - - - 0.826 0.734 - 0.783 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
10. top2b ENSDARG00000034195 3715 2.312 - 0.725 0.797 - - - 0.790 - - DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
11. ppp2r2d ENSDARG00000102009 5710 2.308 - - - - - 0.727 0.742 - 0.839 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
12. ilf3b ENSDARG00000105177 9473 2.307 - - - 0.736 - - 0.758 - 0.813 interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
13. dpp3 ENSDARG00000020676 2393 2.29 - 0.743 - - - - 0.765 - 0.782 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
14. CPEB2 ENSDARG00000052604 2646 2.283 - 0.724 - - - 0.772 0.787 - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
15. tmpob ENSDARG00000022978 8121 2.278 - - 0.833 0.717 - - 0.728 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
16. CR936437.1 CR936437.1 6465 2.274 - - 0.819 - 0.733 - 0.722 - -
17. ANKRD11 ENSDARG00000051886 10024 2.27 - - 0.749 - 0.729 - 0.792 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
18. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.237 - - 0.769 - - 0.753 0.715 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
19. rbpjb ENSDARG00000052091 3122 2.23 - - 0.760 - - 0.723 0.747 - - recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]
20. tfdp1b ENSDARG00000016304 3071 2.228 - 0.709 - - - - - 0.720 0.799 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
21. fzd3a ENSDARG00000021664 1958 2.18 - - 0.752 0.706 - - 0.722 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
22. tbl1xr1b ENSDARG00000008966 2203 1.689 0.817 - - - - - 0.872 - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
23. srsf2a ENSDARG00000057484 25721 1.672 - - - 0.801 - - - - 0.871 serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
24. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.663 - - 0.780 - - - - - 0.883 zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
25. cpsf3 ENSDARG00000027649 6897 1.648 - - - - - 0.760 - - 0.888 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
26. elmo1 ENSDARG00000098753 6966 1.647 - 0.732 - - - - - - 0.915 engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
27. tgif1 ENSDARG00000059337 4020 1.643 - - 0.798 - - - 0.845 - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
28. u2af2b ENSDARG00000011740 6946 1.639 - - 0.793 - - - 0.846 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
29. rbb4 rbb4 15541 1.619 - - 0.857 - - - 0.762 - -
30. kdm1a ENSDARG00000060679 6152 1.618 - - 0.807 - - - 0.811 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
31. top1l ENSDARG00000070545 40529 1.606 - - - 0.765 - - 0.841 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
32. plagx ENSDARG00000036855 3768 1.602 - - 0.847 - - - 0.755 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
33. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.6 - - 0.803 - - - 0.797 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
34. hnrpl 6412 1.592 - - 0.818 - - - 0.774 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
35. akirin2 ENSDARG00000058729 13245 1.587 - - - - - 0.736 0.851 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
36. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.587 - - 0.759 - - - 0.828 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
37. pim1 ENSDARG00000100020 7035 1.585 - - - - - 0.828 0.757 - - Pim-1 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-061013-139]
38. cltcb ENSDARG00000090716 5544 1.584 - - - - - 0.777 0.807 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
39. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.582 - - - 0.722 - - 0.860 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
40. pbx4 ENSDARG00000052150 35676 1.58 0.777 - - - - - 0.803 - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
41. snrpe ENSDARG00000033175 7462 1.579 - - - - - - 0.775 - 0.804 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
42. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.577 - - 0.735 - - - 0.842 - - hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
43. MKI67 ENSDARG00000091150 11038 1.574 - - - 0.807 - - 0.767 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
44. si:ch211-51e12.7 ENSDARG00000045914 9598 1.572 - - - - - 0.736 - - 0.836 si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
45. fam60al 2846 1.57 - - 0.776 - - - 0.794 - - family with sequence similarity 60, member A, like
46. nr2f2 ENSDARG00000040926 5213 1.57 - - - - - - 0.738 - 0.832 nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
47. nucks1b ENSDARG00000012777 4468 1.569 - - 0.764 - - - 0.805 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
48. rtca ENSDARG00000002215 3558 1.566 - - 0.791 - - - 0.775 - - RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
49. LEPROTL1 ENSDARG00000104871 3019 1.566 - 0.769 - - - - 0.797 - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
50. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.559 - - 0.804 - - - 0.755 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
51. TNRC6A ENSDARG00000079688 14433 1.556 - - 0.730 - - - 0.826 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
52. snrpf ENSDARG00000105037 10241 1.555 - - - - - 0.766 0.789 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
53. hdac1 ENSDARG00000015427 19804 1.551 - - 0.822 - - 0.729 - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
54. ylpm1 ENSDARG00000043680 7676 1.549 - - 0.805 - - - 0.744 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
55. mpnd ENSDARG00000061989 817 1.549 0.744 - - - - - - - 0.805 MPN domain containing [Source:ZFIN;Acc:ZDB-GENE-060929-1162]
56. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.548 - - - - 0.759 - 0.789 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
57. arl14ep ENSDARG00000001210 3029 1.547 - 0.759 - - - - - - 0.788 ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
58. apex1 ENSDARG00000045843 6345 1.546 - - 0.789 - - - 0.757 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
59. pou2f1b ENSDARG00000007996 2172 1.546 - - 0.715 - - - - - 0.831 POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
60. SCAF8 1618 1.546 - 0.839 - - - - 0.707 - - SR-related CTD-associated factor 8, transcript variant X3
61. srrm1 ENSDARG00000001244 4972 1.543 - - 0.810 - - - 0.733 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
62. nup188 ENSDARG00000030022 2398 1.54 - - - - - - 0.730 - 0.810 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
63. SNRPG ENSDARG00000099667 18697 1.538 - - - 0.754 - - 0.784 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
64. SSBP4 ENSDARG00000056483 5156 1.538 - - 0.788 - - - 0.750 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
65. pfn2l ENSDARG00000012682 21690 1.538 - - - 0.716 - - 0.822 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
66. hcfc1b ENSDARG00000012519 3633 1.536 - - - 0.806 - - 0.730 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
67. sumo3b ENSDARG00000035993 3414 1.535 - - 0.816 - - - 0.719 - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
68. srsf4 ENSDARG00000105293 9657 1.534 - - - 0.732 - - 0.802 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
69. acin1a ENSDARG00000054290 14023 1.533 - - - 0.721 - - 0.812 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
70. MDC1 ENSDARG00000086764 1851 1.529 - 0.783 - 0.746 - - - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
71. hmgb1b ENSDARG00000030479 10398 1.529 - - 0.790 - - - 0.739 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
72. kif22 ENSDARG00000102624 3694 1.528 - - 0.743 - - - 0.785 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
73. fen1 ENSDARG00000011404 3358 1.523 - - 0.804 - - - 0.719 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
74. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.518 - - 0.808 0.710 - - - - - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
75. bcl2_1 bcl2_1 1185 1.515 - 0.805 - - - - 0.710 - -
76. jam3b ENSDARG00000061794 5655 1.514 - - 0.703 - - - 0.811 - - junctional adhesion molecule 3b [Source:ZFIN;Acc:ZDB-GENE-030131-441]
77. usp10 ENSDARG00000103422 4247 1.513 - - 0.731 - - - 0.782 - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
78. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.513 - - 0.730 - - - 0.783 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
79. atf4b2 atf4b2 4734 1.513 - - - - 0.749 - 0.764 - -
80. zswim5 ENSDARG00000055900 4243 1.512 - - - - 0.753 - 0.759 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
81. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.512 - - - - 0.754 - 0.758 - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
82. ubr5 ENSDARG00000018192 9267 1.511 0.753 - 0.758 - - - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
83. igf2bp1 ENSDARG00000061478 22924 1.511 - - - 0.718 - - - - 0.793 insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
84. slbp ENSDARG00000100558 3405 1.509 - - 0.788 - 0.721 - - - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
85. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.505 - - 0.744 - - - - - 0.761 erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
86. kpna4 ENSDARG00000023190 2505 1.505 - - - - - 0.708 - - 0.797 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
87. ctnnb1 ENSDARG00000014571 12004 1.505 - 0.708 0.797 - - - - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
88. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 1.505 - - - 0.730 - - 0.775 - - exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
89. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.504 - - - - - 0.768 0.736 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
90. btg2 ENSDARG00000020298 6616 1.503 - - - 0.776 - - 0.727 - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
91. mynn ENSDARG00000007271 991 1.502 - 0.774 - - - - 0.728 - - myoneurin [Source:ZFIN;Acc:ZDB-GENE-030131-5378]
92. lbr ENSDARG00000014013 4835 1.5 - 0.772 - - - - 0.728 - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
93. wasf3 wasf3 3287 1.498 - - - - - - 0.704 - 0.794
94. CDCA4 ENSDARG00000042319 7918 1.496 - - 0.751 0.745 - - - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
95. zgc:77262 ENSDARG00000044545 5563 1.495 - - 0.768 - - - 0.727 - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
96. cspg5a ENSDARG00000069981 1699 1.491 - - 0.778 0.713 - - - - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
97. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.49 - - 0.767 - - - 0.723 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
98. FP085405.1 FP085405.1 5189 1.489 0.730 - - - - - 0.759 - -
99. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.488 - - 0.774 - - 0.714 - - - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
100. elof1 ENSDARG00000099453 6176 1.485 - - 0.711 - - - 0.774 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]

There are 1025 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA