Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for arhgef1a

Gene Name Gene ID Reads Annotation
arhgef1a ENSDARG00000040380 239 Rho guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-030722-5]










Genes with expression patterns similar to arhgef1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgef1a ENSDARG00000040380 239 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-030722-5]
2. shc2 ENSDARG00000062080, ENSDARG00000111448 426 2.291 - 0.725 - 0.802 - - 0.764 - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-666]
3. zgc:193711 ENSDARG00000101901 503 1.729 - 0.906 - 0.823 - - - - - zgc:193711 [Source:ZFIN;Acc:ZDB-GENE-081022-34]
4. zgc:158263 ENSDARG00000037267 516 1.684 - 0.883 - 0.801 - - - - - zgc:158263 [Source:ZFIN;Acc:ZDB-GENE-070112-2262]
5. si:dkey-106c17.3 93 1.65 - - - 0.834 - 0.816 - - - si:dkey-106c17.3
6. ttc19 ENSDARG00000074435 249 1.618 - 0.818 - 0.800 - - - - - tetratricopeptide repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-070912-490]
7. MIIP ENSDARG00000088346 382 1.604 - 0.902 - 0.702 - - - - - migration and invasion inhibitory protein [Source:ZFIN;Acc:ZDB-GENE-130620-1]
8. pdcd2l ENSDARG00000002754 417 1.598 - 0.781 - 0.817 - - - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
9. cables1 ENSDARG00000099395 361 1.597 - 0.746 - 0.851 - - - - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
10. zgc:110821 ENSDARG00000077085 210 1.587 - - - 0.742 - - - 0.845 - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
11. TNFRSF11B ENSDARG00000098377 98 1.576 - 0.756 - - - - - 0.820 - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
12. tctex1d2 ENSDARG00000054255 320 1.571 - 0.779 - - - 0.792 - - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
13. mogat3b ENSDARG00000003635 394 1.537 - 0.802 - - - - - 0.735 - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
14. rbm4.1 ENSDARG00000036386 625 1.536 - - - - - 0.764 0.772 - - RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
15. vhl ENSDARG00000070617 663 1.522 0.742 0.780 - - - - - - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
16. dpm1 ENSDARG00000057011, ENSDARG00000112573 1089 1.514 - 0.794 - - - - - 0.720 - dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-115]
17. irf2a ENSDARG00000007387 915 1.506 - 0.745 - - - 0.761 - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
18. rpz2 ENSDARG00000091215 765 1.494 0.747 0.747 - - - - - - - rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
19. haao ENSDARG00000076487 143 1.492 - 0.789 - - - - - 0.703 - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
20. pfkfb3 ENSDARG00000001953 656 1.486 - - - - 0.758 - 0.728 - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
21. tmem177 ENSDARG00000069301, ENSDARG00000113926 601 1.484 - - - - - 0.749 0.735 - - transmembrane protein 177 [Source:ZFIN;Acc:ZDB-GENE-030131-993]
22. CU207301.4 CU207301.4 192 1.48 - - - 0.748 0.732 - - - -
23. bmp7a ENSDARG00000018260 92 1.477 - 0.763 - 0.714 - - - - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
24. UBN2 UBN2 557 1.477 - 0.734 - - - 0.743 - - -
25. zbed4 ENSDARG00000024306, ENSDARG00000110788 513 1.472 - - - - - 0.724 - 0.748 - zinc finger, BED-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-305]
26. klhl12 ENSDARG00000100631 306 1.465 - - - 0.740 - 0.725 - - - kelch-like family member 12 [Source:ZFIN;Acc:ZDB-GENE-041114-205]
27. irak1bp1 ENSDARG00000036903, ENSDARG00000110205 426 1.464 - - - 0.721 - 0.743 - - - interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-272]
28. wu:fc32g12 wu:fc32g12 198 1.448 - 0.738 - - 0.710 - - - -
29. zgc:92664 ENSDARG00000015161 1651 1.439 - 0.708 - - - 0.731 - - - zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
30. rdh8a ENSDARG00000028048 334 1.433 - 0.732 - - - 0.701 - - - retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]
31. nudt15 ENSDARG00000113961 381 1.43 - 0.722 - - - 0.708 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
32. ERCC6L2 ENSDARG00000012403 236 1.42 - - - 0.703 - - - 0.717 - excision repair cross-complementation group 6-like 2 [Source:ZFIN;Acc:ZDB-GENE-110411-274]
33. gk5 ENSDARG00000062864 738 1.415 - - - - 0.702 - - 0.713 - glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
34. cfp ENSDARG00000094451 211 0.94 - - - - - - 0.940 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
35. sfrp5 ENSDARG00000039041 1777 0.92 - 0.920 - - - - - - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
36. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 0.92 - 0.920 - - - - - - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
37. FP236168.1 FP236168.1 150 0.917 - 0.917 - - - - - - -
38. INPP5K INPP5K 137 0.91 - 0.910 - - - - - - -
39. znf395_1 znf395_1 342 0.909 - 0.909 - - - - - - -
40. tmem231 ENSDARG00000042272 557 0.908 - 0.908 - - - - - - - transmembrane protein 231 [Source:ZFIN;Acc:ZDB-GENE-040426-1386]
41. vrk3 ENSDARG00000036056 424 0.907 - 0.907 - - - - - - - vaccinia related kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-246]
42. myoc ENSDARG00000021789 1631 0.9 - 0.900 - - - - - - - myocilin [Source:ZFIN;Acc:ZDB-GENE-050425-2]
43. dguok ENSDARG00000075395, ENSDARG00000111034, ENSDARG00000114526 93 0.897 - 0.897 - - - - - - - deoxyguanosine kinase [Source:ZFIN;Acc:ZDB-GENE-040625-14]
44. atp2c1 ENSDARG00000060197 273 0.896 - 0.896 - - - - - - - ATPase secretory pathway Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-060503-615]
45. xrcc5_1 ENSDARG00000099298 1533 0.895 - 0.895 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
46. INF2 37 0.894 - 0.894 - - - - - - - inverted formin, FH2 and WH2 domain containing
47. lcp1 ENSDARG00000023188 298 0.89 - - - - - - 0.890 - - lymphocyte cytosolic protein 1 (L-plastin) [Source:ZFIN;Acc:ZDB-GENE-991213-5]
48. rab4b ENSDARG00000012177 851 0.888 - - - - - - 0.888 - - RAB4B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040822-15]
49. ank3a ENSDARG00000061736 361 0.885 - 0.885 - - - - - - - ankyrin 3a [Source:ZFIN;Acc:ZDB-GENE-060621-1]
50. ttc12 ENSDARG00000056896 97 0.882 - - - 0.882 - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
51. qsox1 ENSDARG00000039459 320 0.88 - 0.880 - - - - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7019]
52. CCDC135 ENSDARG00000100231 48 0.879 - - - 0.879 - - - - - coiled-coil domain containing 135 [Source:ZFIN;Acc:ZDB-GENE-120406-10]
53. aff3 ENSDARG00000079575 578 0.878 - 0.878 - - - - - - - AF4/FMR2 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030219-193]
54. tsku ENSDARG00000040815 631 0.875 - - - 0.875 - - - - - tsukushi small leucine rich proteoglycan homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-4683]
55. pdia4 ENSDARG00000018491 1914 0.875 - 0.875 - - - - - - - protein disulfide isomerase family A, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5493]
56. FBXL3 FBXL3 1769 0.872 - 0.872 - - - - - - -
57. gdf6b ENSDARG00000005510 106 0.872 - - - 0.872 - - - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
58. magixa ENSDARG00000025108 561 0.87 - 0.870 - - - - - - - MAGI family member, X-linked a [Source:ZFIN;Acc:ZDB-GENE-060503-115]
59. lzts2b ENSDARG00000077207 22 0.869 - - - 0.869 - - - - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
60. klhl42 ENSDARG00000006011 46 0.868 - - - 0.868 - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
61. nab1b ENSDARG00000040700 289 0.867 - - - 0.867 - - - - - NGFI-A binding protein 1b (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-081105-85]
62. il1b ENSDARG00000098700 27 0.866 - - - 0.866 - - - - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
63. kifc3 ENSDARG00000054978 1220 0.866 - 0.866 - - - - - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
64. wisp1a ENSDARG00000054331 26 0.865 - - - 0.865 - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
65. si:ch211-253p18.2 ENSDARG00000092770 21 0.865 - - - 0.865 - - - - - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
66. THEM6_1 ENSDARG00000103914 469 0.865 - 0.865 - - - - - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
67. cygb1 ENSDARG00000099371 63 0.864 - - - 0.864 - - - - - cytoglobin 1 [Source:ZFIN;Acc:ZDB-GENE-020513-1]
68. zgc:112982 ENSDARG00000001829, ENSDARG00000110590, ENSDARG00000111057 2330 0.864 - 0.864 - - - - - - - zgc:112982 [Source:ZFIN;Acc:ZDB-GENE-050306-55]
69. si:dkey-189h5.6 ENSDARG00000095188 50 0.864 - - - 0.864 - - - - - si:dkey-189h5.6 [Source:ZFIN;Acc:ZDB-GENE-060526-230]
70. eve1 ENSDARG00000056012 144 0.864 - - - 0.864 - - - - - even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
71. trim35-29 ENSDARG00000055730 24 0.864 - - - 0.864 - - - - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
72. si:ch211-113a14.15_2 37 0.863 - - - 0.863 - - - - - si:ch211-113a14.15
73. gramd1a ENSDARG00000076689 1148 0.863 - 0.863 - - - - - - - GRAM domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060503-688]
74. efcab2 ENSDARG00000074323 88 0.862 - - - 0.862 - - - - - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
75. nhp2l1a nhp2l1a 993 0.862 - 0.862 - - - - - - -
76. plekha3 ENSDARG00000056601 213 0.861 - 0.861 - - - - - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1252]
77. gdf10b ENSDARG00000073891 116 0.861 - - - 0.861 - - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
78. macrod1 ENSDARG00000029609 66 0.86 - - - 0.860 - - - - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
79. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.86 - - - 0.860 - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
80. dnaaf1 ENSDARG00000012030 58 0.86 - - - 0.860 - - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
81. socs3a ENSDARG00000025428 349 0.859 - - - 0.859 - - - - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
82. cbx8a_1 ENSDARG00000087327 109 0.858 - - - 0.858 - - - - - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
83. ccr12.3 ccr12.3 79 0.858 - - - - - - 0.858 - -
84. zgc:110269 ENSDARG00000012325 691 0.857 - 0.857 - - - - - - - zgc:110269 [Source:ZFIN;Acc:ZDB-GENE-050417-81]
85. tmem67 ENSDARG00000076752 180 0.857 - - - 0.857 - - - - - transmembrane protein 67 [Source:ZFIN;Acc:ZDB-GENE-080716-1]
86. tspan13b ENSDARG00000070479 542 0.857 - - - 0.857 - - - - - tetraspanin 13b [Source:ZFIN;Acc:ZDB-GENE-041010-45]
87. prdx4 ENSDARG00000069013 1150 0.856 - 0.856 - - - - - - - peroxiredoxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1096]
88. si:dkeyp-7b3.1 si:dkeyp-7b3.1 615 0.855 - 0.855 - - - - - - -
89. serpinb1l2 ENSDARG00000070396 37 0.855 - - - 0.855 - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
90. mst4 mst4 1672 0.854 - - - - - - 0.854 - -
91. tfam ENSDARG00000063145 4524 0.854 - 0.854 - - - - - - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
92. ccdc113 ENSDARG00000006981 67 0.853 - - - 0.853 - - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
93. ptgis ENSDARG00000060094, ENSDARG00000113227 82 0.853 - - - 0.853 - - - - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
94. camk4 ENSDARG00000005372 118 0.853 - - - 0.853 - - - - - calcium/calmodulin-dependent protein kinase IV [Source:ZFIN;Acc:ZDB-GENE-050417-76]
95. zgc:194469 ENSDARG00000104367 93 0.852 - - - 0.852 - - - - - zgc:194469 [Source:ZFIN;Acc:ZDB-GENE-081022-114]
96. si:dkey-97l20.5 si:dkey-97l20.5 33 0.852 - - - 0.852 - - - - -
97. c1qtnf5 ENSDARG00000056134 729 0.851 - - - 0.851 - - - - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
98. BX322608.1 ENSDARG00000111690 326 0.851 - - - 0.851 - - - - -
99. rad52 ENSDARG00000005274, ENSDARG00000116828 111 0.851 - - - 0.851 - - - - - RAD52 homolog, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-050731-10]
100. PEG3_15 PEG3_15 113 0.85 - - - 0.850 - - - - -

There are 948 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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