Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arhgap42a

Gene Name Gene ID Reads Annotation
arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]










Genes with expression patterns similar to arhgap42a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
2. ephb4a ENSDARG00000100725 1749 2.459 - 0.743 - - - - - 0.791 0.925 eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
3. CR847925.1 CR847925.1 835 1.864 - - - - - - - 0.907 0.957
4. E2F6 E2F6 1271 1.834 - - - - - - - 0.886 0.948
5. zgc:136439 ENSDARG00000009267 720 1.819 - - - - - - - 0.855 0.964 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
6. SVIL SVIL 2589 1.809 - - - - - - - 0.901 0.908
7. ube3b ENSDARG00000061960 978 1.788 - - - - - - - 0.832 0.956 ubiquitin protein ligase E3B [Source:ZFIN;Acc:ZDB-GENE-060526-231]
8. cstf1 ENSDARG00000044820 1663 1.776 - - - - - - - 0.829 0.947 cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
9. PVRL4 1691 1.776 - - - - - - - 0.831 0.945 poliovirus receptor-related 4
10. narfl ENSDARG00000062216 768 1.756 - - - - - - - 0.787 0.969 nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
11. MYO1D ENSDARG00000036863 768 1.75 - 0.845 - - - - - 0.905 - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
12. gorasp1 gorasp1 3075 1.739 - 0.790 - - - - - - 0.949
13. CABZ01088509.1 CABZ01088509.1 1213 1.724 - 0.769 - - - - - - 0.955
14. trim35-28 ENSDARG00000021021 1380 1.716 - 0.800 - - - - - - 0.916 tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
15. ccdc6b ENSDARG00000017595 828 1.71 - 0.817 - - - - - 0.893 - coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]
16. EPHB3 2215 1.705 - - - - - - 0.819 0.886 - EPH receptor B3
17. NUDT12 ENSDARG00000100813 378 1.694 - - - - - - 0.780 0.914 - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
18. fam219aa ENSDARG00000016396 1788 1.68 - 0.796 - - - - - 0.884 - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
19. asap1a ENSDARG00000029463 1566 1.675 - - - - - - 0.740 0.935 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
20. xrcc5_1 ENSDARG00000099298 1533 1.673 - 0.761 - - - - - 0.912 - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
21. stxbp2 ENSDARG00000007603 1646 1.669 - 0.747 - - - - - - 0.922 syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
22. acadm ENSDARG00000038900 2319 1.667 - 0.907 - - - - - 0.760 - acyl-CoA dehydrogenase medium chain [Source:ZFIN;Acc:ZDB-GENE-040426-1945]
23. kdm1a ENSDARG00000060679 6152 1.654 - 0.841 - - - - - 0.813 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
24. uso1 ENSDARG00000019581 479 1.653 - 0.743 - - - - - 0.910 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
25. crkl ENSDARG00000028699 2966 1.651 - - - - - - 0.798 0.853 - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
26. g6pd ENSDARG00000071065, ENSDARG00000111009 1618 1.65 - 0.724 - - - - - - 0.926 glucose-6-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070508-4]
27. gstm gstm 4064 1.648 - - - - - - - 0.807 0.841
28. kctd6a ENSDARG00000043095 480 1.645 - 0.734 - - - - - 0.911 - potassium channel tetramerization domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-474]
29. sh3gl3a ENSDARG00000013360 3602 1.644 - - - - - - - 0.849 0.795 SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
30. ctnnal1 ENSDARG00000018162 747 1.643 - - - - - - 0.713 0.930 - catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
31. rpz2 ENSDARG00000091215 765 1.642 - 0.721 - - - - - - 0.921 rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
32. aebp1 ENSDARG00000091726 906 1.635 - 0.762 - - - - 0.873 - - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
33. pcsk5b ENSDARG00000060518 883 1.635 - 0.722 - - - - - 0.913 - proprotein convertase subtilisin/kexin type 5b [Source:ZFIN;Acc:ZDB-GENE-070822-7]
34. cbfb ENSDARG00000040917 1422 1.622 - 0.736 - - - - - 0.886 - core-binding factor, beta subunit [Source:ZFIN;Acc:ZDB-GENE-980526-440]
35. si:dkey-19e4.5 ENSDARG00000089886 2562 1.6 - 0.787 - - - - - 0.813 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
36. rfx2 ENSDARG00000013575 1275 1.59 - 0.740 - - - - - 0.850 - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
37. phf20l1 ENSDARG00000017427 1001 1.589 - - - - - - 0.757 0.832 - PHD finger protein 20 like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5837]
38. actr1 ENSDARG00000011611 3879 1.589 - - - - - - - 0.719 0.870 ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
39. prmt1 ENSDARG00000010246 11311 1.588 - - - - - - 0.744 0.844 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
40. nsd1a ENSDARG00000060016 2974 1.584 - - - - - - - 0.803 0.781 nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
41. pdcd6ip ENSDARG00000025269 2522 1.584 - - - - - - 0.720 - 0.864 programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
42. FBXL3 FBXL3 1769 1.576 - 0.774 - - - - 0.802 - -
43. IWS1 2428 1.57 - - - - - - 0.776 0.794 - IWS1, SUPT6H interacting protein, transcript variant X2
44. sphk2 ENSDARG00000069893 1518 1.57 - 0.839 - - - - - 0.731 - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
45. zgc:92664 ENSDARG00000015161 1651 1.562 - 0.746 - - - - 0.816 - - zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
46. rnf121 ENSDARG00000060282 1809 1.561 - - - 0.712 - - - 0.849 - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
47. pum1 ENSDARG00000099256 5017 1.552 - 0.761 - - - - - 0.791 - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
48. ppp1r2 ENSDARG00000054007 1585 1.55 - 0.812 - - - - 0.738 - - protein phosphatase 1, regulatory (inhibitor) subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1814]
49. pcnxl3 pcnxl3 756 1.545 - - - - - - 0.843 0.702 -
50. axin1 ENSDARG00000102964 1710 1.541 - - - - - - 0.735 - 0.806 axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
51. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.538 - 0.717 - - - - - 0.821 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
52. mark2a ENSDARG00000079905 1765 1.533 - 0.739 - - - - - 0.794 - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
53. csnk1a1 ENSDARG00000052674, ENSDARG00000112077 1053 1.532 - 0.777 - - - - 0.755 - - casein kinase 1, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-020419-19]
54. SLC12A6 SLC12A6 883 1.529 - - - - - - 0.710 - 0.819
55. PRKD2 ENSDARG00000104676 1004 1.527 0.701 - - - - - - 0.826 - protein kinase D2 [Source:ZFIN;Acc:ZDB-GENE-131120-142]
56. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.522 - 0.701 - - - - - - 0.821 phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
57. tmed4 ENSDARG00000024954 3476 1.519 - - - - - - - 0.781 0.738 transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
58. b3gnt2l ENSDARG00000068219 1875 1.517 - 0.765 - - - - - - 0.752 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
59. si:dkey-92i17.2 ENSDARG00000093612 707 1.5 - - - - - - 0.708 0.792 - si:dkey-92i17.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6759]
60. slc35b4 ENSDARG00000071087 1030 1.499 - - - 0.714 - - - 0.785 - solute carrier family 35, member B4 [Source:ZFIN;Acc:ZDB-GENE-030131-2457]
61. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.478 - - - - - - 0.761 0.717 - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
62. RPRD1A ENSDARG00000104861 2560 1.475 - - - - - - 0.700 - 0.775 regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]
63. cdc42ep4b ENSDARG00000045036 1295 1.468 - 0.705 - - - - - 0.763 - CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]
64. cbx8b ENSDARG00000098771, ENSDARG00000110903, ENSDARG00000114315 455 1.464 - - - - - - 0.725 0.739 - chromobox homolog 8b [Source:ZFIN;Acc:ZDB-GENE-050522-325]
65. slc25a44b ENSDARG00000035905 968 1.441 - 0.735 - - - - - 0.706 - solute carrier family 25, member 44 b [Source:ZFIN;Acc:ZDB-GENE-050320-89]
66. xrcc5 ENSDARG00000099298 835 1.437 - 0.701 - - - - 0.736 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
67. bckdk ENSDARG00000016904 3775 1.431 - 0.701 - - - - 0.730 - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
68. FBXO46 ENSDARG00000099814 722 1.413 - 0.704 - - - - 0.709 - - F-box protein 46 [Source:HGNC Symbol;Acc:HGNC:25069]
69. ptpn2a ENSDARG00000016481 493 0.977 - - - - - - - - 0.977 protein tyrosine phosphatase, non-receptor type 2, a [Source:ZFIN;Acc:ZDB-GENE-040426-1196]
70. mpv17 ENSDARG00000032431 1225 0.975 - - - - - - - - 0.975 MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
71. C25H11orf24 C25H11orf24 1011 0.974 - - - - - - - - 0.974
72. coil ENSDARG00000040070 863 0.974 - - - - - - - - 0.974 coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
73. ppp6r2b ENSDARG00000069654 323 0.973 - - - - - - - - 0.973 protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
74. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 0.973 - - - - - - - - 0.973 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
75. phactr4a ENSDARG00000015552 1315 0.973 - - - - - - - - 0.973 phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
76. MON1B_1 MON1B_1 697 0.973 - - - - - - - - 0.973
77. HIP1R HIP1R 490 0.972 - - - - - - - - 0.972
78. RNF5 ENSDARG00000075606 1730 0.971 - - - - - - - - 0.971 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
79. sin3ab ENSDARG00000059812 2140 0.971 - - - - - - - - 0.971 SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
80. prc1a ENSDARG00000100918 1746 0.971 - - - - - - - - 0.971 protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
81. dhrs3b ENSDARG00000044803 2931 0.971 - - - - - - - - 0.971 dehydrogenase/reductase (SDR family) member 3b [Source:ZFIN;Acc:ZDB-GENE-041010-172]
82. PACS1_1 PACS1_1 1264 0.971 - - - - - - - - 0.971
83. twistnb ENSDARG00000024416 1077 0.971 - - - - - - - - 0.971 TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
84. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 0.971 - - - - - - - - 0.971
85. fbxl4 ENSDARG00000026941, ENSDARG00000113167 396 0.97 - - - - - - - - 0.970 F-box and leucine-rich repeat protein 4 [Source:ZFIN;Acc:ZDB-GENE-041114-187]
86. atg4b ENSDARG00000052104 758 0.97 - - - - - - - - 0.970 autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
87. ZNF337_22 ZNF337_22 322 0.97 - - - - - - - - 0.970
88. smim8 ENSDARG00000071040 622 0.97 - - - - - - - - 0.970 small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
89. slc25a23a ENSDARG00000005690 824 0.97 - - - - - - - - 0.970 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
90. panx1a ENSDARG00000025285 352 0.97 - - - - - - - - 0.970 pannexin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-766]
91. CACUL1 ENSDARG00000021885 691 0.97 - - - - - - - - 0.970 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
92. def6b ENSDARG00000044524 99 0.969 - - - - - - - - 0.969 differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
93. mylkb ENSDARG00000004753 95 0.969 - - - - - - - - 0.969 myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
94. sar1b ENSDARG00000103403 1699 0.969 - - - - - - - - 0.969 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
95. pfkfb2a ENSDARG00000023840 184 0.969 - - - - - - - - 0.969 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-040426-966]
96. THEM4 ENSDARG00000061621 364 0.969 - - - - - - - - 0.969 thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
97. U6 U6 931 0.969 - - - - - - - - 0.969
98. sppl2 ENSDARG00000030448 1040 0.968 - - - - - - - - 0.968 signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
99. nudt3b ENSDARG00000042123 311 0.968 - - - - - - - - 0.968 nudix (nucleoside diphosphate linked moiety X)-type motif 3b [Source:ZFIN;Acc:ZDB-GENE-041010-128]
100. stmn4l ENSDARG00000043932 654 0.968 - - - - - - - - 0.968 stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]

There are 1246 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA