Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arhgap39

Gene Name Gene ID Reads Annotation
arhgap39 ENSDARG00000100007 344 Rho GTPase activating protein 39 [Source:ZFIN;Acc:ZDB-GENE-041014-247]










Genes with expression patterns similar to arhgap39

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgap39 ENSDARG00000100007 344 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho GTPase activating protein 39 [Source:ZFIN;Acc:ZDB-GENE-041014-247]
2. pcdh19 ENSDARG00000034344 2378 2.29 - - - - - 0.817 - 0.746 0.727 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
3. si:ch211-10a23.2 ENSDARG00000060656 471 2.27 - 0.706 - - - 0.850 - - 0.714 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
4. celf3a ENSDARG00000034668 2432 2.232 - - - - - 0.706 - 0.727 0.799 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
5. suz12a ENSDARG00000070256 2229 2.217 - 0.740 - - 0.731 0.746 - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
6. tmem169 tmem169 592 1.768 - - - - - 0.927 - 0.841 -
7. her4.3 ENSDARG00000070770 613 1.68 - - - - - 0.879 - 0.801 - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
8. gabrg2 ENSDARG00000053665 434 1.665 - 0.805 - - - 0.860 - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
9. pou3f2a ENSDARG00000070220 817 1.655 - - - - - 0.818 - 0.837 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
10. elavl3 ENSDARG00000014420 8644 1.653 - - - - - 0.821 - 0.832 - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
11. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.645 - - - - - 0.868 0.777 - - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
12. myo9al1 myo9al1 1194 1.645 0.773 - - - - - 0.872 - -
13. si:dkey-1b17.5 ENSDARG00000101425 130 1.644 0.834 0.810 - - - - - - - si:dkey-1b17.5 [Source:ZFIN;Acc:ZDB-GENE-050208-704]
14. apba1b ENSDARG00000074328 254 1.638 - - - 0.740 - 0.898 - - - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
15. tmie ENSDARG00000069423 305 1.636 - 0.774 - - - 0.862 - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
16. CABZ01028287.1 CABZ01028287.1 626 1.633 - - - - - 0.878 - - 0.755
17. si:rp71-15d4.6 si:rp71-15d4.6 95 1.617 - 0.829 - 0.788 - - - - -
18. lhfpl4a ENSDARG00000111810 206 1.616 - - - 0.774 - 0.842 - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
19. nlgn2a ENSDARG00000077329 167 1.608 - 0.795 - - - 0.813 - - - neuroligin 2a [Source:ZFIN;Acc:ZDB-GENE-090918-2]
20. lin7b ENSDARG00000037932 150 1.605 0.761 - - - - 0.844 - - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
21. lpar6a ENSDARG00000062552 1348 1.601 - 0.842 - - - - 0.759 - - lysophosphatidic acid receptor 6a [Source:ZFIN;Acc:ZDB-GENE-061013-343]
22. olfml3a ENSDARG00000061852 139 1.6 - 0.810 - 0.790 - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
23. VASH1 ENSDARG00000092716 33 1.595 - 0.810 - 0.785 - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
24. tmem35 ENSDARG00000052567 5685 1.593 - - - - - 0.888 - - 0.705 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
25. LMTK3 LMTK3 222 1.587 - - - - - 0.812 - 0.775 -
26. gap43 ENSDARG00000099744 4114 1.579 - - - - - - - 0.798 0.781 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
27. SRPK2 446 1.577 - 0.763 - - - 0.814 - - - SRSF protein kinase 2, transcript variant X4
28. CABZ01111990.1 CABZ01111990.1 4374 1.573 - - - - - 0.795 - 0.778 -
29. rnf11b ENSDARG00000040635 242 1.569 - 0.772 - 0.797 - - - - - ring finger protein 11b [Source:ZFIN;Acc:ZDB-GENE-050913-69]
30. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.564 - - - - - 0.824 - 0.740 - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
31. insm1b ENSDARG00000053301 2032 1.564 - - - - - 0.853 - - 0.711 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
32. scamp5 scamp5 797 1.56 - - - - - 0.768 - 0.792 -
33. clvs2 ENSDARG00000053122 1390 1.559 - - - - - - - 0.826 0.733 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
34. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 1.558 0.755 0.803 - - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
35. irx1a ENSDARG00000101831 644 1.557 - - - - - - - 0.826 0.731 iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
36. smarca5 ENSDARG00000052348 15433 1.546 - - - - - 0.826 - - 0.720 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
37. ssbp4 ENSDARG00000056483 10196 1.545 - - - - - 0.740 - 0.805 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
38. arpc5la ENSDARG00000041720 143 1.543 0.757 - - - 0.786 - - - - actin related protein 2/3 complex, subunit 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1453]
39. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.543 - - - - - 0.832 - 0.711 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
40. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.54 - - - - - - - 0.811 0.729 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
41. SLC27A3 SLC27A3 240 1.532 - 0.793 - - 0.739 - - - -
42. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.526 - - - - - 0.810 - - 0.716 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
43. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.525 - 0.728 - - - 0.797 - - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
44. fmn2b ENSDARG00000061778 179 1.524 - - - - - 0.813 - 0.711 - formin 2b [Source:ZFIN;Acc:ZDB-GENE-080225-35]
45. marcksa ENSDARG00000004049 2518 1.522 - - - - - - - 0.794 0.728 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
46. efna3b ENSDARG00000098295 319 1.522 - - - - - 0.794 - 0.728 - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
47. si:ch211-67e16.11 ENSDARG00000095580 635 1.52 0.744 0.776 - - - - - - - si:ch211-67e16.11 [Source:ZFIN;Acc:ZDB-GENE-030131-7044]
48. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.514 - - - - - - - 0.806 0.708 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
49. KHDRBS3 ENSDARG00000101020 408 1.509 - 0.772 - - 0.737 - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
50. tmem136a ENSDARG00000024920 535 1.508 - - - - - 0.785 - 0.723 - transmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
51. KIF3A ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 95 1.506 - 0.783 - - - 0.723 - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
52. aldh3a2a ENSDARG00000028259 591 1.504 - - - 0.729 - - 0.775 - - aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
53. rfx1a ENSDARG00000005883 148 1.504 - - - - - 0.755 - 0.749 - regulatory factor X, 1a (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-070424-94]
54. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.504 - - - - - - - 0.803 0.701 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
55. NHS NHS 409 1.5 0.702 0.798 - - - - - - -
56. nell2b ENSDARG00000062797 854 1.5 - - - - - 0.791 - 0.709 - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
57. rapgef5a ENSDARG00000075271 282 1.5 0.776 - - - 0.724 - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
58. DTX3 DTX3 303 1.499 - - - - 0.722 0.777 - - -
59. si:ch211-202e12.3 401 1.498 - - - - - - - 0.779 0.719 si:ch211-202e12.3, transcript variant X6
60. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.489 - - - - - 0.743 - 0.746 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
61. htra1a ENSDARG00000032831, ENSDARG00000111829 1008 1.486 - 0.781 - - - - 0.705 - - HtrA serine peptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-64]
62. smad3b ENSDARG00000010207 951 1.478 - - - 0.738 - 0.740 - - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
63. ptprsb 1085 1.477 0.720 - - - - 0.757 - - - protein tyrosine phosphatase, receptor type, s, b
64. slc16a6a ENSDARG00000102793 60 1.47 0.745 - - - 0.725 - - - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
65. tuba1c ENSDARG00000055216 8384 1.469 - - - - - - - 0.720 0.749 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
66. amer1 ENSDARG00000079624, ENSDARG00000117033 1370 1.468 - - - 0.753 0.715 - - - - APC membrane recruitment protein 1 [Source:ZFIN;Acc:ZDB-GENE-070719-2]
67. inab ENSDARG00000053248 3239 1.468 - - - - - 0.760 - - 0.708 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
68. zgc:77151 ENSDARG00000054307 120 1.462 - - - 0.759 - - 0.703 - - zgc:77151 [Source:ZFIN;Acc:ZDB-GENE-030131-9097]
69. usp22 ENSDARG00000040407 398 1.459 - 0.716 - - 0.743 - - - - ubiquitin specific peptidase 22 [Source:ZFIN;Acc:ZDB-GENE-060512-211]
70. atp1a3a ENSDARG00000018259 5393 1.457 - - - - - 0.719 - 0.738 - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
71. syngr3a ENSDARG00000014871 405 1.457 - - - - - 0.753 - 0.704 - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
72. bard1 ENSDARG00000076733 40 1.45 0.710 0.740 - - - - - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
73. BCL2L12 BCL2L12 327 1.449 - 0.739 - 0.710 - - - - -
74. TAF15 ENSDARG00000070019 5102 1.436 - - - - - - - 0.725 0.711 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
75. whsc1l1 8544 1.436 - - - - - 0.734 - - 0.702 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
76. helb ENSDARG00000053127 235 1.435 0.734 0.701 - - - - - - - helicase (DNA) B [Source:ZFIN;Acc:ZDB-GENE-030729-16]
77. BX470189.1 ENSDARG00000067658 399 1.435 0.703 - - - - - - 0.732 - uncharacterized LOC100150296 [Source:NCBI gene;Acc:100150296]
78. BSN BSN 463 1.431 - - - - - 0.705 - 0.726 -
79. hmga1b ENSDARG00000070951 377 1.431 - - - - - 0.708 - - 0.723 high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
80. tbcela ENSDARG00000002682 1179 1.43 - - - - 0.704 - 0.726 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
81. znf236 ENSDARG00000095890 410 1.428 - - - 0.705 - 0.723 - - - zinc finger protein 236 [Source:ZFIN;Acc:ZDB-GENE-041111-195]
82. zbtb18 ENSDARG00000028228 3653 1.425 - - - - - - - 0.720 0.705 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
83. RFFL_1 RFFL_1 157 1.421 - - - - - 0.721 - 0.700 -
84. atp6v0a1b ENSDARG00000015174 1052 1.421 - 0.713 - - - 0.708 - - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
85. ebp ENSDARG00000046098 502 0.97 - - - - - - 0.970 - - EBP, cholestenol delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-040718-12]
86. si:ch211-247j9.1 ENSDARG00000079283 217 0.956 - - - - - 0.956 - - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
87. DNER ENSDARG00000061031 123 0.928 - - - - - 0.928 - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
88. pcdh2ac ENSDARG00000099783 325 0.928 - - - - - 0.928 - - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
89. im:7162084 im:7162084 665 0.928 - - - - - 0.928 - - -
90. slc35g2a ENSDARG00000056262 52 0.927 - - - - - 0.927 - - - solute carrier family 35, member G2a [Source:ZFIN;Acc:ZDB-GENE-041114-202]
91. ahsg ahsg 39 0.926 - 0.926 - - - - - - -
92. uck1 ENSDARG00000022218, ENSDARG00000109414 355 0.926 - - - - - - 0.926 - - uridine-cytidine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-113]
93. ak4 ENSDARG00000006546 1528 0.921 - - - 0.921 - - - - - adenylate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2505]
94. slc6a5 ENSDARG00000067964, ENSDARG00000111378 34 0.915 - - - - - 0.915 - - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
95. cux2b ENSDARG00000086345 519 0.915 - - - - - 0.915 - - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
96. cdh7 582 0.915 - - - - - 0.915 - - - cadherin 7, type 2, transcript variant X1
97. rnf11a ENSDARG00000010442 592 0.912 - 0.912 - - - - - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
98. lztr1 ENSDARG00000015905, ENSDARG00000114621 632 0.908 - - - - - - 0.908 - - leucine-zipper-like transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9564]
99. si:dkeyp-104f11.6 ENSDARG00000089158 89 0.906 - - - - - - 0.906 - - si:dkeyp-104f11.6 [Source:ZFIN;Acc:ZDB-GENE-130531-1]
100. chrna2b ENSDARG00000057025 217 0.906 - - - - - 0.906 - - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]

There are 1375 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA