Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ampd1

Gene Name Gene ID Reads Annotation
ampd1 ENSDARG00000033832 221 adenosine monophosphate deaminase 1 (isoform M) [Source:ZFIN;Acc:ZDB-GENE-040426-1906]










Genes with expression patterns similar to ampd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ampd1 ENSDARG00000033832 221 5 - - - - 1.000 1.000 1.000 1.000 1.000 adenosine monophosphate deaminase 1 (isoform M) [Source:ZFIN;Acc:ZDB-GENE-040426-1906]
2. mir133b_1 671 2.479 - - - - - 0.740 0.828 0.911 - microRNA 133b
3. plek ENSDARG00000104325 21 1.706 - - - - 0.936 0.770 - - - pleckstrin [Source:ZFIN;Acc:ZDB-GENE-040426-1506]
4. fgf6a ENSDARG00000009351 799 1.671 - - - - - - 0.833 0.838 - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
5. si:dkey-101n15.3 si:dkey-101n15.3 1 1.666 - - - - 0.936 - 0.730 - -
6. slc25a37 ENSDARG00000073743 31 1.666 - - - - 0.936 - 0.730 - - solute carrier family 25 (mitochondrial iron transporter), member 37 [Source:ZFIN;Acc:ZDB-GENE-031118-202]
7. BX322787.1 ENSDARG00000105779 381 1.613 - - - - - - 0.732 0.881 -
8. pou2f2b pou2f2b 134 1.604 - - - - - - 0.721 0.883 -
9. hspg2 ENSDARG00000076564 3440 1.597 - - - - - - 0.735 0.862 - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
10. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.572 - - - - - - 0.738 0.834 - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
11. BX957297.2 ENSDARG00000105608 194 1.571 - - - - - - 0.712 0.859 -
12. wnt2ba ENSDARG00000005050 11 1.542 - - - - 0.749 - 0.793 - - wingless-type MMTV integration site family, member 2Ba [Source:ZFIN;Acc:ZDB-GENE-030717-2]
13. adss ENSDARG00000002071 5497 1.517 - - - - - - 0.756 0.761 - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
14. si:ch211-113e8.9 ENSDARG00000095065 33 1.508 - - - - - 0.769 0.739 - - si:ch211-113e8.9 [Source:ZFIN;Acc:ZDB-GENE-090313-14]
15. prkcq ENSDARG00000034173 405 1.505 - - - - - - 0.714 0.791 - protein kinase C, theta [Source:ZFIN;Acc:ZDB-GENE-041210-195]
16. cyp2aa7 ENSDARG00000103766 8 1.479 - - - - 0.749 - 0.730 - - cytochrome P450, family 2, subfamily AA, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-071004-48]
17. asb1 ENSDARG00000026635 166 1.474 - - - - - - 0.709 0.765 - ankyrin repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-234]
18. esr2a ENSDARG00000016454 23 1.455 - - - - 0.725 - 0.730 - - estrogen receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030116-2]
19. si:dkey-211a8.1 si:dkey-211a8.1 28 1.45 - - - - - 0.740 0.710 - -
20. si:ch211-3o3.8 si:ch211-3o3.8 2 0.961 - - - - 0.961 - - - -
21. CD44 CD44 11 0.961 - - - - 0.961 - - - -
22. si:dkey-111e8.5 ENSDARG00000093960 28 0.961 - - - - 0.961 - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
23. si:ch211-191n13.1 si:ch211-191n13.1 1 0.961 - - - - 0.961 - - - -
24. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 0.961 - - - - 0.961 - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
25. CABZ01067098.1 CABZ01067098.1 1 0.961 - - - - 0.961 - - - -
26. cacng7a ENSDARG00000063006 2 0.961 - - - - 0.961 - - - - calcium channel, voltage-dependent, gamma subunit 7a [Source:ZFIN;Acc:ZDB-GENE-060503-814]
27. ptchd1 ENSDARG00000018066 3 0.961 - - - - 0.961 - - - - patched domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061220-1]
28. SNORA68 SNORA68 1 0.936 - - - - 0.936 - - - -
29. CABZ01081674.1 CABZ01081674.1 15 0.936 - - - - 0.936 - - - -
30. CABZ01012890.1 CABZ01012890.1 0 0.936 - - - - 0.936 - - - -
31. si:dkeyp-73d8.13 si:dkeyp-73d8.13 0 0.936 - - - - 0.936 - - - -
32. bbs9 ENSDARG00000079217 4 0.936 - - - - 0.936 - - - - Bardet-Biedl syndrome 9 [Source:ZFIN;Acc:ZDB-GENE-081027-4]
33. fnbp1 fnbp1 5 0.936 - - - - 0.936 - - - -
34. pcdh2ab10 ENSDARG00000103906 0 0.936 - - - - 0.936 - - - - protocadherin 2 alpha b 10 [Source:ZFIN;Acc:ZDB-GENE-041118-9]
35. si:dkey-19a16.13 ENSDARG00000095454 0 0.936 - - - - 0.936 - - - - si:dkey-19a16.13 [Source:ZFIN;Acc:ZDB-GENE-110411-2]
36. grk7a ENSDARG00000020602 10 0.936 - - - - 0.936 - - - - G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
37. BX548021.2 BX548021.2 4 0.936 - - - - 0.936 - - - -
38. ANGPT2 ANGPT2 2 0.936 - - - - 0.936 - - - -
39. si:ch211-106n13.3 ENSDARG00000052633 3 0.936 - - - - 0.936 - - - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
40. si:ch211-267e7.11 si:ch211-267e7.11 0 0.936 - - - - 0.936 - - - -
41. si:ch211-121a2.2 ENSDARG00000039682 1240 0.936 - - - - 0.936 - - - - si:ch211-121a2.2 [Source:ZFIN;Acc:ZDB-GENE-070705-21]
42. zdhhc24 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 6 0.936 - - - - 0.936 - - - - zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
43. si:dkey-240n22.2 si:dkey-240n22.2 2 0.936 - - - - 0.936 - - - -
44. CIT_1 CIT_1 6 0.936 - - - - 0.936 - - - -
45. KCNJ3_1 KCNJ3_1 30 0.936 - - - - 0.936 - - - -
46. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 0.936 - - - - 0.936 - - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
47. si:ch211-223a10.3 si:ch211-223a10.3 3 0.936 - - - - 0.936 - - - -
48. olfcw1 ENSDARG00000100604, ENSDARG00000109588 0 0.936 - - - - 0.936 - - - - olfactory receptor C family, w1 [Source:ZFIN;Acc:ZDB-GENE-050522-281]
49. CR626884.3 ENSDARG00000104648 1 0.936 - - - - 0.936 - - - -
50. samsn1b ENSDARG00000078647 8 0.936 - - - - 0.936 - - - - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]
51. si:ch211-175f12.2 ENSDARG00000095831 1 0.936 - - - - 0.936 - - - - si:ch211-175f12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-220]
52. si:dkey-25o1.3 si:dkey-25o1.3 0 0.936 - - - - 0.936 - - - -
53. pip4k2ab ENSDARG00000063544 1 0.936 - - - - 0.936 - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]
54. ZNF835 ZNF835 6 0.936 - - - - 0.936 - - - -
55. alkbh7 ENSDARG00000037906 9 0.936 - - - - 0.936 - - - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
56. BX004816.4 BX004816.4 33 0.936 - - - - 0.936 - - - -
57. CABZ01067232.1 ENSDARG00000057408 1 0.936 - - - - 0.936 - - - - otolin-1-like [Source:NCBI gene;Acc:101886389]
58. WASF3 WASF3 1 0.936 - - - - 0.936 - - - -
59. slc25a15a ENSDARG00000063539 50 0.936 - - - - 0.936 - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
60. si:dkey-197d18.1 si:dkey-197d18.1 4 0.936 - - - - 0.936 - - - -
61. si:ch73-92e20.2 si:ch73-92e20.2 2 0.936 - - - - 0.936 - - - -
62. PSTPIP2 ENSDARG00000089569 1 0.936 - - - - 0.936 - - - - proline-serine-threonine phosphatase interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-90]
63. zgc:153116 ENSDARG00000077205 7 0.936 - - - - 0.936 - - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
64. si:dkey-47k16.1 si:dkey-47k16.1 5 0.936 - - - - 0.936 - - - -
65. CR854855.2 CR854855.2 1 0.936 - - - - 0.936 - - - -
66. CU457819.2 ENSDARG00000105374 8 0.936 - - - - 0.936 - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
67. DEPDC4 DEPDC4 1 0.936 - - - - 0.936 - - - -
68. ftr53 ENSDARG00000041220, ENSDARG00000110329, ENSDARG00000110400, ENSDARG00000116082 18 0.936 - - - - 0.936 - - - - finTRIM family, member 53 [Source:ZFIN;Acc:ZDB-GENE-030616-515]
69. si:dkeyp-41f9.3 ENSDARG00000075600 2 0.936 - - - - 0.936 - - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
70. fmn1 ENSDARG00000011975 5 0.936 - - - - 0.936 - - - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
71. zgc:153311 ENSDARG00000015964 85 0.936 - - - - 0.936 - - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
72. CR944667.3_1 ENSDARG00000117685 0 0.936 - - - - 0.936 - - - -
73. FNDC7 FNDC7 0 0.936 - - - - 0.936 - - - -
74. zgc:123068 ENSDARG00000017489 15 0.936 - - - - 0.936 - - - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
75. plscr3a ENSDARG00000093078 7 0.936 - - - - 0.936 - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
76. CR356223.3 CR356223.3 0 0.936 - - - - 0.936 - - - -
77. si:dkey-153k10.6 10 0.936 - - - - 0.936 - - - - si:dkey-153k10.6, transcript variant X1
78. HEATR2 HEATR2 6 0.936 - - - - 0.936 - - - -
79. mgat4a ENSDARG00000063330 3 0.936 - - - - 0.936 - - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
80. ENSDARG00000091766 ENSDARG00000091766 15 0.936 - - - - 0.936 - - - -
81. CU681842.3 CU681842.3 2 0.936 - - - - 0.936 - - - -
82. itpr2 ENSDARG00000011909 3 0.936 - - - - 0.936 - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
83. efhb ENSDARG00000069703 9 0.936 - - - - 0.936 - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
84. erlec1 ENSDARG00000086309 1 0.936 - - - - 0.936 - - - - endoplasmic reticulum lectin 1 [Source:ZFIN;Acc:ZDB-GENE-030521-15]
85. ccnd3 ENSDARG00000027391 1 0.936 - - - - 0.936 - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
86. UTS2R_1 UTS2R_1 1 0.936 - - - - 0.936 - - - -
87. nfixa ENSDARG00000043226 14 0.936 - - - - 0.936 - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
88. si:dkey-27j5.5 ENSDARG00000026383 6 0.936 - - - - 0.936 - - - - si:dkey-27j5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-264]
89. ighm ighm 6 0.936 - - - - 0.936 - - - -
90. CR749741.3 CR749741.3 0 0.936 - - - - 0.936 - - - -
91. si:dkey-45h7.1 ENSDARG00000093618 1 0.936 - - - - 0.936 - - - - si:dkey-45h7.1 [Source:ZFIN;Acc:ZDB-GENE-050420-369]
92. dlgap1a ENSDARG00000014280 1 0.936 - - - - 0.936 - - - - discs, large (Drosophila) homolog-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030616-580]
93. cx36.7 ENSDARG00000017927 1 0.936 - - - - 0.936 - - - - connexin 36.7 [Source:ZFIN;Acc:ZDB-GENE-050616-5]
94. CR762480.2 ENSDARG00000102728 1 0.936 - - - - 0.936 - - - -
95. CU928213.1 CU928213.1 0 0.936 - - - - 0.936 - - - -
96. ELFN2 ELFN2 7 0.936 - - - - 0.936 - - - -
97. SLC4A10 SLC4A10 1 0.936 - - - - 0.936 - - - -
98. RNH1_1 RNH1_1 0 0.936 - - - - 0.936 - - - -
99. prrg2 ENSDARG00000087193 15 0.936 - - - - 0.936 - - - - proline rich Gla (G-carboxyglutamic acid) 2 [Source:ZFIN;Acc:ZDB-GENE-130625-1]
100. slc6a6b ENSDARG00000098438 7 0.936 - - - - 0.936 - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]

There are 653 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA