Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for alkbh1

Gene Name Gene ID Reads Annotation
alkbh1 ENSDARG00000071164 140 alkB homolog 1, histone H2A dioxygenase [Source:ZFIN;Acc:ZDB-GENE-050522-196]










Genes with expression patterns similar to alkbh1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. alkbh1 ENSDARG00000071164 140 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 alkB homolog 1, histone H2A dioxygenase [Source:ZFIN;Acc:ZDB-GENE-050522-196]
2. IYD IYD 8 1.616 - - - - - 0.781 0.835 - -
3. vrk2 ENSDARG00000021547 45 1.581 - 0.742 - - - 0.839 - - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
4. si:dkey-261l7.2 ENSDARG00000094345 51 1.577 0.742 - - - - - 0.835 - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
5. CU855711.1 ENSDARG00000088643 6 1.569 - - - - - 0.734 0.835 - - legumain-like [Source:NCBI gene;Acc:108191752]
6. wnt3a ENSDARG00000058822 5 1.557 - 0.722 - - - - 0.835 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
7. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 1.55 0.761 - - - - 0.789 - - - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
8. ebpl ENSDARG00000036636 79 1.505 0.702 - - - - - 0.803 - - EBP like [Source:ZFIN;Acc:ZDB-GENE-030616-542]
9. zgc:103759 ENSDARG00000019503 58 1.463 - 0.757 - - - 0.706 - - - zgc:103759 [Source:ZFIN;Acc:ZDB-GENE-041010-100]
10. si:dkey-6n3.3 si:dkey-6n3.3 9 1.457 - - - - - 0.734 0.723 - -
11. CU633908.1 ENSDARG00000113928 222 0.963 - 0.963 - - - - - - - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b [Source:NCBI gene;Acc:100332644]
12. CABZ01036951.1 CABZ01036951.1 71 0.948 - - - - - - 0.948 - -
13. DNAJC16_1 DNAJC16_1 245 0.946 - 0.946 - - - - - - -
14. grnas ENSDARG00000091885 71 0.945 - - - - - - 0.945 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
15. papd7 263 0.935 - - - - - - 0.935 - - PAP associated domain containing 7, transcript variant X2
16. sigirr ENSDARG00000062204 52 0.929 - 0.929 - - - - - - - single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:ZFIN;Acc:ZDB-GENE-080303-3]
17. ndufv3_1 ENSDARG00000090389 25 0.929 - 0.929 - - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
18. si:dkey-31e10.6 si:dkey-31e10.6 113 0.929 - 0.929 - - - - - - -
19. usp20 ENSDARG00000027501, ENSDARG00000116822 211 0.929 - - - - - - 0.929 - - ubiquitin specific peptidase 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1219]
20. ankrd16 ENSDARG00000003822, ENSDARG00000113646 64 0.928 - - - - - - 0.928 - - ankyrin repeat domain 16 [Source:ZFIN;Acc:ZDB-GENE-041210-253]
21. irx2a ENSDARG00000001785 262 0.918 - - - - - 0.918 - - - iroquois homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1446]
22. grin2db ENSDARG00000070620 101 0.917 - - - - - - 0.917 - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b [Source:ZFIN;Acc:ZDB-GENE-100920-7]
23. stxbp4 ENSDARG00000076997 20 0.915 - - - - - - 0.915 - - syntaxin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-110420-5]
24. si:ch73-109d9.1 ENSDARG00000052019 248 0.907 - - - - - - 0.907 - - si:ch73-109d9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-256]
25. si:ch211-237l4.6 ENSDARG00000056915 49 0.907 - - - - - - 0.907 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
26. asb6 ENSDARG00000007125 389 0.903 - - - - - 0.903 - - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
27. CABZ01111953.1 ENSDARG00000099747 38 0.893 - - - - - - 0.893 - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
28. SLC35G1 ENSDARG00000063268 91 0.891 - - - - - - 0.891 - - solute carrier family 35 member G1 [Source:HGNC Symbol;Acc:HGNC:26607]
29. NUFIP1 ENSDARG00000101024 229 0.891 - - - - - - 0.891 - - nuclear fragile X mental retardation protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6203]
30. kcnip3a ENSDARG00000034229 63 0.888 - - - - - - 0.888 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
31. dio2 ENSDARG00000094857 17 0.888 - - - - - - 0.888 - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
32. tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 0.888 - - - - - - 0.888 - - toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]
33. mctp1b ENSDARG00000060871 20 0.888 - - - - - - 0.888 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
34. si:ch211-152p11.8 46 0.888 - - - - - - 0.888 - - si:ch211-152p11.8, transcript variant X2
35. si:ch73-60p2.1 si:ch73-60p2.1 21 0.888 - - - - - - 0.888 - -
36. si:ch211-63o20.7 ENSDARG00000042000 93 0.888 - - - - - - 0.888 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
37. NFATC4 ENSDARG00000054162 44 0.888 - - - - - - 0.888 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
38. disp2 ENSDARG00000042846 53 0.886 - - - - - - 0.886 - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
39. CU596012.1 CU596012.1 24 0.886 - - - - - - 0.886 - -
40. TMEM260 ENSDARG00000076362 63 0.885 - - - - - - 0.885 - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
41. sod3b ENSDARG00000079183 39 0.885 - - - - - - 0.885 - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
42. henmt1 ENSDARG00000018871 46 0.878 - - - - - 0.878 - - - HEN methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-387]
43. TNS3_1 TNS3_1 8 0.878 - - - - - 0.878 - - -
44. QDPR QDPR 11 0.878 - - - - - 0.878 - - -
45. BX511270.1 BX511270.1 25 0.878 - - - - - 0.878 - - -
46. klf9 ENSDARG00000068194 5 0.877 - 0.877 - - - - - - - Kruppel-like factor 9 [Source:ZFIN;Acc:ZDB-GENE-060526-244]
47. ubxn1_1 ENSDARG00000090309 38 0.877 - - - - - - 0.877 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
48. mfsd2aa ENSDARG00000030630 66 0.877 - 0.877 - - - - - - - major facilitator superfamily domain containing 2aa [Source:ZFIN;Acc:ZDB-GENE-041114-166]
49. zgc:110224 ENSDARG00000032263 147 0.877 - 0.877 - - - - - - - zgc:110224 [Source:ZFIN;Acc:ZDB-GENE-050417-120]
50. chmp6b ENSDARG00000102024 37 0.877 - 0.877 - - - - - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
51. tekt3 ENSDARG00000045038 9 0.877 - 0.877 - - - - - - - tektin 3 [Source:ZFIN;Acc:ZDB-GENE-080130-2]
52. osgin2 ENSDARG00000040302 45 0.874 - - - - - - 0.874 - - oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
53. spata17 ENSDARG00000054414 64 0.873 - - - - - - 0.873 - - spermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]
54. NAV1 NAV1 23 0.872 - 0.872 - - - - - - -
55. BX510934.1 ENSDARG00000087544 140 0.87 - - - - - - 0.870 - -
56. si:dkey-7e14.3 ENSDARG00000086055 50 0.869 - - - - - - 0.869 - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
57. si:ch211-59h6.1 ENSDARG00000013022 193 0.869 - - - - - - 0.869 - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
58. SNX20 ENSDARG00000045554 77 0.869 - - - - - - 0.869 - - sorting nexin 20 [Source:ZFIN;Acc:ZDB-GENE-100806-1]
59. ms4a17a.5 ENSDARG00000092204, ENSDARG00000097527 56 0.867 - - - - - 0.867 - - - membrane-spanning 4-domains, subfamily A, member 17A.5 [Source:ZFIN;Acc:ZDB-GENE-040912-55]
60. si:dkey-269o24.7 si:dkey-269o24.7 28 0.867 - - - - - 0.867 - - -
61. si:ch211-250n8.1 ENSDARG00000088736 4 0.867 - - - - - 0.867 - - - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
62. si:ch73-369o7.3 si:ch73-369o7.3 20 0.867 - - - - - 0.867 - - -
63. CABZ01064968.2 CABZ01064968.2 20 0.867 - - - - - 0.867 - - -
64. arhgef9a ENSDARG00000061746 58 0.86 - - - - - - - 0.860 - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
65. iscub ENSDARG00000026582, ENSDARG00000115112 147 0.856 - - - - - - 0.856 - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
66. rad54b ENSDARG00000092134 231 0.855 - 0.855 - - - - - - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
67. f2rl1.1 ENSDARG00000068856 47 0.853 - - - - - - 0.853 - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
68. SLC37A3 176 0.853 - - - - - - 0.853 - - solute carrier family 37 member 3, transcript variant X4
69. rabggta ENSDARG00000061024 332 0.851 - - - - - - 0.851 - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
70. si:dkey-181m9.8 ENSDARG00000078267 123 0.851 - - - - - 0.851 - - - si:dkey-181m9.8 [Source:ZFIN;Acc:ZDB-GENE-070912-399]
71. ABHD12B_1 ABHD12B_1 57 0.85 - - - - - - 0.850 - -
72. oprk1 ENSDARG00000006894 43 0.85 - - - - - - 0.850 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
73. fgf10b ENSDARG00000100475 17 0.85 - - - - - - 0.850 - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
74. colq ENSDARG00000019692 656 0.849 - 0.849 - - - - - - - collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-110411-119]
75. zgc:113220 ENSDARG00000014775 235 0.849 - - - - - - 0.849 - - zgc:113220 [Source:ZFIN;Acc:ZDB-GENE-050320-64]
76. bmp6 ENSDARG00000015686 211 0.847 - - - - - - 0.847 - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
77. kcnt1 ENSDARG00000079484 45 0.847 - - - - - - 0.847 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
78. WNK3 WNK3 36 0.847 - - - - - - 0.847 - -
79. si:dkey-10p5.7 26 0.847 - - - - - - 0.847 - - si:dkey-10p5.7
80. ENSDARG00000092910 ENSDARG00000092910 44 0.847 - - - - - - 0.847 - -
81. cyp2p10 ENSDARG00000042990 176 0.847 0.847 - - - - - - - - cytochrome P450, family 2, subfamily P, polypeptide 10 [Source:ZFIN;Acc:ZDB-GENE-040120-1]
82. traf3ip1 ENSDARG00000010300 69 0.847 - - - - - - 0.847 - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
83. FDXACB1 ENSDARG00000095750 98 0.846 - 0.846 - - - - - - - ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
84. SATB1 SATB1 928 0.843 0.843 - - - - - - - -
85. RNF214 RNF214 816 0.842 - 0.842 - - - - - - -
86. tmem63a ENSDARG00000031956 112 0.841 - - - - - - 0.841 - - transmembrane protein 63A [Source:ZFIN;Acc:ZDB-GENE-041210-107]
87. ATP5J_1 ATP5J_1 15 0.839 - - - - - 0.839 - - -
88. CIT CIT 212 0.839 - - - - - - 0.839 - -
89. fam136a ENSDARG00000098401 50 0.838 - 0.838 - - - - - - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
90. 5S_rRNA_22 5S_rRNA_22 45 0.838 - - - - - 0.838 - - -
91. si:dkey-177p2.15p si:dkey-177p2.15p 20 0.838 - 0.838 - - - - - - -
92. fam78a fam78a 238 0.836 0.836 - - - - - - - -
93. CU104716.2 CU104716.2 10 0.835 - - - - - - 0.835 - -
94. si:dkey-16p6.1_2 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 1 0.835 - - - - - - 0.835 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
95. zp2.5 ENSDARG00000086522 15 0.835 - - - - - - 0.835 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
96. U1_35 U1_35 1 0.835 - - - - - - 0.835 - -
97. cyp2n13 ENSDARG00000042953 10 0.835 - - - - - - 0.835 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
98. si:dkey-122c11.1 ENSDARG00000093747 19 0.835 - - - - - - 0.835 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
99. BX511021.2 ENSDARG00000097646 5 0.835 - - - - - - 0.835 - -
100. pigr ENSDARG00000101890 10 0.835 - - - - - - 0.835 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]

There are 593 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA