Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP6

Gene Name Gene ID Reads Annotation
USP6 USP6 613










Genes with expression patterns similar to USP6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USP6 USP6 613 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:dkeyp-59c12.1 ENSDARG00000038112 186 1.895 - 0.902 - - - - - 0.993 - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
3. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 1.705 - 0.716 - - - - - 0.989 - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
4. kmt2d ENSDARG00000037060 1232 1.704 - - - - 0.711 - - 0.993 - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
5. zgc:113364 ENSDARG00000037192 339 1.703 - 0.752 - - - - - 0.951 - zgc:113364 [Source:ZFIN;Acc:ZDB-GENE-050410-5]
6. WDR77 2463 1.699 - 0.706 - - - - - 0.993 - WD repeat domain 77
7. CCDC167 ENSDARG00000045850 1024 1.676 - 0.705 - - - - - 0.971 - coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
8. BX649554.3_1 BX649554.3_1 1071 1.664 - - - - 0.741 - - 0.923 -
9. rnf165a ENSDARG00000077906 133 1.645 - 0.890 - - 0.755 - - - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
10. PIGW ENSDARG00000079244 118 1.641 - 0.908 - - - 0.733 - - - phosphatidylinositol glycan anchor biosynthesis, class W [Source:ZFIN;Acc:ZDB-GENE-080204-94]
11. zgc:91811 zgc:91811 186 1.534 - 0.824 - - - 0.710 - - -
12. wu:fc75a09 ENSDARG00000111625 289 1.515 - 0.793 - - 0.722 - - - - wu:fc75a09 [Source:ZFIN;Acc:ZDB-GENE-030131-4139]
13. gpr133 gpr133 83 1.5 - 0.793 0.707 - - - - - -
14. spc25 ENSDARG00000078433 1316 1.496 - 0.759 - - - 0.737 - - - SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-13]
15. LRRC8E LRRC8E 495 1.486 0.719 - - - - 0.767 - - -
16. tmem223 ENSDARG00000069494 1528 1.484 - 0.770 - - - - 0.714 - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
17. ankhd1 ENSDARG00000077860 5510 1.475 - - - - - - 0.753 0.722 - ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
18. zgc:174222 ENSDARG00000103078 84 1.45 - - - - 0.712 0.738 - - - zgc:174222 [Source:ZFIN;Acc:ZDB-GENE-080220-40]
19. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1.44 - 0.721 - - 0.719 - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
20. si:ch73-308b14.1 si:ch73-308b14.1 1106 1.422 - 0.721 - - - 0.701 - - -
21. hsbp1b ENSDARG00000041921 6170 1.418 - 0.717 - - - - - 0.701 - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
22. CR388231.3 ENSDARG00000105601 2404 1.418 0.716 0.702 - - - - - - -
23. slc30a9 ENSDARG00000057272 766 0.995 - - - - - - - 0.995 - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
24. cxxc1l cxxc1l 1035 0.995 - - - - - - - 0.995 -
25. TAF4 TAF4 658 0.995 - - - - - - - 0.995 -
26. si:dkey-38p12.2 si:dkey-38p12.2 504 0.994 - - - - - - - 0.994 -
27. zgc:113019 ENSDARG00000099743 994 0.994 - - - - - - - 0.994 - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
28. prelid1b ENSDARG00000044169 501 0.994 - - - - - - - 0.994 - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
29. golga4 ENSDARG00000075331 447 0.994 - - - - - - - 0.994 - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
30. slc6a11a ENSDARG00000074002 189 0.994 - - - - - - - 0.994 - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
31. hcst ENSDARG00000092074 172 0.994 - - - - - - - 0.994 - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
32. agk ENSDARG00000009837, ENSDARG00000113514 811 0.994 - - - - - - - 0.994 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
33. smyd5 ENSDARG00000071669 1194 0.993 - - - - - - - 0.993 - SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
34. pir ENSDARG00000056638 722 0.993 - - - - - - - 0.993 - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
35. PARP14 PARP14 164 0.993 - - - - - - - 0.993 -
36. C17H15orf57 C17H15orf57 1366 0.993 - - - - - - - 0.993 -
37. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 0.993 - - - - - - - 0.993 - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
38. C6H1orf159 C6H1orf159 406 0.993 - - - - - - - 0.993 -
39. fam96b 2255 0.993 - - - - - - - 0.993 - family with sequence similarity 96, member B
40. hsd17b4 ENSDARG00000101239 301 0.993 - - - - - - - 0.993 - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
41. CABZ01073405.1 CABZ01073405.1 275 0.993 - - - - - - - 0.993 -
42. ftr23 ENSDARG00000067985 254 0.992 - - - - - - - 0.992 - finTRIM family, member 23 [Source:ZFIN;Acc:ZDB-GENE-070912-322]
43. rdh12 ENSDARG00000018069 396 0.992 - - - - - - - 0.992 - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
44. si:dkey-238o14.5 si:dkey-238o14.5 450 0.992 - - - - - - - 0.992 -
45. paxip1 ENSDARG00000005606 1417 0.992 - - - - - - - 0.992 - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
46. wscd2 ENSDARG00000061819 304 0.992 - - - - - - - 0.992 - WSC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-124]
47. si:dkey-204f11.64 ENSDARG00000094695 586 0.991 - - - - - - - 0.991 - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
48. RIN3 ENSDARG00000077618 745 0.991 - - - - - - - 0.991 - Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
49. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.991 - - - - - - - 0.991 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
50. araf ENSDARG00000054533 1132 0.991 - - - - - - - 0.991 - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
51. nptx1l ENSDARG00000074671 569 0.99 - - - - - - - 0.990 - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
52. myo9b ENSDARG00000077410 1956 0.99 - - - - - - - 0.990 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
53. ufsp2 ENSDARG00000056369, ENSDARG00000115753 998 0.99 - - - - - - - 0.990 - ufm1-specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8726]
54. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.99 - - - - - - - 0.990 - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
55. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.989 - - - - - - - 0.989 - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
56. cnp ENSDARG00000070822 649 0.989 - - - - - - - 0.989 - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
57. TUBGCP6 1991 0.988 - - - - - - - 0.988 - tubulin, gamma complex associated protein 6
58. GGT7 ENSDARG00000115805 481 0.987 - - - - - - - 0.987 - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
59. exoc7 ENSDARG00000087229 987 0.987 - - - - - - - 0.987 - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
60. RNF145 RNF145 1364 0.987 - - - - - - - 0.987 -
61. si:dkey-3h3.3 ENSDARG00000067718 225 0.986 - - - - - - - 0.986 - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
62. vps4b ENSDARG00000069175 1922 0.986 - - - - - - - 0.986 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
63. zgc:113443 359 0.985 - - - - - - - 0.985 - zgc:113443, transcript variant X3
64. yy1b ENSDARG00000027978 2669 0.985 - - - - - - - 0.985 - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
65. tfe3b ENSDARG00000019457, ENSDARG00000111231 507 0.985 - - - - - - - 0.985 - transcription factor binding to IGHM enhancer 3b [Source:ZFIN;Acc:ZDB-GENE-010919-3]
66. si:dkey-193b15.6 si:dkey-193b15.6 1340 0.985 - - - - - - - 0.985 -
67. LRP10 ENSDARG00000054539 1895 0.984 - - - - - - - 0.984 - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
68. arpc5a ENSDARG00000039142 5482 0.984 - - - - - - - 0.984 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
69. agtr1b ENSDARG00000045443 232 0.983 - - - - - - - 0.983 - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
70. gpr146 ENSDARG00000059610 810 0.983 - - - - - - - 0.983 - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
71. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 0.983 - - - - - - - 0.983 - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
72. scaf11 ENSDARG00000045885 3531 0.983 - - - - - - - 0.983 - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
73. PHLPP1 ENSDARG00000078694 2466 0.982 - - - - - - - 0.982 - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
74. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 0.982 - - - - - - - 0.982 - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
75. lamp1 1017 0.982 - - - - - - - 0.982 - lysosomal-associated membrane protein 1
76. sly1 sly1 2403 0.982 - - - - - - - 0.982 -
77. gigfy2 3194 0.982 - - - - - - - 0.982 - GRB10 interacting GYF protein 2, transcript variant X1
78. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 0.982 - - - - - - - 0.982 - tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
79. cenpl ENSDARG00000038802 696 0.981 - - - - - - - 0.981 - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
80. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 0.981 - - - - - - - 0.981 - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
81. pcyt2 ENSDARG00000043003 3506 0.98 - - - - - - - 0.980 - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
82. epc1 epc1 1164 0.98 - - - - - - - 0.980 -
83. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 0.979 - - - - - - - 0.979 - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
84. srebf2 ENSDARG00000063438 1982 0.979 - - - - - - - 0.979 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
85. nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 0.979 - - - - - - - 0.979 - nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]
86. drg2 ENSDARG00000006642 1167 0.978 - - - - - - - 0.978 - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
87. qars ENSDARG00000010316 2715 0.978 - - - - - - - 0.978 - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
88. csf1a ENSDARG00000075343 548 0.977 - - - - - - - 0.977 - colony stimulating factor 1a (macrophage) [Source:ZFIN;Acc:ZDB-GENE-080204-107]
89. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 0.976 - - - - - - - 0.976 - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
90. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.976 - - - - - - - 0.976 - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
91. ell ENSDARG00000000568 1404 0.975 - - - - - - - 0.975 - elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
92. arap3 ENSDARG00000076801 725 0.973 - - - - - - - 0.973 - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]
93. si:ch211-76l23.4 ENSDARG00000096242 202 0.973 - - - - - - - 0.973 - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
94. AIFM2 ENSDARG00000077549 1419 0.973 - - - - - - - 0.973 - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
95. st6gal2 st6gal2 1570 0.972 - - - - - - - 0.972 -
96. usp1 ENSDARG00000056414 1816 0.972 - - - - - - - 0.972 - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
97. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.972 - - - - - - - 0.972 - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
98. dyrk1b ENSDARG00000070187 2777 0.971 - - - - - - - 0.971 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
99. elovl6l ENSDARG00000038639 1184 0.971 - - - - - - - 0.971 - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
100. pcnp ENSDARG00000037713 2754 0.971 - - - - - - - 0.971 - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]

There are 822 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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