Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP53

Gene Name Gene ID Reads Annotation
USP53 USP53 5










Genes with expression patterns similar to USP53

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USP53 USP53 5 4 1.000 1.000 1.000 - - - - 1.000 -
2. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 2 1.000 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
3. CR628395.1 ENSDARG00000116298 75 2 1.000 1.000 - - - - - - -
4. cnnm4 cnnm4 2 1.987 - 1.000 0.987 - - - - - -
5. SLC38A8 SLC38A8 17 1.802 1.000 0.802 - - - - - - -
6. si:dkey-222f2.1 ENSDARG00000043242 192 1.774 0.774 1.000 - - - - - - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
7. zgc:163077 ENSDARG00000101593 60 1.767 - 1.000 0.767 - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
8. zp3a.1 ENSDARG00000042129 18 1.736 - 1.000 0.736 - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
9. r3hcc1 ENSDARG00000099593 188 1.724 0.805 0.919 - - - - - - - R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
10. ODF3L2 40 1.701 0.701 1.000 - - - - - - - outer dense fiber of sperm tails 3-like 2
11. BX465841.1 BX465841.1 47 1.658 0.752 0.906 - - - - - - -
12. ficd ENSDARG00000035595 129 1.628 0.826 0.802 - - - - - - - FIC domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-6588]
13. tnfsf13b ENSDARG00000012945 54 1.572 - 0.802 0.770 - - - - - - TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
14. spo11 ENSDARG00000013837 7 1 - 1.000 - - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
15. BX548021.2 BX548021.2 4 1 - - - - - - - 1.000 -
16. C5H9orf9 C5H9orf9 6 1 1.000 - - - - - - - -
17. CABZ01117437.1 CABZ01117437.1 11 1 - - - - - - - 1.000 -
18. rgs13 ENSDARG00000017653 8 1 1.000 - - - - - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
19. socs1a ENSDARG00000038095 20 1 1.000 - - - - - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
20. F13A1 F13A1 1 1 - 1.000 - - - - - - -
21. cx50.5 cx50.5 15 1 - 1.000 - - - - - - -
22. QSOX2 ENSDARG00000077174 26 1 - 1.000 - - - - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
23. slc5a8l ENSDARG00000003697, ENSDARG00000110685 69 1 1.000 - - - - - - - - solute carrier family 5 (iodide transporter), member 8-like [Source:ZFIN;Acc:ZDB-GENE-061110-98]
24. antxr1d ENSDARG00000060845 10 1 - - - - - - - 1.000 - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
25. zgc:172282 ENSDARG00000105059 64 1 - 1.000 - - - - - - - zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
26. rapgef5b ENSDARG00000074307 112 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
27. si:dkey-85n7.11 si:dkey-85n7.11 2 1 - 1.000 - - - - - - -
28. si:ch211-223f7.1 si:ch211-223f7.1 38 1 - 1.000 - - - - - - -
29. si:ch211-145h19.1 31 1 - 1.000 - - - - - - - si:ch211-145h19.1
30. ENSDARG00000088164 ENSDARG00000088164 59 1 - 1.000 - - - - - - -
31. CABZ01081674.1 CABZ01081674.1 15 1 - 1.000 - - - - - - -
32. cabp1a ENSDARG00000019990 110 1 - 1.000 - - - - - - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
33. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - 1.000 - - - - - - -
34. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - 1.000 - - - - - - -
35. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - 1.000 - - - - - - -
36. pcolce2b ENSDARG00000055575 2 1 1.000 - - - - - - - - procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
37. BX682552.2_1 BX682552.2_1 37 1 - 1.000 - - - - - - -
38. mir30b 4 1 1.000 - - - - - - - - microRNA 30b
39. si:ch211-79g12.1 ENSDARG00000116692 2 1 - 1.000 - - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
40. nipa1 ENSDARG00000055917 132 1 1.000 - - - - - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
41. fnbp1 fnbp1 5 1 1.000 - - - - - - - -
42. si:dkey-162h11.2 si:dkey-162h11.2 257 1 1.000 - - - - - - - -
43. HMBOX1 HMBOX1 67 1 - 1.000 - - - - - - -
44. BX511182.1 BX511182.1 8 1 - 1.000 - - - - - - -
45. MFAP4_4 MFAP4_4 9 1 - 1.000 - - - - - - -
46. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 1.000 - - - - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
47. stk35_1 ENSDARG00000086856 3 1 - - - - - - - 1.000 - serine/threonine kinase 35 [Source:ZFIN;Acc:ZDB-GENE-061103-553]
48. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1 1.000 - - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
49. ENSDARG00000089152 ENSDARG00000089152 12 1 1.000 - - - - - - - -
50. cntnap5a ENSDARG00000073920 39 1 - 1.000 - - - - - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
51. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1 1.000 - - - - - - - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
52. fam166b ENSDARG00000100292 14 1 1.000 - - - - - - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
53. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - 1.000 - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
54. megf8 ENSDARG00000079751, ENSDARG00000103934 1 1 - 1.000 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
55. si:ch211-103a14.1 si:ch211-103a14.1 1 1 - 1.000 - - - - - - -
56. otx1a 1607 1 1.000 - - - - - - - - orthodenticle homeobox 1a
57. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - 1.000 - - - - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
58. tmc1 23 1 - 1.000 - - - - - - - transmembrane channel-like 1, transcript variant X1
59. sept4a ENSDARG00000010385 75 1 - 1.000 - - - - - - - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
60. si:ch73-343l4.8 ENSDARG00000077975 4 1 - - - - - - - 1.000 - si:ch73-343l4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-159]
61. lamb1a_1 ENSDARG00000101209 13 1 1.000 - - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
62. CU302326.2 CU302326.2 54 1 - 1.000 - - - - - - -
63. neurod2 ENSDARG00000016854 6 1 - 1.000 - - - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
64. PLB1 PLB1 20 1 1.000 - - - - - - - -
65. si:ch211-131e11.19 27 1 - - - - - - - 1.000 - si:ch211-131e11.19
66. RP1L1 RP1L1 15 1 - 1.000 - - - - - - -
67. atn1 ENSDARG00000092067 257 1 - 1.000 - - - - - - - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
68. dnaaf3 ENSDARG00000092662 20 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
69. CA4 CA4 1 1 - 1.000 - - - - - - -
70. SNORA77 SNORA77 2 1 - - - - - - - 1.000 -
71. si:ch211-196c10.13 ENSDARG00000096756 28 1 1.000 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
72. C11H1orf116 C11H1orf116 9 1 1.000 - - - - - - - -
73. slc35f3a ENSDARG00000075909 1 1 - 1.000 - - - - - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
74. anks4b ENSDARG00000036846 8 1 - 1.000 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
75. rasal3 ENSDARG00000089933 17 1 1.000 - - - - - - - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
76. bgna ENSDARG00000017884 9 1 - 1.000 - - - - - - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
77. ctso ENSDARG00000052855 29 1 - 1.000 - - - - - - - cathepsin O [Source:ZFIN;Acc:ZDB-GENE-080724-8]
78. dio2 ENSDARG00000094857 17 1 1.000 - - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
79. aftphb ENSDARG00000071347 161 1 - 1.000 - - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
80. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1 1.000 - - - - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
81. BX957311.1 ENSDARG00000097710 1 1 - 1.000 - - - - - - -
82. CYP46A1 CYP46A1 16 1 1.000 - - - - - - - -
83. dnase1l3l dnase1l3l 16 1 1.000 - - - - - - - -
84. ugt5e1 ENSDARG00000058048 25 1 - 1.000 - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
85. si:dkey-71l1.1 ENSDARG00000052411 11 1 1.000 - - - - - - - - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
86. CABZ01067072.1 CABZ01067072.1 17 1 1.000 - - - - - - - -
87. si:ch211-152p23.2 ENSDARG00000094519 4 1 1.000 - - - - - - - - si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
88. pcolce2a ENSDARG00000008450 22 1 - 1.000 - - - - - - - procollagen C-endopeptidase enhancer 2a [Source:ZFIN;Acc:ZDB-GENE-070705-25]
89. CR942805.3 CR942805.3 7 1 - - - - - - - 1.000 -
90. TEAD1 TEAD1 43 1 1.000 - - - - - - - -
91. PGBD4_4 PGBD4_4 15 1 - 1.000 - - - - - - -
92. c6ast4 ENSDARG00000052578 6 1 - - - - - - - 1.000 - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
93. zgc:113229 ENSDARG00000037398, ENSDARG00000117068 14 1 - - - - - - - 1.000 - zgc:113229 [Source:ZFIN;Acc:ZDB-GENE-050417-475]
94. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - - - - - - - 1.000 - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
95. si:ch211-119c24.1 si:ch211-119c24.1 17 1 - 1.000 - - - - - - -
96. SNTB2 ENSDARG00000051763 2 1 - 1.000 - - - - - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
97. CABZ01061914.2 CABZ01061914.2 2 1 - 1.000 - - - - - - -
98. zgc:113425 ENSDARG00000026616 29 1 1.000 - - - - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
99. sumo2a ENSDARG00000104390 4 1 - 1.000 - - - - - - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
100. Metazoa_SRP_19 Metazoa_SRP_19 17 1 - 1.000 - - - - - - -

There are 645 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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