Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP53

Gene Name Gene ID Reads Annotation
USP53 USP53 5










Genes with expression patterns similar to USP53

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USP53 USP53 5 4 1.000 1.000 1.000 - - - - 1.000 -
2. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 2 1.000 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
3. CR628395.1 ENSDARG00000116298 75 2 1.000 1.000 - - - - - - -
4. cnnm4 cnnm4 2 1.987 - 1.000 0.987 - - - - - -
5. SLC38A8 SLC38A8 17 1.802 1.000 0.802 - - - - - - -
6. si:dkey-222f2.1 ENSDARG00000043242 192 1.774 0.774 1.000 - - - - - - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
7. zgc:163077 ENSDARG00000101593 60 1.767 - 1.000 0.767 - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
8. zp3a.1 ENSDARG00000042129 18 1.736 - 1.000 0.736 - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
9. r3hcc1 ENSDARG00000099593 188 1.724 0.805 0.919 - - - - - - - R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
10. ODF3L2 40 1.701 0.701 1.000 - - - - - - - outer dense fiber of sperm tails 3-like 2
11. BX465841.1 BX465841.1 47 1.658 0.752 0.906 - - - - - - -
12. ficd ENSDARG00000035595 129 1.628 0.826 0.802 - - - - - - - FIC domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-6588]
13. tnfsf13b ENSDARG00000012945 54 1.572 - 0.802 0.770 - - - - - - TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
14. megf8 ENSDARG00000079751, ENSDARG00000103934 1 1 - 1.000 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
15. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - 1.000 - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
16. fam166b ENSDARG00000100292 14 1 1.000 - - - - - - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
17. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1 1.000 - - - - - - - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
18. cntnap5a ENSDARG00000073920 39 1 - 1.000 - - - - - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
19. ENSDARG00000089152 ENSDARG00000089152 12 1 1.000 - - - - - - - -
20. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1 1.000 - - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
21. sept4a ENSDARG00000010385 75 1 - 1.000 - - - - - - - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
22. tmc1 23 1 - 1.000 - - - - - - - transmembrane channel-like 1, transcript variant X1
23. otx1a 1607 1 1.000 - - - - - - - - orthodenticle homeobox 1a
24. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - 1.000 - - - - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
25. si:ch211-103a14.1 si:ch211-103a14.1 1 1 - 1.000 - - - - - - -
26. CA4 CA4 1 1 - 1.000 - - - - - - -
27. dnaaf3 ENSDARG00000092662 20 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
28. atn1 ENSDARG00000092067 257 1 - 1.000 - - - - - - - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
29. RP1L1 RP1L1 15 1 - 1.000 - - - - - - -
30. si:ch211-131e11.19 27 1 - - - - - - - 1.000 - si:ch211-131e11.19
31. neurod2 ENSDARG00000016854 6 1 - 1.000 - - - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
32. PLB1 PLB1 20 1 1.000 - - - - - - - -
33. lamb1a_1 ENSDARG00000101209 13 1 1.000 - - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
34. CU302326.2 CU302326.2 54 1 - 1.000 - - - - - - -
35. si:ch73-343l4.8 ENSDARG00000077975 4 1 - - - - - - - 1.000 - si:ch73-343l4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-159]
36. rasal3 ENSDARG00000089933 17 1 1.000 - - - - - - - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
37. anks4b ENSDARG00000036846 8 1 - 1.000 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
38. slc35f3a ENSDARG00000075909 1 1 - 1.000 - - - - - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
39. C11H1orf116 C11H1orf116 9 1 1.000 - - - - - - - -
40. si:ch211-196c10.13 ENSDARG00000096756 28 1 1.000 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
41. SNORA77 SNORA77 2 1 - - - - - - - 1.000 -
42. rgs13 ENSDARG00000017653 8 1 1.000 - - - - - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
43. CABZ01117437.1 CABZ01117437.1 11 1 - - - - - - - 1.000 -
44. C5H9orf9 C5H9orf9 6 1 1.000 - - - - - - - -
45. BX548021.2 BX548021.2 4 1 - - - - - - - 1.000 -
46. spo11 ENSDARG00000013837 7 1 - 1.000 - - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
47. ENSDARG00000088164 ENSDARG00000088164 59 1 - 1.000 - - - - - - -
48. si:ch211-145h19.1 31 1 - 1.000 - - - - - - - si:ch211-145h19.1
49. si:ch211-223f7.1 si:ch211-223f7.1 38 1 - 1.000 - - - - - - -
50. si:dkey-85n7.11 si:dkey-85n7.11 2 1 - 1.000 - - - - - - -
51. rapgef5b ENSDARG00000074307 112 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
52. antxr1d ENSDARG00000060845 10 1 - - - - - - - 1.000 - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
53. zgc:172282 ENSDARG00000105059 64 1 - 1.000 - - - - - - - zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
54. slc5a8l ENSDARG00000003697, ENSDARG00000110685 69 1 1.000 - - - - - - - - solute carrier family 5 (iodide transporter), member 8-like [Source:ZFIN;Acc:ZDB-GENE-061110-98]
55. QSOX2 ENSDARG00000077174 26 1 - 1.000 - - - - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
56. cx50.5 cx50.5 15 1 - 1.000 - - - - - - -
57. F13A1 F13A1 1 1 - 1.000 - - - - - - -
58. socs1a ENSDARG00000038095 20 1 1.000 - - - - - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
59. si:ch211-79g12.1 ENSDARG00000116692 2 1 - 1.000 - - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
60. mir30b 4 1 1.000 - - - - - - - - microRNA 30b
61. BX682552.2_1 BX682552.2_1 37 1 - 1.000 - - - - - - -
62. pcolce2b ENSDARG00000055575 2 1 1.000 - - - - - - - - procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
63. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - 1.000 - - - - - - -
64. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - 1.000 - - - - - - -
65. cabp1a ENSDARG00000019990 110 1 - 1.000 - - - - - - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
66. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - 1.000 - - - - - - -
67. CABZ01081674.1 CABZ01081674.1 15 1 - 1.000 - - - - - - -
68. stk35_1 ENSDARG00000086856 3 1 - - - - - - - 1.000 - serine/threonine kinase 35 [Source:ZFIN;Acc:ZDB-GENE-061103-553]
69. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 1.000 - - - - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
70. MFAP4_4 MFAP4_4 9 1 - 1.000 - - - - - - -
71. HMBOX1 HMBOX1 67 1 - 1.000 - - - - - - -
72. BX511182.1 BX511182.1 8 1 - 1.000 - - - - - - -
73. si:dkey-162h11.2 si:dkey-162h11.2 257 1 1.000 - - - - - - - -
74. nipa1 ENSDARG00000055917 132 1 1.000 - - - - - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
75. fnbp1 fnbp1 5 1 1.000 - - - - - - - -
76. asic2 ENSDARG00000006849 18 1 - 1.000 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
77. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1 1.000 - - - - - - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
78. MAP7_1 MAP7_1 42 1 - 1.000 - - - - - - -
79. oxgr1a.1 ENSDARG00000033684 24 1 - 1.000 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
80. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - - - - - - 1.000 -
81. si:ch211-113a14.14_1 si:ch211-113a14.14_1 7 1 - 1.000 - - - - - - -
82. BX601644.1 ENSDARG00000090632 2 1 1.000 - - - - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
83. si:dkey-3d18.5 ENSDARG00000096239 3 1 1.000 - - - - - - - - si:dkey-3d18.5 [Source:ZFIN;Acc:ZDB-GENE-120215-143]
84. CU915778.2 CU915778.2 194 1 1.000 - - - - - - - -
85. si:ch211-229i14.2 ENSDARG00000086048 19 1 - 1.000 - - - - - - - si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
86. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - 1.000 - - - - - - -
87. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - - - - 1.000 - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
88. zgc:153921_1 ENSDARG00000020738, ENSDARG00000038405 19 1 1.000 - - - - - - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
89. C10H5orf42 C10H5orf42 5 1 1.000 - - - - - - - -
90. EFEMP1 32 1 - 1.000 - - - - - - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
91. PBRM1 ENSDARG00000003877 225 1 - 1.000 - - - - - - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
92. cyp1c2 ENSDARG00000101789 3 1 - - - - - - - 1.000 - cytochrome P450, family 1, subfamily C, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050705-1]
93. si:dkey-25i10.5 si:dkey-25i10.5 18 1 - 1.000 - - - - - - -
94. gabpb1 ENSDARG00000023659 26 1 1.000 - - - - - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
95. tlcd1 ENSDARG00000002391 90 1 1.000 - - - - - - - - TLC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-173]
96. FP103003.1_1 FP103003.1_1 6 1 1.000 - - - - - - - -
97. si:dkey-176g1.4 si:dkey-176g1.4 1 1 - 1.000 - - - - - - -
98. nr2e1 ENSDARG00000017107 340 1 1.000 - - - - - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
99. crygmx ENSDARG00000053862 482 1 1.000 - - - - - - - - crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
100. CYP46A1 CYP46A1 16 1 1.000 - - - - - - - -

There are 645 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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