Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USF2

Gene Name Gene ID Reads Annotation
USF2 ENSDARG00000020228 3 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]










Genes with expression patterns similar to USF2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USF2 ENSDARG00000020228 3 3 - - - - - 1.000 - 1.000 1.000 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
2. vip ENSDARG00000078247 10 1.986 - - - - - 1.000 - - 0.986 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
3. mir124-1 10 1.928 - - - - - 1.000 - - 0.928 microRNA 124-1
4. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.897 - - - - - 1.000 - - 0.897 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
5. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
6. DKK3 DKK3 12 1 - - - - - 1.000 - - -
7. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
8. MFAP4_4 MFAP4_4 9 1 - - - - - 1.000 - - -
9. si:dkey-20i20.13 si:dkey-20i20.13 0 1 - - - - - 1.000 - - -
10. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
11. samd12 1 1 - - - - - - - - 1.000 sterile alpha motif domain containing 12, transcript variant X2
12. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
13. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
14. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
15. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
16. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
17. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - - - - - - - 1.000 si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
18. ebi3 ENSDARG00000053620 5 1 - - - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
19. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
20. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
21. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
22. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
23. BX248324.1 ENSDARG00000096489 3 1 - - - - - - - - 1.000
24. efemp2b_1 ENSDARG00000020811 77 1 - - - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
25. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
26. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
27. IFT43 4 1 - - - - - - - - 1.000 intraflagellar transport 43
28. si:dkey-14o18.3 si:dkey-14o18.3 5 1 - - - - - - - - 1.000
29. caps2 ENSDARG00000058486 4 1 - - - - - - - - 1.000 calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
30. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - - - - - 1.000 si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
31. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
32. CR384075.2 CR384075.2 1 1 - - - - - 1.000 - - -
33. OGN 1 1 - - - - - - - - 1.000 osteoglycin
34. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
35. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
36. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
37. si:dkey-30j19.3 si:dkey-30j19.3 3 1 - - - - - - - - 1.000
38. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - - - - - 1.000
39. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
40. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
41. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
42. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
43. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
44. si:ch211-215e19.8 ENSDARG00000098106 1 1 - - - - - - - - 1.000 si:ch211-215e19.8 [Source:ZFIN;Acc:ZDB-GENE-070705-106]
45. BX005265.1 BX005265.1 4 1 - - - - - - - - 1.000
46. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -
47. dapk2 dapk2 24 1 - - - - - 1.000 - - -
48. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
49. si:rp71-84d19.2 si:rp71-84d19.2 34 1 - - - - - 1.000 - - -
50. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1 - - - - - 1.000 - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
51. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - - - - - 1.000
52. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
53. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
54. il10 ENSDARG00000078147 3 1 - - - - - - - - 1.000 interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]
55. fam5b fam5b 45 1 - - - - - 1.000 - - -
56. pcdh15b ENSDARG00000008127 2 1 - - - - - - - - 1.000 protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
57. mxb ENSDARG00000004953 3 1 - - - - - - - - 1.000 myxovirus (influenza) resistance B [Source:ZFIN;Acc:ZDB-GENE-030721-6]
58. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
59. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
60. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
61. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
62. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
63. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
64. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
65. nrp2a ENSDARG00000096546 2 1 - - - - - - - - 1.000 neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
66. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
67. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
68. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
69. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
70. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
71. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
72. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
73. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
74. si:dkey-78a14.5 14 1 - - - - - - - - 1.000 si:dkey-78a14.5, transcript variant X2
75. slc8a1b ENSDARG00000043406, ENSDARG00000110108 4 1 - - - - - - - - 1.000 solute carrier family 8 (sodium/calcium exchanger), member 1b [Source:ZFIN;Acc:ZDB-GENE-060110-3]
76. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
77. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
78. slc35f3b ENSDARG00000059850 5 1 - - - - - - - - 1.000 solute carrier family 35, member F3b [Source:ZFIN;Acc:ZDB-GENE-090312-118]
79. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
80. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - 1.000 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
81. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - 1.000 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
82. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
83. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
84. hip1r hip1r 10 1 - - - - - 1.000 - - -
85. ttll3 ENSDARG00000053728 7 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
86. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
87. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
88. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
89. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - - - - 1.000 contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
90. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
91. si:ch211-121j5.2 si:ch211-121j5.2 86 1 - - - - - 1.000 - - -
92. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - - 1.000 BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
93. strip1 ENSDARG00000074084 0 1 - - - - - 1.000 - - - striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]
94. si:dkey-8o9.5 si:dkey-8o9.5 6 1 - - - - - - - - 1.000
95. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
96. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
97. cryaba ENSDARG00000042621 2 1 - - - - - - - - 1.000 crystallin, alpha B, a [Source:ZFIN;Acc:ZDB-GENE-991119-2]
98. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
99. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
100. ppp1r9a ENSDARG00000061304 12 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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