Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for U3

Gene Name Gene ID Reads Annotation
U3 U3 287










Genes with expression patterns similar to U3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. U3 U3 287 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:ch211-113p18.3 ENSDARG00000087835 377 2.52 - - - 0.889 - 0.776 0.855 - - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
3. SNORD94 SNORD94 57 1.911 - 0.994 - 0.917 - - - - -
4. chic2 ENSDARG00000022690 184 1.776 - - - 0.897 - - 0.879 - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
5. ncbp2 ENSDARG00000014898 232 1.766 - 0.818 - - - - 0.948 - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
6. gltpd1 gltpd1 377 1.764 - - - 0.855 - - 0.909 - -
7. lhpp ENSDARG00000060196 34 1.756 - 0.895 - - - 0.861 - - - phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:ZFIN;Acc:ZDB-GENE-070615-43]
8. CABZ01081749.1 CABZ01081749.1 637 1.748 - - - 0.873 - - 0.875 - -
9. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.726 - 0.757 - - - - 0.969 - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
10. arhgef6 ENSDARG00000006683 59 1.72 0.950 - - - - 0.770 - - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-101013-2]
11. nudt1 ENSDARG00000030573 268 1.719 - - - 0.907 - - 0.812 - - nudix (nucleoside diphosphate linked moiety X)-type motif 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2757]
12. kcnk18 ENSDARG00000057049, ENSDARG00000110571, ENSDARG00000112385 118 1.713 - 0.846 - 0.867 - - - - - potassium channel, subfamily K, member 18 [Source:ZFIN;Acc:ZDB-GENE-100405-2]
13. tmem168a ENSDARG00000068705 498 1.691 - - - 0.833 - - 0.858 - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
14. tmem110 497 1.687 - - - - - 0.746 0.941 - - transmembrane protein 110
15. ap1g2 ENSDARG00000054337, ENSDARG00000116382 374 1.683 - - - 0.864 - - 0.819 - - adaptor related protein complex 1 subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030616-587]
16. chek2 ENSDARG00000025820, ENSDARG00000115597 77 1.676 - 0.746 - - - - 0.930 - - checkpoint kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8942]
17. CABZ01024770.1 CABZ01024770.1 150 1.675 - - - - - 0.764 0.911 - -
18. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.67 - 0.757 - 0.913 - - - - -
19. CABZ01044023.1 ENSDARG00000117734 240 1.665 - - - - - 0.703 0.962 - -
20. si:ch211-130m23.2 ENSDARG00000095136 121 1.661 - - - - - 0.753 0.908 - - si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
21. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.653 - - - 0.796 - - 0.857 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
22. ift57 ENSDARG00000021022 288 1.65 - 0.748 - - - - 0.902 - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
23. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 1.65 - - - - - 0.742 0.908 - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
24. zgc:153924 507 1.65 - - - 0.850 - - 0.800 - - zgc:153924
25. iqsec2 iqsec2 304 1.627 - - - 0.903 - - 0.724 - -
26. PDGFC ENSDARG00000077588 1064 1.625 - - - 0.788 - - 0.837 - - platelet derived growth factor c [Source:ZFIN;Acc:ZDB-GENE-071217-2]
27. phyh ENSDARG00000086740 88 1.598 - 0.791 - - - 0.807 - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
28. susd5 ENSDARG00000088277 439 1.575 - 0.750 - 0.825 - - - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
29. slc45a1 ENSDARG00000004302 152 1.565 0.767 0.798 - - - - - - - solute carrier family 45, member 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2152]
30. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.561 - - - 0.712 - - 0.849 - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
31. rfx1b ENSDARG00000075904 1175 1.557 - - - 0.822 - - 0.735 - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
32. NELL2A ENSDARG00000090690 840 1.55 - 0.757 - 0.793 - - - - - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
33. HDX ENSDARG00000079382 513 1.549 - 0.754 - 0.795 - - - - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
34. si:dkey-95p16.2 ENSDARG00000093484 3413 1.533 - - - 0.778 - - 0.755 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
35. cetn3 ENSDARG00000011825 1087 1.532 - 0.703 - 0.829 - - - - - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
36. lrp1bb ENSDARG00000061517 172 1.506 - 0.714 - - - 0.792 - - - low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
37. OVOL1 75 1.498 - - - 0.728 - 0.770 - - - ovo-like zinc finger 1, transcript variant X1
38. prkacab ENSDARG00000016809 1441 1.484 - - - - - 0.717 0.767 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-040801-208]
39. fah ENSDARG00000101762 274 1.481 - - - - - 0.759 0.722 - - fumarylacetoacetate hydrolase (fumarylacetoacetase) [Source:ZFIN;Acc:ZDB-GENE-030131-1091]
40. bty bty 752 1.476 - - - - - 0.742 0.734 - -
41. scamp2l ENSDARG00000017010 491 1.469 - - - 0.728 - - 0.741 - - secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
42. inhbb ENSDARG00000040777 2141 1.467 - - - 0.717 - - 0.750 - - inhibin subunit beta B [Source:ZFIN;Acc:ZDB-GENE-990415-2]
43. disp1 ENSDARG00000044417 603 1.46 - - - 0.748 - - 0.712 - - dispatched homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030911-7]
44. HOMEZ HOMEZ 1824 1.455 - - - - - 0.707 0.748 - -
45. si:rp71-78h1.10 si:rp71-78h1.10 104 0.994 - 0.994 - - - - - - -
46. robo4 ENSDARG00000009387 98 0.994 - 0.994 - - - - - - - roundabout, axon guidance receptor, homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020809-1]
47. lpar6b ENSDARG00000069441 65 0.994 - - - - - - 0.994 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
48. si:ch211-117l17.4 ENSDARG00000103534 24 0.992 - - - - - - 0.992 - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
49. BX296557.2 BX296557.2 1083 0.992 - - - - - - 0.992 - -
50. fubp3 ENSDARG00000086896 21 0.992 - - - - - - 0.992 - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
51. tnfb ENSDARG00000013598 94 0.992 - - - - - - 0.992 - - tumor necrosis factor b (TNF superfamily, member 2) [Source:ZFIN;Acc:ZDB-GENE-050601-2]
52. zgc:136254 ENSDARG00000068465 27 0.991 - - - - - - 0.991 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
53. ttr ENSDARG00000037191 11 0.991 - - - - - - 0.991 - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
54. VWA5A_1 VWA5A_1 6 0.991 - - - - - - 0.991 - -
55. si:busm1-180g5.7 si:busm1-180g5.7 15 0.991 - - - - - - 0.991 - -
56. BICD2_1 BICD2_1 18 0.991 - - - - - - 0.991 - -
57. ca8 ENSDARG00000039098 401 0.991 - - - - - - 0.991 - - carbonic anhydrase VIII [Source:ZFIN;Acc:ZDB-GENE-050417-26]
58. guca1c ENSDARG00000030758 9 0.991 - - - - - - 0.991 - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
59. dhrs13l1 ENSDARG00000098746 102 0.991 - - - - - - 0.991 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
60. si:dkey-177p2.15p si:dkey-177p2.15p 20 0.991 - - - - - - 0.991 - -
61. ctgfb ENSDARG00000104292 69 0.991 - - - - - - 0.991 - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
62. MPPED1 ENSDARG00000088181 117 0.991 - - - - - - 0.991 - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
63. ENSDARG00000091446 ENSDARG00000091446 239 0.991 - - - - - - 0.991 - -
64. SLC38A9 ENSDARG00000032769 35 0.991 - - - - - - 0.991 - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
65. LAMC2 ENSDARG00000068288 37 0.991 - - - - - - 0.991 - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
66. trim62 ENSDARG00000060901 12 0.991 - - - - - - 0.991 - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
67. si:ch211-219f7.3 si:ch211-219f7.3 48 0.99 - - - - - - 0.990 - -
68. KBTBD13 ENSDARG00000076449 10 0.99 - - - - - - 0.990 - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
69. cdadc1 ENSDARG00000036650 16 0.99 - - - - - - 0.990 - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
70. adck1 ENSDARG00000062561 22 0.99 - - - - - - 0.990 - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
71. fpgt ENSDARG00000042139 155 0.989 - - - - - - 0.989 - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
72. prkcba ENSDARG00000008723, ENSDARG00000116813 30 0.989 - - - - - - 0.989 - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
73. si:ch211-284o19.8 ENSDARG00000053836 43 0.989 - - - - - - 0.989 - - si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]
74. TTBK1 TTBK1 120 0.988 - - - - - - 0.988 - -
75. CU681846.1 CU681846.1 86 0.988 - - - - - - 0.988 - -
76. pign ENSDARG00000077532 123 0.988 - - - - - - 0.988 - - phosphatidylinositol glycan anchor biosynthesis, class N [Source:ZFIN;Acc:ZDB-GENE-080204-114]
77. si:dkey-16n15.3 223 0.988 - - - - - - 0.988 - - si:dkey-16n15.3
78. kcnh6 kcnh6 59 0.988 - - - - - - 0.988 - -
79. si:ch211-113a14.12 ENSDARG00000077456 1004 0.987 - - - - - - 0.987 - - si:ch211-113a14.12 [Source:ZFIN;Acc:ZDB-GENE-121214-99]
80. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 0.987 - - - - - - 0.987 - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
81. CR790368.1 ENSDARG00000100936 20 0.987 - - - - - - 0.987 - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
82. si:dkey-240h12.4 ENSDARG00000034210 114 0.986 - - - - - - 0.986 - - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
83. TRHDE_1 TRHDE_1 102 0.986 - - - - - - 0.986 - -
84. fntb ENSDARG00000027916 736 0.986 - - - - - - 0.986 - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
85. tnfaip6 ENSDARG00000093440, ENSDARG00000111060 91 0.985 - - - - - - 0.985 - - tumor necrosis factor, alpha-induced protein 6 [Source:ZFIN;Acc:ZDB-GENE-060421-2654]
86. ccrl1a ccrl1a 40 0.985 - - - - - - 0.985 - -
87. si:ch211-135f11.1 166 0.985 - - - - - - 0.985 - - si:ch211-135f11.1, transcript variant X3
88. SLC44A2 ENSDARG00000037059 88 0.984 - - - - - - 0.984 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
89. CABZ01048373.1 CABZ01048373.1 81 0.984 - - - - - - 0.984 - -
90. otx2 766 0.983 - - - - - - 0.983 - - orthodenticle homeobox 2, transcript variant X2
91. ppcs ENSDARG00000061889 224 0.983 - - - - - - 0.983 - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
92. si:rp71-3c13.3 si:rp71-3c13.3 128 0.983 - - - - - - 0.983 - -
93. spsb3a ENSDARG00000077737 527 0.983 - - - - - - 0.983 - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
94. ulk4 ENSDARG00000004176 85 0.981 - - - - - - 0.981 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
95. si:dkeyp-86h10.3 ENSDARG00000095615 253 0.98 - - - - - - 0.980 - - si:dkeyp-86h10.3 [Source:ZFIN;Acc:ZDB-GENE-100922-65]
96. GSG2 GSG2 1162 0.98 - - - - - - 0.980 - -
97. si:ch211-174j14.2 ENSDARG00000093015 111 0.98 - - - - - - 0.980 - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
98. extl2 ENSDARG00000063191 118 0.98 - - - - - - 0.980 - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
99. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 0.979 - - - - - - 0.979 - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
100. si:ch211-259i2.2 si:ch211-259i2.2 45 0.979 - - - - - - 0.979 - -

There are 1337 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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