Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SYNPO

Gene Name Gene ID Reads Annotation
SYNPO 2 synaptopodin, transcript variant X2










Genes with expression patterns similar to SYNPO

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SYNPO 2 4 - - 1.000 - 1.000 - - 1.000 1.000 synaptopodin, transcript variant X2
2. si:ch1073-351l9.1 si:ch1073-351l9.1 1 2 - - - - 1.000 - - - 1.000
3. SSTR2 SSTR2 12 2 - - - - 1.000 - - - 1.000
4. ldlrap1b ENSDARG00000039750 2 2 - - 1.000 - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
5. si:dkey-276l13.5 si:dkey-276l13.5 3 2 - - - - 1.000 - - - 1.000
6. si:dkey-9i5.1 si:dkey-9i5.1 36 2 - - - - 1.000 - - - 1.000
7. wdr27 ENSDARG00000053386 2 2 - - - - 1.000 - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
8. GPT GPT 2 1.877 - - - - 0.877 - - - 1.000
9. ATP9A ENSDARG00000115869 9 1.757 - - - - 0.908 - - 0.849 - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
10. si:ch211-215m21.29 si:ch211-215m21.29 5 1.731 - - - - - - - 0.731 1.000
11. CR318624.1 ENSDARG00000094618 5 1.728 - - - - 0.728 - - - 1.000
12. CR391967.1 CR391967.1 135 1.706 - - 0.899 - - - - - 0.807
13. pomcb ENSDARG00000069307 72 1.673 - - 0.739 - - - - - 0.934 proopiomelanocortin b [Source:ZFIN;Acc:ZDB-GENE-041014-294]
14. TRIM8 TRIM8 5 1 - - - - - - - 1.000 -
15. BX000999.2 BX000999.2 2353 1 - - - - - - - 1.000 -
16. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
17. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
18. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
19. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
20. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
21. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
22. CR391962.2 CR391962.2 0 1 - - - - 1.000 - - - -
23. apba1a ENSDARG00000103848 0 1 - - - - - - - - 1.000 amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
24. U1_18 U1_18 0 1 - - - - 1.000 - - - -
25. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
26. gba ENSDARG00000076058 1 1 - - - - - - - - 1.000 glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
27. MEI1 MEI1 2 1 - - - - - - - - 1.000
28. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
29. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
30. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
31. si:ch73-335d12.1 si:ch73-335d12.1 1 1 - - - - 1.000 - - - -
32. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
33. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
34. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
35. CR457462.1 CR457462.1 11 1 - - - - - - - - 1.000
36. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
37. wisp2 ENSDARG00000077882 3 1 - - - - - - - - 1.000 WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
38. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
39. taar14l ENSDARG00000069213 11 1 - - - - 1.000 - - - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
40. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
41. htr5al htr5al 6 1 - - - - - - - - 1.000
42. psme2 ENSDARG00000033144 3 1 - - - - - - - 1.000 - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
43. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
44. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
45. usp47 ENSDARG00000102645 16 1 - - - - - - - 1.000 - ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
46. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
47. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - - 1.000 - - - -
48. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
49. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - - - - 1.000
50. sh2d1ab ENSDARG00000074854, ENSDARG00000115149 0 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate b [Source:ZFIN;Acc:ZDB-GENE-091204-326]
51. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
52. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
53. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
54. ZNF512B ENSDARG00000071055 7 1 - - - - - - - 1.000 - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
55. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
56. TMPRSS7 5 1 - - - - - - - - 1.000 transmembrane protease, serine 7
57. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
58. mvb12bb ENSDARG00000079478 9 1 - - - - - - - - 1.000 multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
59. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
60. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
61. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
62. CCDC66 2 1 - - - - - - - - 1.000 coiled-coil domain containing 66
63. si:dkey-240n22.3 ENSDARG00000095013 0 1 - - - - 1.000 - - - - si:dkey-240n22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-409]
64. CU570981.1 CU570981.1 9 1 - - - - 1.000 - - - -
65. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
66. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
67. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
68. LRCH4 ENSDARG00000068258 22 1 - - - - - - - 1.000 - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
69. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
70. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
71. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
72. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
73. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
74. syne3 ENSDARG00000023237 23 1 - - - - - - - 1.000 - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
75. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
76. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
77. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
78. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
79. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
80. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
81. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
82. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
83. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
84. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
85. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
86. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
87. DSEL DSEL 1 1 - - - - - - - - 1.000
88. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
89. trim66 ENSDARG00000054332 16 1 - - 1.000 - - - - - - tripartite motif containing 66 [Source:ZFIN;Acc:ZDB-GENE-040724-145]
90. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
91. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
92. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
93. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
94. ptx4 ENSDARG00000038072 2 1 - - - - - - - - 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
95. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
96. NPM2 NPM2 41 1 - - - - - - - - 1.000
97. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
98. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
99. MOB2 MOB2 4 1 - - - - 1.000 - - - -
100. ST6GALNAC2 4 1 - - - - - - - 1.000 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2

There are 442 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA